RNA–Protein interactions for RNA: ENST00000442510.6

PTPRC-209, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRC, Length 5,164 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-209ENST00000442510 NBPF1Q3BBV0 1214 aa6.94□□□□□ -1.3
PTPRC-209ENST00000442510 CENPJQ9HC77 1338 aaPredicted RBP6.94□□□□□ -1.3
PTPRC-209ENST00000442510 PES1O00541 588 aaKnown RBP6.94□□□□□ -1.3
PTPRC-209ENST00000442510 NRDCO43847 1150 aa6.94□□□□□ -1.3
PTPRC-209ENST00000442510 LRCH2Q5VUJ6 765 aa6.94□□□□□ -1.3
PTPRC-209ENST00000442510 UTP14CQ5TAP6 766 aaKnown RBP6.94□□□□□ -1.3
PTPRC-209ENST00000442510 DIAPH3Q9NSV4 1193 aa6.94□□□□□ -1.3
PTPRC-209ENST00000442510 ARMCX6Q7L4S7 300 aa6.94□□□□□ -1.3
PTPRC-209ENST00000442510 NPM1P06748 294 aaKnown RBP eCLIP6.93□□□□□ -1.3
PTPRC-209ENST00000442510 WASHC2CQ9Y4E1 1318 aa6.93□□□□□ -1.3
PTPRC-209ENST00000442510 DDX11L8A8MPP1 907 aa6.93□□□□□ -1.3
PTPRC-209ENST00000442510 DYNC1I1O14576 645 aa6.93□□□□□ -1.3
PTPRC-209ENST00000442510 CCDC91Q7Z6B0 441 aa6.93□□□□□ -1.3
PTPRC-209ENST00000442510 CT47A1Q5JQC4 288 aaPredicted RBP6.93□□□□□ -1.3
PTPRC-209ENST00000442510 TOMM22Q9NS69 142 aa6.93□□□□□ -1.3
PTPRC-209ENST00000442510 TMC1Q8TDI8 760 aa6.93□□□□□ -1.3
PTPRC-209ENST00000442510 CCDC34Q96HJ3 373 aa6.93□□□□□ -1.3
PTPRC-209ENST00000442510 CCDC94Q9BW85 323 aaPredicted RBP6.93□□□□□ -1.3
PTPRC-209ENST00000442510 CPSF2Q9P2I0 782 aaKnown RBP6.92□□□□□ -1.3
PTPRC-209ENST00000442510 PDCL2Q8N4E4 241 aa6.92□□□□□ -1.3
PTPRC-209ENST00000442510 CEP120Q8N960 986 aa6.92□□□□□ -1.3
PTPRC-209ENST00000442510 KNSTRNQ9Y448 316 aa6.91□□□□□ -1.3
PTPRC-209ENST00000442510 RGS22Q8NE09 1264 aa6.91□□□□□ -1.3
PTPRC-209ENST00000442510 TPM3P06753 285 aa6.91□□□□□ -1.3
PTPRC-209ENST00000442510 ZRSR1Q15695 479 aaKnown RBP6.91□□□□□ -1.3
PTPRC-209ENST00000442510 ISY1Q9ULR0 285 aaKnown RBP6.91□□□□□ -1.3
PTPRC-209ENST00000442510 PDE4AP27815 886 aa6.91□□□□□ -1.3
PTPRC-209ENST00000442510 SLC4A3P48751 1232 aa6.91□□□□□ -1.3
PTPRC-209ENST00000442510 DMTNQ08495 405 aa6.91□□□□□ -1.3
PTPRC-209ENST00000442510 SLC26A8Q96RN1 970 aa6.91□□□□□ -1.3
PTPRC-209ENST00000442510 FRAT2O75474 233 aaPredicted RBP6.9□□□□□ -1.3
PTPRC-209ENST00000442510 WASHC2AQ641Q2 1341 aa6.9□□□□□ -1.31
PTPRC-209ENST00000442510 CCDC173Q0VFZ6 552 aa6.9□□□□□ -1.31
PTPRC-209ENST00000442510 SKOR2Q2VWA4 1001 aaPredicted RBP6.9□□□□□ -1.31
PTPRC-209ENST00000442510 ZNF830Q96NB3 372 aaPredicted RBP6.9□□□□□ -1.31
PTPRC-209ENST00000442510 RAD21O60216 631 aa6.9□□□□□ -1.31
PTPRC-209ENST00000442510 ZSCAN30Q86W11 494 aa6.89□□□□□ -1.31
PTPRC-209ENST00000442510 HSCBQ8IWL3 235 aa6.89□□□□□ -1.31
PTPRC-209ENST00000442510 MRS2Q9HD23 443 aa6.89□□□□□ -1.31
PTPRC-209ENST00000442510 HMGB1P1B2RPK0 211 aaPredicted RBP6.89□□□□□ -1.31
PTPRC-209ENST00000442510 LMOD2Q6P5Q4 547 aa6.89□□□□□ -1.31
PTPRC-209ENST00000442510 LEKR1Q6ZMV7 388 aa6.89□□□□□ -1.31
PTPRC-209ENST00000442510 PUS7Q96PZ0 661 aaKnown RBP6.89□□□□□ -1.31
PTPRC-209ENST00000442510 IGSF3O75054 1194 aa6.89□□□□□ -1.31
PTPRC-209ENST00000442510 PLEKHD1A6NEE1 506 aa6.88□□□□□ -1.31
PTPRC-209ENST00000442510 CCER2I3L3R5 266 aa6.88□□□□□ -1.31
PTPRC-209ENST00000442510 HSP90AB1P08238 724 aaKnown RBP6.88□□□□□ -1.31
PTPRC-209ENST00000442510 ZNF853P0CG23 659 aa6.88□□□□□ -1.31
PTPRC-209ENST00000442510 ZRSR2Q15696 482 aaKnown RBP6.88□□□□□ -1.31
PTPRC-209ENST00000442510 SASS6Q6UVJ0 657 aa6.88□□□□□ -1.31
PTPRC-209ENST00000442510 DYDC1Q8WWB3 177 aa6.88□□□□□ -1.31
PTPRC-209ENST00000442510 RASSF4Q9H2L5 321 aa6.88□□□□□ -1.31
PTPRC-209ENST00000442510 SMC4Q9NTJ3 1288 aa6.88□□□□□ -1.31
PTPRC-209ENST00000442510 GOLGA6L19H0YKK7 550 aa6.88□□□□□ -1.31
PTPRC-209ENST00000442510 POLD1P28340 1107 aa6.88□□□□□ -1.31
PTPRC-209ENST00000442510 HDAC1Q13547 482 aaPredicted RBP6.88□□□□□ -1.31
PTPRC-209ENST00000442510 SPRYD3Q8NCJ5 442 aa6.88□□□□□ -1.31
PTPRC-209ENST00000442510 TMED8Q6PL24 325 aaPredicted RBP6.87□□□□□ -1.31
PTPRC-209ENST00000442510 NOL8Q76FK4 1167 aaKnown RBP6.87□□□□□ -1.31
PTPRC-209ENST00000442510 ZNF513Q8N8E2 541 aaPredicted RBP6.87□□□□□ -1.31
PTPRC-209ENST00000442510 AK7Q96M32 723 aa6.87□□□□□ -1.31
PTPRC-209ENST00000442510 RRAGDQ9NQL2 400 aaPredicted RBP6.87□□□□□ -1.31
PTPRC-209ENST00000442510 HSP90AB4PQ58FF6 505 aa6.87□□□□□ -1.31
PTPRC-209ENST00000442510 DRC7Q8IY82 874 aa6.87□□□□□ -1.31
PTPRC-209ENST00000442510 NBPF6Q5VWK0 638 aa6.87□□□□□ -1.31
PTPRC-209ENST00000442510 NBPF5PQ86XG9 351 aaPredicted RBP6.87□□□□□ -1.31
PTPRC-209ENST00000442510 NBPF4Q96M43 638 aa6.87□□□□□ -1.31
PTPRC-209ENST00000442510 NASPP49321 788 aaPredicted RBP6.86□□□□□ -1.31
PTPRC-209ENST00000442510 HIRIP3Q9BW71 556 aaPredicted RBP6.86□□□□□ -1.31
PTPRC-209ENST00000442510 EFCC1Q9HA90 598 aa6.86□□□□□ -1.31
PTPRC-209ENST00000442510 CCDC39Q9UFE4 941 aa6.86□□□□□ -1.31
PTPRC-209ENST00000442510 ANKRD20A12PQ8NF67 263 aa6.86□□□□□ -1.31
PTPRC-209ENST00000442510 NUCKS1Q9H1E3 243 aaKnown RBP6.86□□□□□ -1.31
PTPRC-209ENST00000442510 TTC36A6NLP5 189 aa6.86□□□□□ -1.31
PTPRC-209ENST00000442510 FAM43BQ6ZT52 329 aaPredicted RBP6.86□□□□□ -1.31
PTPRC-209ENST00000442510 AP1ARQ63HQ0 302 aa6.86□□□□□ -1.31
PTPRC-209ENST00000442510 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.85□□□□□ -1.31
PTPRC-209ENST00000442510 VGFO15240 615 aaPredicted RBP6.85□□□□□ -1.31
PTPRC-209ENST00000442510 SRPK2P78362 688 aaKnown RBP6.85□□□□□ -1.31
PTPRC-209ENST00000442510 SATB1Q01826 763 aa6.85□□□□□ -1.31
PTPRC-209ENST00000442510 RPAINQ86UA6 219 aa6.85□□□□□ -1.31
PTPRC-209ENST00000442510 GRPEL1Q9HAV7 217 aa6.85□□□□□ -1.31
PTPRC-209ENST00000442510 ARGLU1Q9NWB6 273 aaPredicted RBP6.85□□□□□ -1.31
PTPRC-209ENST00000442510 CEP83Q9Y592 693 aa6.85□□□□□ -1.31
PTPRC-209ENST00000442510 GOLGA6L10A6NI86 522 aa6.85□□□□□ -1.31
PTPRC-209ENST00000442510 HSPA5P11021 654 aaKnown RBP6.85□□□□□ -1.31
PTPRC-209ENST00000442510 MS4A1P11836 297 aa6.85□□□□□ -1.31
PTPRC-209ENST00000442510 MAP2K1Q02750 393 aaPredicted RBP6.85□□□□□ -1.31
PTPRC-209ENST00000442510 MPNDQ8N594 471 aa6.85□□□□□ -1.31
PTPRC-209ENST00000442510 DZIP1Q86YF9 867 aaKnown RBP6.84□□□□□ -1.31
PTPRC-209ENST00000442510 SPDYE4A6NLX3 237 aa6.84□□□□□ -1.31
PTPRC-209ENST00000442510 MNAT1P51948 309 aa6.84□□□□□ -1.31
PTPRC-209ENST00000442510 TPM4P67936 248 aa6.84□□□□□ -1.31
PTPRC-209ENST00000442510 WDR78Q5VTH9 848 aa6.84□□□□□ -1.31
PTPRC-209ENST00000442510 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.84□□□□□ -1.31
PTPRC-209ENST00000442510 DNAAF4Q8WXU2 420 aa6.84□□□□□ -1.31
PTPRC-209ENST00000442510 SYAP1Q96A49 352 aaPredicted RBP6.84□□□□□ -1.31
PTPRC-209ENST00000442510 GOLGA6L4A6NEF3 574 aa6.83□□□□□ -1.32
PTPRC-209ENST00000442510 ZNF500O60304 480 aaPredicted RBP6.83□□□□□ -1.32
PTPRC-209ENST00000442510 BAZ1BQ9UIG0 1483 aaKnown RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms