RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 EIF2AK4Q9P2K8 1649 aaKnown RBP9.57□□□□□ -0.88
PTPRR-204ENST00000440835 EHMT2Q96KQ7 1210 aa9.56□□□□□ -0.88
PTPRR-204ENST00000440835 PZPP20742 1482 aa9.56□□□□□ -0.88
PTPRR-204ENST00000440835 NLRP1Q9C000 1473 aa9.56□□□□□ -0.88
PTPRR-204ENST00000440835 CPS1P31327 1500 aa9.56□□□□□ -0.88
PTPRR-204ENST00000440835 DNMT1P26358 1616 aaKnown RBP9.55□□□□□ -0.88
PTPRR-204ENST00000440835 RNF17Q9BXT8 1623 aaKnown RBP9.55□□□□□ -0.88
PTPRR-204ENST00000440835 DEPDC5O75140 1603 aa9.55□□□□□ -0.88
PTPRR-204ENST00000440835 CAMSAP2Q08AD1 1489 aa9.55□□□□□ -0.88
PTPRR-204ENST00000440835 NCOA2Q15596 1464 aa9.55□□□□□ -0.88
PTPRR-204ENST00000440835 SPATA31D1Q6ZQQ2 1576 aa9.54□□□□□ -0.88
PTPRR-204ENST00000440835 MIA2Q96PC5 1412 aa9.53□□□□□ -0.88
PTPRR-204ENST00000440835 TNRQ92752 1358 aa9.53□□□□□ -0.88
PTPRR-204ENST00000440835 MED14O60244 1454 aa9.52□□□□□ -0.89
PTPRR-204ENST00000440835 GGT6Q6P531 493 aa9.51□□□□□ -0.89
PTPRR-204ENST00000440835 VPS8Q8N3P4 1428 aa9.5□□□□□ -0.89
PTPRR-204ENST00000440835 TSPY4P0CV99 314 aa9.5□□□□□ -0.89
PTPRR-204ENST00000440835 TSPY10P0CW01 314 aa9.5□□□□□ -0.89
PTPRR-204ENST00000440835 LRRC9Q6ZRR7 1453 aa9.5□□□□□ -0.89
PTPRR-204ENST00000440835 THEMISQ8N1K5 641 aaPredicted RBP9.5□□□□□ -0.89
PTPRR-204ENST00000440835 NEURL4Q96JN8 1562 aa9.5□□□□□ -0.89
PTPRR-204ENST00000440835 NCKAP5LQ9HCH0 1330 aa9.49□□□□□ -0.89
PTPRR-204ENST00000440835 DISP3Q9P2K9 1392 aa9.49□□□□□ -0.89
PTPRR-204ENST00000440835 SHANK2Q9UPX8 1470 aa9.48□□□□□ -0.89
PTPRR-204ENST00000440835 DUOX2Q9NRD8 1548 aa9.48□□□□□ -0.89
PTPRR-204ENST00000440835 SYNMO15061 1565 aa9.48□□□□□ -0.89
PTPRR-204ENST00000440835 ZNF644Q9H582 1327 aaPredicted RBP9.48□□□□□ -0.89
PTPRR-204ENST00000440835 KDM5AP29375 1690 aaKnown RBP9.48□□□□□ -0.89
PTPRR-204ENST00000440835 SOCS7O14512 581 aa9.48□□□□□ -0.89
PTPRR-204ENST00000440835 UGGT1Q9NYU2 1555 aa9.48□□□□□ -0.89
PTPRR-204ENST00000440835 WASHC2CQ9Y4E1 1318 aa9.48□□□□□ -0.89
PTPRR-204ENST00000440835 ABCC3O15438 1527 aa9.47□□□□□ -0.89
PTPRR-204ENST00000440835 MYOM3Q5VTT5 1437 aa9.47□□□□□ -0.89
PTPRR-204ENST00000440835 KIF3BO15066 747 aa9.47□□□□□ -0.89
PTPRR-204ENST00000440835 ANKLE2Q86XL3 938 aa9.47□□□□□ -0.89
PTPRR-204ENST00000440835 ARHGAP31Q2M1Z3 1444 aa9.47□□□□□ -0.89
PTPRR-204ENST00000440835 IQGAP1P46940 1657 aa9.46□□□□□ -0.89
PTPRR-204ENST00000440835 VWDEQ8N2E2 1590 aa9.46□□□□□ -0.9
PTPRR-204ENST00000440835 ZNF335Q9H4Z2 1342 aaPredicted RBP9.46□□□□□ -0.9
PTPRR-204ENST00000440835 CROCC2H7BZ55 1655 aa9.46□□□□□ -0.9
PTPRR-204ENST00000440835 ERBINQ96RT1 1412 aa9.45□□□□□ -0.9
PTPRR-204ENST00000440835 UBAP1LF5GYI3 381 aa9.45□□□□□ -0.9
PTPRR-204ENST00000440835 NPHP4O75161 1426 aaPredicted RBP9.45□□□□□ -0.9
PTPRR-204ENST00000440835 TOM1O60784 492 aa9.45□□□□□ -0.9
PTPRR-204ENST00000440835 ERVK-7P63135 1459 aa9.45□□□□□ -0.9
PTPRR-204ENST00000440835 PRDM15P57071 1507 aaPredicted RBP9.44□□□□□ -0.9
PTPRR-204ENST00000440835 MROH1Q8NDA8 1641 aa9.44□□□□□ -0.9
PTPRR-204ENST00000440835 UBR1Q8IWV7 1749 aa9.43□□□□□ -0.9
PTPRR-204ENST00000440835 SLIT1O75093 1534 aa9.43□□□□□ -0.9
PTPRR-204ENST00000440835 LMTK2Q8IWU2 1503 aa9.42□□□□□ -0.9
PTPRR-204ENST00000440835 ARHGAP23Q9P227 1491 aa9.42□□□□□ -0.9
PTPRR-204ENST00000440835 CEP152O94986 1710 aa9.41□□□□□ -0.9
PTPRR-204ENST00000440835 FBXO31Q5XUX0 539 aaPredicted RBP9.4□□□□□ -0.9
PTPRR-204ENST00000440835 KANK1Q14678 1352 aa9.4□□□□□ -0.9
PTPRR-204ENST00000440835 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.4□□□□□ -0.9
PTPRR-204ENST00000440835 PTPN23Q9H3S7 1636 aa9.4□□□□□ -0.9
PTPRR-204ENST00000440835 SCAF11Q99590 1463 aaKnown RBP9.39□□□□□ -0.91
PTPRR-204ENST00000440835 HRCP23327 699 aa9.39□□□□□ -0.91
PTPRR-204ENST00000440835 ILDR2Q71H61 639 aa9.38□□□□□ -0.91
PTPRR-204ENST00000440835 MED1Q15648 1581 aaPredicted RBP9.38□□□□□ -0.91
PTPRR-204ENST00000440835 KIF15Q9NS87 1388 aa9.37□□□□□ -0.91
PTPRR-204ENST00000440835 LRRC7Q96NW7 1537 aa9.37□□□□□ -0.91
PTPRR-204ENST00000440835 ABCC5O15440 1437 aa9.36□□□□□ -0.91
PTPRR-204ENST00000440835 DAPK1P53355 1430 aa9.36□□□□□ -0.91
PTPRR-204ENST00000440835 ADGRL2O95490 1459 aa9.36□□□□□ -0.91
PTPRR-204ENST00000440835 STRCP1A6NGW2 1772 aa9.36□□□□□ -0.91
PTPRR-204ENST00000440835 ANKRD30AQ9BXX3 1397 aa9.36□□□□□ -0.91
PTPRR-204ENST00000440835 APLP2Q06481 763 aa9.36□□□□□ -0.91
PTPRR-204ENST00000440835 RPRD2Q5VT52 1461 aaKnown RBP9.36□□□□□ -0.91
PTPRR-204ENST00000440835 EID1Q9Y6B2 187 aa9.36□□□□□ -0.91
PTPRR-204ENST00000440835 ALKQ9UM73 1620 aa9.36□□□□□ -0.91
PTPRR-204ENST00000440835 FGD6Q6ZV73 1430 aa9.35□□□□□ -0.91
PTPRR-204ENST00000440835 PIK3C2BO00750 1634 aa9.35□□□□□ -0.91
PTPRR-204ENST00000440835 EFCAB6Q5THR3 1501 aa9.34□□□□□ -0.91
PTPRR-204ENST00000440835 HSPA1LP34931 641 aa9.33□□□□□ -0.92
PTPRR-204ENST00000440835 TMEM2Q9UHN6 1383 aa9.33□□□□□ -0.92
PTPRR-204ENST00000440835 NKTRP30414 1462 aaKnown RBP9.33□□□□□ -0.92
PTPRR-204ENST00000440835 ADGRB3O60242 1522 aa9.33□□□□□ -0.92
PTPRR-204ENST00000440835 NWD1Q149M9 1564 aa9.33□□□□□ -0.92
PTPRR-204ENST00000440835 KANK4Q5T7N3 995 aaPredicted RBP9.32□□□□□ -0.92
PTPRR-204ENST00000440835 NOS1P29475 1434 aa9.32□□□□□ -0.92
PTPRR-204ENST00000440835 XIRP1Q702N8 1843 aaKnown RBP9.32□□□□□ -0.92
PTPRR-204ENST00000440835 SLC52A1Q9NWF4 448 aa9.32□□□□□ -0.92
PTPRR-204ENST00000440835 FAM135BQ49AJ0 1406 aa9.32□□□□□ -0.92
PTPRR-204ENST00000440835 CFAP65Q6ZU64 1925 aaKnown RBP9.31□□□□□ -0.92
PTPRR-204ENST00000440835 GCC2Q8IWJ2 1684 aa9.31□□□□□ -0.92
PTPRR-204ENST00000440835 TET3O43151 1660 aa9.31□□□□□ -0.92
PTPRR-204ENST00000440835 NCOA3Q9Y6Q9 1424 aa9.31□□□□□ -0.92
PTPRR-204ENST00000440835 HDGFP51858 240 aaKnown RBP9.31□□□□□ -0.92
PTPRR-204ENST00000440835 TXNDC2Q86VQ3 553 aa9.31□□□□□ -0.92
PTPRR-204ENST00000440835 PIP4K2BP78356 416 aa9.29□□□□□ -0.92
PTPRR-204ENST00000440835 DIP2AQ14689 1571 aa9.29□□□□□ -0.92
PTPRR-204ENST00000440835 SCAF1Q9H7N4 1312 aaKnown RBP9.29□□□□□ -0.92
PTPRR-204ENST00000440835 KCNA6P17658 529 aa9.29□□□□□ -0.92
PTPRR-204ENST00000440835 UNC13BO14795 1591 aa9.29□□□□□ -0.92
PTPRR-204ENST00000440835 LTKP29376 864 aa9.27□□□□□ -0.92
PTPRR-204ENST00000440835 RRP7BPQ9NSQ0 103 aa9.27□□□□□ -0.92
PTPRR-204ENST00000440835 STAG3Q9UJ98 1225 aa9.27□□□□□ -0.92
PTPRR-204ENST00000440835 ROCK1Q13464 1354 aa9.27□□□□□ -0.93
PTPRR-204ENST00000440835 CHD2O14647 1828 aaKnown RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms