RNA–Protein interactions for RNA: ENST00000440915.1

AP004290.1-201, humanhuman

BASIC

Gene AP004290.1, Length 1,412 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004290.1-201ENST00000440915 TRIM52Q96A61 297 aa15.24■□□□□ 0.03
AP004290.1-201ENST00000440915 DHX57Q6P158 1386 aaKnown RBP15.23■□□□□ 0.03
AP004290.1-201ENST00000440915 ATP10AO60312 1499 aa15.22■□□□□ 0.03
AP004290.1-201ENST00000440915 EIF2AK4Q9P2K8 1649 aaKnown RBP15.22■□□□□ 0.03
AP004290.1-201ENST00000440915 CCER1Q8TC90 406 aaPredicted RBP15.21■□□□□ 0.03
AP004290.1-201ENST00000440915 ARHGEF40Q8TER5 1519 aa15.21■□□□□ 0.03
AP004290.1-201ENST00000440915 UNC13BO14795 1591 aa15.2■□□□□ 0.02
AP004290.1-201ENST00000440915 KIF3BO15066 747 aa15.19■□□□□ 0.02
AP004290.1-201ENST00000440915 REREQ9P2R6 1566 aa15.19■□□□□ 0.02
AP004290.1-201ENST00000440915 KDM5DQ9BY66 1539 aa15.19■□□□□ 0.02
AP004290.1-201ENST00000440915 BCORL1Q5H9F3 1711 aa15.18■□□□□ 0.02
AP004290.1-201ENST00000440915 NUP155O75694 1391 aa15.17■□□□□ 0.02
AP004290.1-201ENST00000440915 DEPDC5O75140 1603 aa15.17■□□□□ 0.02
AP004290.1-201ENST00000440915 PZPP20742 1482 aa15.17■□□□□ 0.02
AP004290.1-201ENST00000440915 MPHOSPH9Q99550 1183 aa15.17■□□□□ 0.02
AP004290.1-201ENST00000440915 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.17■□□□□ 0.02
AP004290.1-201ENST00000440915 RNF17Q9BXT8 1623 aaKnown RBP15.15■□□□□ 0.02
AP004290.1-201ENST00000440915 SLC4A1APQ9BWU0 796 aaKnown RBP15.15■□□□□ 0.02
AP004290.1-201ENST00000440915 MROH1Q8NDA8 1641 aa15.14■□□□□ 0.01
AP004290.1-201ENST00000440915 AGLP35573 1532 aa15.14■□□□□ 0.01
AP004290.1-201ENST00000440915 IQGAP3Q86VI3 1631 aa15.14■□□□□ 0.01
AP004290.1-201ENST00000440915 PRDM15P57071 1507 aaPredicted RBP15.13■□□□□ 0.01
AP004290.1-201ENST00000440915 FAM135AQ9P2D6 1515 aa15.13■□□□□ 0.01
AP004290.1-201ENST00000440915 SIGLEC1Q9BZZ2 1709 aa15.13■□□□□ 0.01
AP004290.1-201ENST00000440915 GGT6Q6P531 493 aa15.12■□□□□ 0.01
AP004290.1-201ENST00000440915 KANK1Q14678 1352 aa15.12■□□□□ 0.01
AP004290.1-201ENST00000440915 VWDEQ8N2E2 1590 aa15.12■□□□□ 0.01
AP004290.1-201ENST00000440915 CLSPNQ9HAW4 1339 aa15.1■□□□□ 0.01
AP004290.1-201ENST00000440915 PKD2Q13563 968 aa15.09■□□□□ 0.01
AP004290.1-201ENST00000440915 LMTK2Q8IWU2 1503 aa15.07■□□□□ 0
AP004290.1-201ENST00000440915 TET3O43151 1660 aa15.06■□□□□ 0
AP004290.1-201ENST00000440915 CEP152O94986 1710 aa15.06■□□□□ 0
AP004290.1-201ENST00000440915 ABCC3O15438 1527 aa15.05■□□□□ -0
AP004290.1-201ENST00000440915 ARID4BQ4LE39 1312 aaPredicted RBP15.05■□□□□ -0
AP004290.1-201ENST00000440915 WASHC2CQ9Y4E1 1318 aa15.05■□□□□ -0
AP004290.1-201ENST00000440915 MLECQ14165 292 aa15.04■□□□□ -0
AP004290.1-201ENST00000440915 ZC3H13Q5T200 1668 aaKnown RBP15.04■□□□□ -0
AP004290.1-201ENST00000440915 ANKRD30BQ9BXX2 1392 aa15.03■□□□□ -0
AP004290.1-201ENST00000440915 E9PCH4 1651 aa15.03■□□□□ -0
AP004290.1-201ENST00000440915 EFCAB6Q5THR3 1501 aa15.02■□□□□ -0
AP004290.1-201ENST00000440915 SIN3AQ96ST3 1273 aa15.01□□□□□ -0.01
AP004290.1-201ENST00000440915 CAMSAP1Q5T5Y3 1602 aa15.01□□□□□ -0.01
AP004290.1-201ENST00000440915 ZEB1P37275 1124 aaPredicted RBP15□□□□□ -0.01
AP004290.1-201ENST00000440915 CLTCQ00610 1675 aaKnown RBP14.99□□□□□ -0.01
AP004290.1-201ENST00000440915 NEUROD1Q13562 356 aa14.99□□□□□ -0.01
AP004290.1-201ENST00000440915 ARHGAP31Q2M1Z3 1444 aa14.98□□□□□ -0.01
AP004290.1-201ENST00000440915 PLA2R1Q13018 1463 aa14.97□□□□□ -0.01
AP004290.1-201ENST00000440915 RPRD2Q5VT52 1461 aaKnown RBP14.97□□□□□ -0.01
AP004290.1-201ENST00000440915 NPATQ14207 1427 aa14.97□□□□□ -0.01
AP004290.1-201ENST00000440915 ESF1Q9H501 851 aaKnown RBP14.97□□□□□ -0.01
AP004290.1-201ENST00000440915 PTPRTO14522 1441 aa14.96□□□□□ -0.01
AP004290.1-201ENST00000440915 SPHKAPQ2M3C7 1700 aa14.95□□□□□ -0.02
AP004290.1-201ENST00000440915 PPP4R3CPQ6ZMV5 832 aa14.94□□□□□ -0.02
AP004290.1-201ENST00000440915 TRPM2O94759 1503 aa14.94□□□□□ -0.02
AP004290.1-201ENST00000440915 CNTLNQ9NXG0 1405 aa14.94□□□□□ -0.02
AP004290.1-201ENST00000440915 CCDC144AA2RUR9 1427 aa14.92□□□□□ -0.02
AP004290.1-201ENST00000440915 ZMYM3Q14202 1370 aa14.92□□□□□ -0.02
AP004290.1-201ENST00000440915 FER1L4A9Z1Z3 1794 aa14.92□□□□□ -0.02
AP004290.1-201ENST00000440915 MROH2AA6NES4 1674 aa14.92□□□□□ -0.02
AP004290.1-201ENST00000440915 NOS1P29475 1434 aa14.91□□□□□ -0.02
AP004290.1-201ENST00000440915 TIMELESSQ9UNS1 1208 aa14.91□□□□□ -0.02
AP004290.1-201ENST00000440915 PREX1Q8TCU6 1659 aa14.9□□□□□ -0.02
AP004290.1-201ENST00000440915 CLTCL1P53675 1640 aa14.9□□□□□ -0.02
AP004290.1-201ENST00000440915 ADAMTSL3P82987 1691 aa14.9□□□□□ -0.02
AP004290.1-201ENST00000440915 CFAP65Q6ZU64 1925 aaKnown RBP14.89□□□□□ -0.03
AP004290.1-201ENST00000440915 TONSLQ96HA7 1378 aa14.89□□□□□ -0.03
AP004290.1-201ENST00000440915 FBXO31Q5XUX0 539 aaPredicted RBP14.89□□□□□ -0.03
AP004290.1-201ENST00000440915 ERVK-7P63135 1459 aa14.89□□□□□ -0.03
AP004290.1-201ENST00000440915 SYNMO15061 1565 aa14.88□□□□□ -0.03
AP004290.1-201ENST00000440915 MADDQ8WXG6 1647 aa14.88□□□□□ -0.03
AP004290.1-201ENST00000440915 UGGT1Q9NYU2 1555 aa14.88□□□□□ -0.03
AP004290.1-201ENST00000440915 SPATA31D1Q6ZQQ2 1576 aa14.87□□□□□ -0.03
AP004290.1-201ENST00000440915 C3P01024 1663 aa14.85□□□□□ -0.03
AP004290.1-201ENST00000440915 RIMS1Q86UR5 1692 aaKnown RBP14.85□□□□□ -0.03
AP004290.1-201ENST00000440915 PIK3C2BO00750 1634 aa14.85□□□□□ -0.03
AP004290.1-201ENST00000440915 L3MBTL2Q969R5 705 aa14.84□□□□□ -0.03
AP004290.1-201ENST00000440915 CEBPAP49715 358 aaPredicted RBP14.83□□□□□ -0.03
AP004290.1-201ENST00000440915 SPATA31E1Q6ZUB1 1445 aa14.83□□□□□ -0.04
AP004290.1-201ENST00000440915 SLC52A1Q9NWF4 448 aa14.83□□□□□ -0.04
AP004290.1-201ENST00000440915 KIF1BO60333 1816 aa14.82□□□□□ -0.04
AP004290.1-201ENST00000440915 PPP1R15AO75807 674 aaPredicted RBP14.82□□□□□ -0.04
AP004290.1-201ENST00000440915 IDI1Q13907 227 aa14.82□□□□□ -0.04
AP004290.1-201ENST00000440915 NEURL4Q96JN8 1562 aa14.81□□□□□ -0.04
AP004290.1-201ENST00000440915 RGL3Q3MIN7 710 aa14.81□□□□□ -0.04
AP004290.1-201ENST00000440915 TNRQ92752 1358 aa14.8□□□□□ -0.04
AP004290.1-201ENST00000440915 CHGAP10645 457 aaKnown RBP14.79□□□□□ -0.04
AP004290.1-201ENST00000440915 MAPK8IP2Q13387 824 aaPredicted RBP14.79□□□□□ -0.04
AP004290.1-201ENST00000440915 ADGRB3O60242 1522 aa14.79□□□□□ -0.04
AP004290.1-201ENST00000440915 DCAF11Q8TEB1 546 aa14.78□□□□□ -0.04
AP004290.1-201ENST00000440915 PTPRMP28827 1452 aa14.76□□□□□ -0.05
AP004290.1-201ENST00000440915 TMEM131LA2VDJ0 1609 aa14.76□□□□□ -0.05
AP004290.1-201ENST00000440915 SCAF1Q9H7N4 1312 aaKnown RBP14.76□□□□□ -0.05
AP004290.1-201ENST00000440915 ZNF326Q5BKZ1 582 aaKnown RBP14.75□□□□□ -0.05
AP004290.1-201ENST00000440915 KDM2AQ9Y2K7 1162 aa14.75□□□□□ -0.05
AP004290.1-201ENST00000440915 NLRP1Q9C000 1473 aa14.75□□□□□ -0.05
AP004290.1-201ENST00000440915 KDM4FA0A1W2PPD8 638 aa14.74□□□□□ -0.05
AP004290.1-201ENST00000440915 STAG3Q9UJ98 1225 aa14.74□□□□□ -0.05
AP004290.1-201ENST00000440915 RPGRIP1LQ68CZ1 1315 aa14.73□□□□□ -0.05
AP004290.1-201ENST00000440915 NBPF8Q3BBV2 869 aa14.73□□□□□ -0.05
AP004290.1-201ENST00000440915 MYO5BQ9ULV0 1848 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms