RNA–Protein interactions for RNA: ENST00000441090.6

LRCH3-207, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2 BASIC

Gene LRCH3, Length 2,034 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-207ENST00000441090 NEFLP07196 543 aa25.95■■□□□ 1.74
LRCH3-207ENST00000441090 DCAF11Q8TEB1 546 aa25.95■■□□□ 1.74
LRCH3-207ENST00000441090 CARD11Q9BXL7 1154 aa25.95■■□□□ 1.74
LRCH3-207ENST00000441090 ARAP3Q8WWN8 1544 aa25.95■■□□□ 1.74
LRCH3-207ENST00000441090 DHX29Q7Z478 1369 aaKnown RBP25.95■■□□□ 1.74
LRCH3-207ENST00000441090 TRPM1Q7Z4N2 1603 aa25.95■■□□□ 1.74
LRCH3-207ENST00000441090 PLA2R1Q13018 1463 aa25.94■■□□□ 1.74
LRCH3-207ENST00000441090 KDM2AQ9Y2K7 1162 aa25.92■■□□□ 1.74
LRCH3-207ENST00000441090 ROCK2O75116 1388 aaKnown RBP25.9■■□□□ 1.74
LRCH3-207ENST00000441090 MRS2Q9HD23 443 aa25.9■■□□□ 1.74
LRCH3-207ENST00000441090 PRAG1Q86YV5 1406 aa25.89■■□□□ 1.74
LRCH3-207ENST00000441090 ATP10AO60312 1499 aa25.89■■□□□ 1.74
LRCH3-207ENST00000441090 TRAPPC8Q9Y2L5 1435 aa25.89■■□□□ 1.73
LRCH3-207ENST00000441090 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.88■■□□□ 1.731e-7■■□□□ 14.2
LRCH3-207ENST00000441090 BCANQ96GW7 911 aa25.86■■□□□ 1.73
LRCH3-207ENST00000441090 A2MP01023 1474 aa25.85■■□□□ 1.73
LRCH3-207ENST00000441090 LAMC1P11047 1609 aa25.85■■□□□ 1.73
LRCH3-207ENST00000441090 E9PCH4 1651 aa25.84■■□□□ 1.73
LRCH3-207ENST00000441090 WDR7Q9Y4E6 1490 aa25.84■■□□□ 1.73
LRCH3-207ENST00000441090 RTEL1-TNFRSF6BF6WH68 1400 aa25.84■■□□□ 1.73
LRCH3-207ENST00000441090 ZFYVE16Q7Z3T8 1539 aa25.83■■□□□ 1.73
LRCH3-207ENST00000441090 ST20-MTHFSA0A0A6YYL1 179 aa25.83■■□□□ 1.73
LRCH3-207ENST00000441090 FAM9BQ8IZU0 186 aa25.83■■□□□ 1.73
LRCH3-207ENST00000441090 POLR3GLQ9BT43 218 aa25.83■■□□□ 1.73
LRCH3-207ENST00000441090 ABCA9Q8IUA7 1624 aa25.82■■□□□ 1.72
LRCH3-207ENST00000441090 EIF2AK4Q9P2K8 1649 aaKnown RBP25.81■■□□□ 1.72
LRCH3-207ENST00000441090 GPRASP1Q5JY77 1395 aa25.79■■□□□ 1.72
LRCH3-207ENST00000441090 ZBED9Q6R2W3 1325 aa25.79■■□□□ 1.72
LRCH3-207ENST00000441090 SPAG9O60271 1321 aaKnown RBP25.77■■□□□ 1.72
LRCH3-207ENST00000441090 DEPDC5O75140 1603 aa25.77■■□□□ 1.72
LRCH3-207ENST00000441090 RGL3Q3MIN7 710 aa25.76■■□□□ 1.72
LRCH3-207ENST00000441090 PRDM15P57071 1507 aaPredicted RBP25.76■■□□□ 1.71
LRCH3-207ENST00000441090 INO80Q9ULG1 1556 aaPredicted RBP25.75■■□□□ 1.71
LRCH3-207ENST00000441090 FANCAO15360 1455 aa25.73■■□□□ 1.71
LRCH3-207ENST00000441090 TSHZ2Q9NRE2 1034 aa25.73■■□□□ 1.71
LRCH3-207ENST00000441090 AFAP1Q8N556 730 aa25.71■■□□□ 1.71
LRCH3-207ENST00000441090 ATP7AQ04656 1500 aa25.71■■□□□ 1.71
LRCH3-207ENST00000441090 SPHKAPQ2M3C7 1700 aa25.71■■□□□ 1.71
LRCH3-207ENST00000441090 RNF17Q9BXT8 1623 aaKnown RBP25.7■■□□□ 1.71
LRCH3-207ENST00000441090 CEP152O94986 1710 aa25.7■■□□□ 1.7
LRCH3-207ENST00000441090 NBPF1Q3BBV0 1214 aa25.7■■□□□ 1.7
LRCH3-207ENST00000441090 TRPM2O94759 1503 aa25.69■■□□□ 1.7
LRCH3-207ENST00000441090 TET3O43151 1660 aa25.68■■□□□ 1.7
LRCH3-207ENST00000441090 KTN1Q86UP2 1357 aaKnown RBP25.68■■□□□ 1.7
LRCH3-207ENST00000441090 COL17A1Q9UMD9 1497 aaPredicted RBP25.65■■□□□ 1.7
LRCH3-207ENST00000441090 VWDEQ8N2E2 1590 aa25.65■■□□□ 1.7
LRCH3-207ENST00000441090 ADGRL1O94910 1474 aa25.64■■□□□ 1.7
LRCH3-207ENST00000441090 ASXL2Q76L83 1435 aa25.64■■□□□ 1.69
LRCH3-207ENST00000441090 PTPRTO14522 1441 aa25.63■■□□□ 1.69
LRCH3-207ENST00000441090 CNGB1Q14028 1251 aaPredicted RBP25.63■■□□□ 1.69
LRCH3-207ENST00000441090 MADDQ8WXG6 1647 aa25.63■■□□□ 1.69
LRCH3-207ENST00000441090 CLTCL1P53675 1640 aa25.61■■□□□ 1.69
LRCH3-207ENST00000441090 RALBP1Q15311 655 aa25.6■■□□□ 1.69
LRCH3-207ENST00000441090 SCAPERQ9BY12 1400 aa25.6■■□□□ 1.69
LRCH3-207ENST00000441090 ERICH6BQ5W0A0 696 aa25.59■■□□□ 1.69
LRCH3-207ENST00000441090 PNISRQ8TF01 805 aaKnown RBP25.59■■□□□ 1.69
LRCH3-207ENST00000441090 TESK2Q96S53 571 aa25.59■■□□□ 1.69
LRCH3-207ENST00000441090 BRD4O60885 1362 aaPredicted RBP25.58■■□□□ 1.69
LRCH3-207ENST00000441090 MYBBP1AQ9BQG0 1328 aaKnown RBP25.58■■□□□ 1.69
LRCH3-207ENST00000441090 MROH1Q8NDA8 1641 aa25.57■■□□□ 1.68
LRCH3-207ENST00000441090 TMC1Q8TDI8 760 aa25.57■■□□□ 1.68
LRCH3-207ENST00000441090 IQGAP1P46940 1657 aa25.57■■□□□ 1.68
LRCH3-207ENST00000441090 KANK1Q14678 1352 aa25.57■■□□□ 1.68
LRCH3-207ENST00000441090 DISP3Q9P2K9 1392 aa25.55■■□□□ 1.68
LRCH3-207ENST00000441090 KIDINS220Q9ULH0 1771 aa25.55■■□□□ 1.68
LRCH3-207ENST00000441090 IRX6P78412 446 aaPredicted RBP25.54■■□□□ 1.68
LRCH3-207ENST00000441090 LRPPRCP42704 1394 aaKnown RBP25.54■■□□□ 1.68
LRCH3-207ENST00000441090 SMG6Q86US8 1419 aaKnown RBP25.54■■□□□ 1.68
LRCH3-207ENST00000441090 NEURL4Q96JN8 1562 aa25.54■■□□□ 1.68
LRCH3-207ENST00000441090 PARD3Q8TEW0 1356 aa25.53■■□□□ 1.68
LRCH3-207ENST00000441090 STAC3Q96MF2 364 aa25.53■■□□□ 1.68
LRCH3-207ENST00000441090 PER1O15534 1290 aaPredicted RBP25.51■■□□□ 1.67
LRCH3-207ENST00000441090 KIF3BO15066 747 aa25.49■■□□□ 1.67
LRCH3-207ENST00000441090 CFAP74Q9C0B2 1584 aa25.49■■□□□ 1.67
LRCH3-207ENST00000441090 TMF1P82094 1093 aa25.49■■□□□ 1.67
LRCH3-207ENST00000441090 KIAA1210Q9ULL0 1709 aa25.48■■□□□ 1.67
LRCH3-207ENST00000441090 WASHC2CQ9Y4E1 1318 aa25.48■■□□□ 1.67
LRCH3-207ENST00000441090 ZNF518AQ6AHZ1 1483 aa25.48■■□□□ 1.67
LRCH3-207ENST00000441090 MYT1LQ9UL68 1186 aa25.47■■□□□ 1.67
LRCH3-207ENST00000441090 EFCAB6Q5THR3 1501 aa25.46■■□□□ 1.67
LRCH3-207ENST00000441090 OSCARQ8IYS5 282 aa25.46■■□□□ 1.67
LRCH3-207ENST00000441090 KIF1BO60333 1816 aa25.46■■□□□ 1.67
LRCH3-207ENST00000441090 NLRP13Q86W25 1043 aa25.45■■□□□ 1.66
LRCH3-207ENST00000441090 NUDCQ9Y266 331 aa25.45■■□□□ 1.66
LRCH3-207ENST00000441090 PPP4R2Q9NY27 417 aa25.44■■□□□ 1.66
LRCH3-207ENST00000441090 NPM1P06748 294 aaKnown RBP eCLIP25.43■■□□□ 1.66
LRCH3-207ENST00000441090 SCAF11Q99590 1463 aaKnown RBP25.43■■□□□ 1.66
LRCH3-207ENST00000441090 PPRC1Q5VV67 1664 aaKnown RBP25.42■■□□□ 1.66
LRCH3-207ENST00000441090 LMTK2Q8IWU2 1503 aa25.42■■□□□ 1.66
LRCH3-207ENST00000441090 IFT172Q9UG01 1749 aa25.41■■□□□ 1.66
LRCH3-207ENST00000441090 PANK3Q9H999 370 aa25.39■■□□□ 1.66
LRCH3-207ENST00000441090 MAP3K4Q9Y6R4 1608 aa25.39■■□□□ 1.66
LRCH3-207ENST00000441090 CD109Q6YHK3 1445 aa25.38■■□□□ 1.65
LRCH3-207ENST00000441090 MYOM2P54296 1465 aa25.38■■□□□ 1.65
LRCH3-207ENST00000441090 UGGT1Q9NYU2 1555 aa25.38■■□□□ 1.65
LRCH3-207ENST00000441090 POGZQ7Z3K3 1410 aa25.37■■□□□ 1.65
LRCH3-207ENST00000441090 MROH2AA6NES4 1674 aa25.36■■□□□ 1.65
LRCH3-207ENST00000441090 RNF123Q5XPI4 1314 aa25.36■■□□□ 1.65
LRCH3-207ENST00000441090 SYNMO15061 1565 aa25.35■■□□□ 1.65
LRCH3-207ENST00000441090 HECW2Q9P2P5 1572 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms