RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 EIF2AK4Q9P2K8 1649 aaKnown RBP8.48□□□□□ -1.05
VPS50-205ENST00000441602 MLH3Q9UHC1 1453 aa8.48□□□□□ -1.05
VPS50-205ENST00000441602 KIF3BO15066 747 aa8.48□□□□□ -1.05
VPS50-205ENST00000441602 FAM69CQ0P6D2 419 aa8.48□□□□□ -1.05
VPS50-205ENST00000441602 A2MP01023 1474 aa8.47□□□□□ -1.05
VPS50-205ENST00000441602 HECW2Q9P2P5 1572 aa8.46□□□□□ -1.05
VPS50-205ENST00000441602 KDM5CP41229 1560 aa8.46□□□□□ -1.06
VPS50-205ENST00000441602 CENPBP07199 599 aaPredicted RBP8.45□□□□□ -1.06
VPS50-205ENST00000441602 STAC3Q96MF2 364 aa8.45□□□□□ -1.06
VPS50-205ENST00000441602 MAP3K4Q9Y6R4 1608 aa8.45□□□□□ -1.06
VPS50-205ENST00000441602 ATP10AO60312 1499 aa8.45□□□□□ -1.06
VPS50-205ENST00000441602 ZNF326Q5BKZ1 582 aaKnown RBP8.44□□□□□ -1.06
VPS50-205ENST00000441602 TET3O43151 1660 aa8.43□□□□□ -1.06
VPS50-205ENST00000441602 HSPA5P11021 654 aaKnown RBP8.43□□□□□ -1.06
VPS50-205ENST00000441602 UHRF1BP1Q6BDS2 1440 aa8.43□□□□□ -1.06
VPS50-205ENST00000441602 DIP2BQ9P265 1576 aa8.43□□□□□ -1.06
VPS50-205ENST00000441602 DEPDC5O75140 1603 aa8.43□□□□□ -1.06
VPS50-205ENST00000441602 KIDINS220Q9ULH0 1771 aa8.42□□□□□ -1.06
VPS50-205ENST00000441602 PRDM15P57071 1507 aaPredicted RBP8.42□□□□□ -1.06
VPS50-205ENST00000441602 DCAF11Q8TEB1 546 aa8.42□□□□□ -1.06
VPS50-205ENST00000441602 MIER1Q8N108 512 aa8.41□□□□□ -1.06
VPS50-205ENST00000441602 KDM2AQ9Y2K7 1162 aa8.41□□□□□ -1.06
VPS50-205ENST00000441602 RALGAPBQ86X10 1494 aa8.41□□□□□ -1.06
VPS50-205ENST00000441602 ANP32CO43423 234 aa8.41□□□□□ -1.06
VPS50-205ENST00000441602 DDX10Q13206 875 aaKnown RBP8.41□□□□□ -1.06
VPS50-205ENST00000441602 NBPF8Q3BBV2 869 aa8.41□□□□□ -1.06
VPS50-205ENST00000441602 VWDEQ8N2E2 1590 aa8.41□□□□□ -1.06
VPS50-205ENST00000441602 LMTK2Q8IWU2 1503 aa8.41□□□□□ -1.06
VPS50-205ENST00000441602 RNF17Q9BXT8 1623 aaKnown RBP8.4□□□□□ -1.06
VPS50-205ENST00000441602 TRPM2O94759 1503 aa8.4□□□□□ -1.06
VPS50-205ENST00000441602 RAPGEF3O95398 923 aa8.4□□□□□ -1.06
VPS50-205ENST00000441602 CARD11Q9BXL7 1154 aa8.39□□□□□ -1.07
VPS50-205ENST00000441602 PTPRTO14522 1441 aa8.39□□□□□ -1.07
VPS50-205ENST00000441602 RGL3Q3MIN7 710 aa8.39□□□□□ -1.07
VPS50-205ENST00000441602 GGT6Q6P531 493 aa8.39□□□□□ -1.07
VPS50-205ENST00000441602 WASHC2CQ9Y4E1 1318 aa8.39□□□□□ -1.07
VPS50-205ENST00000441602 ZMYM4Q5VZL5 1548 aa8.39□□□□□ -1.07
VPS50-205ENST00000441602 PLA2R1Q13018 1463 aa8.38□□□□□ -1.07
VPS50-205ENST00000441602 ARID4BQ4LE39 1312 aaPredicted RBP8.38□□□□□ -1.07
VPS50-205ENST00000441602 USP47Q96K76 1375 aa8.38□□□□□ -1.07
VPS50-205ENST00000441602 EFCAB6Q5THR3 1501 aa8.38□□□□□ -1.07
VPS50-205ENST00000441602 BCORL1Q5H9F3 1711 aa8.38□□□□□ -1.07
VPS50-205ENST00000441602 HIRIP3Q9BW71 556 aaPredicted RBP8.38□□□□□ -1.07
VPS50-205ENST00000441602 PPP6R1Q9UPN7 881 aa8.38□□□□□ -1.07
VPS50-205ENST00000441602 ROCK2O75116 1388 aaKnown RBP8.38□□□□□ -1.07
VPS50-205ENST00000441602 DIP2CQ9Y2E4 1556 aa8.38□□□□□ -1.07
VPS50-205ENST00000441602 ABCA6Q8N139 1617 aa8.37□□□□□ -1.07
VPS50-205ENST00000441602 RICTORQ6R327 1708 aa8.37□□□□□ -1.07
VPS50-205ENST00000441602 E9PCH4 1651 aa8.37□□□□□ -1.07
VPS50-205ENST00000441602 SPHKAPQ2M3C7 1700 aa8.37□□□□□ -1.07
VPS50-205ENST00000441602 PRAG1Q86YV5 1406 aa8.36□□□□□ -1.07
VPS50-205ENST00000441602 NEURL4Q96JN8 1562 aa8.36□□□□□ -1.07
VPS50-205ENST00000441602 CNTLNQ9NXG0 1405 aa8.36□□□□□ -1.07
VPS50-205ENST00000441602 MROH1Q8NDA8 1641 aa8.36□□□□□ -1.07
VPS50-205ENST00000441602 CCDC7Q96M83 1385 aa8.36□□□□□ -1.07
VPS50-205ENST00000441602 FRMPD1Q5SYB0 1578 aa8.35□□□□□ -1.07
VPS50-205ENST00000441602 ESF1Q9H501 851 aaKnown RBP8.35□□□□□ -1.07
VPS50-205ENST00000441602 ZC3H13Q5T200 1668 aaKnown RBP8.35□□□□□ -1.07
VPS50-205ENST00000441602 SPATA31E1Q6ZUB1 1445 aa8.35□□□□□ -1.07
VPS50-205ENST00000441602 ABCC3O15438 1527 aa8.34□□□□□ -1.07
VPS50-205ENST00000441602 CCER2I3L3R5 266 aa8.34□□□□□ -1.07
VPS50-205ENST00000441602 SLC24A1O60721 1099 aa8.34□□□□□ -1.07
VPS50-205ENST00000441602 REREQ9P2R6 1566 aa8.34□□□□□ -1.07
VPS50-205ENST00000441602 CHGAP10645 457 aaKnown RBP8.34□□□□□ -1.07
VPS50-205ENST00000441602 RPGRIP1LQ68CZ1 1315 aa8.34□□□□□ -1.08
VPS50-205ENST00000441602 TSPOAP1O95153 1857 aa8.34□□□□□ -1.08
VPS50-205ENST00000441602 ARHGAP31Q2M1Z3 1444 aa8.34□□□□□ -1.08
VPS50-205ENST00000441602 YEATS2Q9ULM3 1422 aa8.34□□□□□ -1.08
VPS50-205ENST00000441602 AGLP35573 1532 aa8.33□□□□□ -1.08
VPS50-205ENST00000441602 GPRASP1Q5JY77 1395 aa8.33□□□□□ -1.08
VPS50-205ENST00000441602 CEP152O94986 1710 aa8.33□□□□□ -1.08
VPS50-205ENST00000441602 PPRC1Q5VV67 1664 aaKnown RBP8.33□□□□□ -1.08
VPS50-205ENST00000441602 CLTCL1P53675 1640 aa8.33□□□□□ -1.08
VPS50-205ENST00000441602 LAMC1P11047 1609 aa8.32□□□□□ -1.08
VPS50-205ENST00000441602 EIF3AQ14152 1382 aaKnown RBP8.32□□□□□ -1.08
VPS50-205ENST00000441602 WASHC2AQ641Q2 1341 aa8.32□□□□□ -1.08
VPS50-205ENST00000441602 POLR3GLQ9BT43 218 aa8.32□□□□□ -1.08
VPS50-205ENST00000441602 YTHDC1Q96MU7 727 aaKnown RBP8.31□□□□□ -1.08
VPS50-205ENST00000441602 SLC52A1Q9NWF4 448 aa8.31□□□□□ -1.08
VPS50-205ENST00000441602 NPATQ14207 1427 aa8.31□□□□□ -1.08
VPS50-205ENST00000441602 CDCA8Q53HL2 280 aa8.31□□□□□ -1.08
VPS50-205ENST00000441602 KIF1BO60333 1816 aa8.31□□□□□ -1.08
VPS50-205ENST00000441602 MYOM2P54296 1465 aa8.31□□□□□ -1.08
VPS50-205ENST00000441602 CAMSAP1Q5T5Y3 1602 aa8.31□□□□□ -1.08
VPS50-205ENST00000441602 KIF7Q2M1P5 1343 aa8.31□□□□□ -1.08
VPS50-205ENST00000441602 TRPM1Q7Z4N2 1603 aa8.31□□□□□ -1.08
VPS50-205ENST00000441602 ARHGEF40Q8TER5 1519 aa8.3□□□□□ -1.08
VPS50-205ENST00000441602 TMF1P82094 1093 aa8.3□□□□□ -1.08
VPS50-205ENST00000441602 NOS1P29475 1434 aa8.29□□□□□ -1.08
VPS50-205ENST00000441602 KIF13AQ9H1H9 1805 aa8.29□□□□□ -1.08
VPS50-205ENST00000441602 ST20-MTHFSA0A0A6YYL1 179 aa8.29□□□□□ -1.08
VPS50-205ENST00000441602 POLR1AO95602 1720 aaPredicted RBP8.28□□□□□ -1.08
VPS50-205ENST00000441602 VGFO15240 615 aaPredicted RBP8.28□□□□□ -1.08
VPS50-205ENST00000441602 STAG3Q9UJ98 1225 aa8.28□□□□□ -1.08
VPS50-205ENST00000441602 MADDQ8WXG6 1647 aa8.28□□□□□ -1.08
VPS50-205ENST00000441602 ADGRB3O60242 1522 aa8.28□□□□□ -1.08
VPS50-205ENST00000441602 SCAF11Q99590 1463 aaKnown RBP8.27□□□□□ -1.08
VPS50-205ENST00000441602 TRHP20396 242 aaPredicted RBP8.27□□□□□ -1.09
VPS50-205ENST00000441602 KIAA1210Q9ULL0 1709 aa8.27□□□□□ -1.09
VPS50-205ENST00000441602 NBPF1Q3BBV0 1214 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms