RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 PKD2Q13563 968 aa27.73■■■□□ 2.03
SNX17-203ENST00000440760 ANKRD30BQ9BXX2 1392 aa27.73■■■□□ 2.03
SNX17-203ENST00000440760 DEPDC5O75140 1603 aa27.7■■■□□ 2.03
SNX17-203ENST00000440760 EIF2AK4Q9P2K8 1649 aaKnown RBP27.7■■■□□ 2.03
SNX17-203ENST00000440760 DHX29Q7Z478 1369 aaKnown RBP27.69■■■□□ 2.02
SNX17-203ENST00000440760 A2MP01023 1474 aa27.68■■■□□ 2.02
SNX17-203ENST00000440760 DIP2CQ9Y2E4 1556 aa27.67■■■□□ 2.02
SNX17-203ENST00000440760 TONSLQ96HA7 1378 aa27.67■■■□□ 2.02
SNX17-203ENST00000440760 DNAJC5Q9H3Z4 198 aa27.66■■■□□ 2.02
SNX17-203ENST00000440760 MROH1Q8NDA8 1641 aa27.64■■■□□ 2.02
SNX17-203ENST00000440760 YEATS2Q9ULM3 1422 aa27.63■■■□□ 2.01
SNX17-203ENST00000440760 ZMYM4Q5VZL5 1548 aa27.63■■■□□ 2.01
SNX17-203ENST00000440760 KIF3BO15066 747 aa27.62■■■□□ 2.01
SNX17-203ENST00000440760 RPRD2Q5VT52 1461 aaKnown RBP27.62■■■□□ 2.01
SNX17-203ENST00000440760 PRDM15P57071 1507 aaPredicted RBP27.6■■■□□ 2.01
SNX17-203ENST00000440760 TIMELESSQ9UNS1 1208 aa27.59■■■□□ 2.01
SNX17-203ENST00000440760 COL17A1Q9UMD9 1497 aaPredicted RBP27.58■■■□□ 2.01
SNX17-203ENST00000440760 RNF17Q9BXT8 1623 aaKnown RBP27.58■■■□□ 2
SNX17-203ENST00000440760 VWDEQ8N2E2 1590 aa27.57■■■□□ 2
SNX17-203ENST00000440760 E9PCH4 1651 aa27.54■■■□□ 2
SNX17-203ENST00000440760 BCORL1Q5H9F3 1711 aa27.54■■■□□ 2
SNX17-203ENST00000440760 TET3O43151 1660 aa27.52■■■□□ 2
SNX17-203ENST00000440760 CEP152O94986 1710 aa27.52■■■□□ 2
SNX17-203ENST00000440760 PPP1R15AO75807 674 aaPredicted RBP27.51■■□□□ 1.99
SNX17-203ENST00000440760 KANK1Q14678 1352 aa27.5■■□□□ 1.99
SNX17-203ENST00000440760 PLA2R1Q13018 1463 aa27.49■■□□□ 1.99
SNX17-203ENST00000440760 TRHP20396 242 aaPredicted RBP27.48■■□□□ 1.99
SNX17-203ENST00000440760 L3MBTL2Q969R5 705 aa27.46■■□□□ 1.99
SNX17-203ENST00000440760 GGT6Q6P531 493 aa27.44■■□□□ 1.98
SNX17-203ENST00000440760 ARHGEF40Q8TER5 1519 aa27.43■■□□□ 1.98
SNX17-203ENST00000440760 SPHKAPQ2M3C7 1700 aa27.43■■□□□ 1.98
SNX17-203ENST00000440760 EFCAB6Q5THR3 1501 aa27.42■■□□□ 1.98
SNX17-203ENST00000440760 ZNF316A6NFI3 1004 aaPredicted RBP27.42■■□□□ 1.98
SNX17-203ENST00000440760 SIGLEC1Q9BZZ2 1709 aa27.42■■□□□ 1.98
SNX17-203ENST00000440760 CCDC144AA2RUR9 1427 aa27.42■■□□□ 1.98
SNX17-203ENST00000440760 ATP10AO60312 1499 aa27.42■■□□□ 1.98
SNX17-203ENST00000440760 LMTK2Q8IWU2 1503 aa27.4■■□□□ 1.98
SNX17-203ENST00000440760 ABCC3O15438 1527 aa27.38■■□□□ 1.97
SNX17-203ENST00000440760 REREQ9P2R6 1566 aa27.37■■□□□ 1.97
SNX17-203ENST00000440760 TRPM2O94759 1503 aa27.36■■□□□ 1.97
SNX17-203ENST00000440760 CAMSAP1Q5T5Y3 1602 aa27.34■■□□□ 1.97
SNX17-203ENST00000440760 CLTCL1P53675 1640 aa27.33■■□□□ 1.97
SNX17-203ENST00000440760 PTPRTO14522 1441 aa27.32■■□□□ 1.96
SNX17-203ENST00000440760 ZC3H13Q5T200 1668 aaKnown RBP27.3■■□□□ 1.96
SNX17-203ENST00000440760 WASHC2CQ9Y4E1 1318 aa27.3■■□□□ 1.96
SNX17-203ENST00000440760 CFAP65Q6ZU64 1925 aaKnown RBP27.3■■□□□ 1.96
SNX17-203ENST00000440760 AGLP35573 1532 aa27.29■■□□□ 1.96
SNX17-203ENST00000440760 NPATQ14207 1427 aa27.29■■□□□ 1.96
SNX17-203ENST00000440760 UGGT1Q9NYU2 1555 aa27.29■■□□□ 1.96
SNX17-203ENST00000440760 NBPF8Q3BBV2 869 aa27.28■■□□□ 1.96
SNX17-203ENST00000440760 RGL3Q3MIN7 710 aa27.23■■□□□ 1.95
SNX17-203ENST00000440760 ZNF326Q5BKZ1 582 aaKnown RBP27.23■■□□□ 1.95
SNX17-203ENST00000440760 SPATA31E1Q6ZUB1 1445 aa27.2■■□□□ 1.94
SNX17-203ENST00000440760 DCAF11Q8TEB1 546 aa27.2■■□□□ 1.94
SNX17-203ENST00000440760 HIRIP3Q9BW71 556 aaPredicted RBP27.19■■□□□ 1.94
SNX17-203ENST00000440760 KDM2AQ9Y2K7 1162 aa27.19■■□□□ 1.94
SNX17-203ENST00000440760 MLECQ14165 292 aa27.18■■□□□ 1.94
SNX17-203ENST00000440760 CLTCQ00610 1675 aaKnown RBP27.18■■□□□ 1.94
SNX17-203ENST00000440760 MROH2AA6NES4 1674 aa27.16■■□□□ 1.94
SNX17-203ENST00000440760 UHRF1BP1Q6BDS2 1440 aa27.16■■□□□ 1.94
SNX17-203ENST00000440760 KIF1BO60333 1816 aa27.15■■□□□ 1.94
SNX17-203ENST00000440760 SYNMO15061 1565 aa27.14■■□□□ 1.94
SNX17-203ENST00000440760 ARHGAP31Q2M1Z3 1444 aa27.14■■□□□ 1.93
SNX17-203ENST00000440760 DIEXFQ68CQ4 756 aaKnown RBP27.13■■□□□ 1.93
SNX17-203ENST00000440760 CNTLNQ9NXG0 1405 aa27.12■■□□□ 1.93
SNX17-203ENST00000440760 PREX1Q8TCU6 1659 aa27.12■■□□□ 1.93
SNX17-203ENST00000440760 NOS1P29475 1434 aa27.11■■□□□ 1.93
SNX17-203ENST00000440760 PRAG1Q86YV5 1406 aa27.1■■□□□ 1.93
SNX17-203ENST00000440760 RALGAPBQ86X10 1494 aa27.09■■□□□ 1.93
SNX17-203ENST00000440760 ARID4BQ4LE39 1312 aaPredicted RBP27.09■■□□□ 1.93
SNX17-203ENST00000440760 PIK3C2BO00750 1634 aa27.07■■□□□ 1.92
SNX17-203ENST00000440760 TRPM1Q7Z4N2 1603 aa27.07■■□□□ 1.92
SNX17-203ENST00000440760 ADGRB3O60242 1522 aa27.07■■□□□ 1.92
SNX17-203ENST00000440760 NEURL4Q96JN8 1562 aa27.06■■□□□ 1.92
SNX17-203ENST00000440760 HSPA5P11021 654 aaKnown RBP27.05■■□□□ 1.92
SNX17-203ENST00000440760 MADDQ8WXG6 1647 aa27.03■■□□□ 1.92
SNX17-203ENST00000440760 IFT172Q9UG01 1749 aa27.03■■□□□ 1.92
SNX17-203ENST00000440760 FBXO31Q5XUX0 539 aaPredicted RBP27.02■■□□□ 1.92
SNX17-203ENST00000440760 PPP6R1Q9UPN7 881 aa27.02■■□□□ 1.92
SNX17-203ENST00000440760 ERVK-7P63135 1459 aa27.01■■□□□ 1.92
SNX17-203ENST00000440760 EIF4G2P78344 907 aaKnown RBP eCLIP27.01■■□□□ 1.91
SNX17-203ENST00000440760 CHGAP10645 457 aaKnown RBP27■■□□□ 1.91
SNX17-203ENST00000440760 ROCK2O75116 1388 aaKnown RBP26.96■■□□□ 1.91
SNX17-203ENST00000440760 MYO5BQ9ULV0 1848 aa26.96■■□□□ 1.91
SNX17-203ENST00000440760 USP47Q96K76 1375 aa26.96■■□□□ 1.91
SNX17-203ENST00000440760 PPLO60437 1756 aa26.94■■□□□ 1.9
SNX17-203ENST00000440760 SPATA31D1Q6ZQQ2 1576 aa26.94■■□□□ 1.9
SNX17-203ENST00000440760 CARD11Q9BXL7 1154 aa26.94■■□□□ 1.9
SNX17-203ENST00000440760 ESF1Q9H501 851 aaKnown RBP26.94■■□□□ 1.9
SNX17-203ENST00000440760 IDI1Q13907 227 aa26.93■■□□□ 1.9
SNX17-203ENST00000440760 NBPF1Q3BBV0 1214 aa26.92■■□□□ 1.9
SNX17-203ENST00000440760 MYOM2P54296 1465 aa26.92■■□□□ 1.9
SNX17-203ENST00000440760 ZMYM3Q14202 1370 aa26.91■■□□□ 1.9
SNX17-203ENST00000440760 FER1L4A9Z1Z3 1794 aa26.9■■□□□ 1.9
SNX17-203ENST00000440760 TMEM131LA2VDJ0 1609 aa26.89■■□□□ 1.9
SNX17-203ENST00000440760 LAMC1P11047 1609 aa26.88■■□□□ 1.89
SNX17-203ENST00000440760 SLC52A1Q9NWF4 448 aa26.88■■□□□ 1.89
SNX17-203ENST00000440760 ADGRF5Q8IZF2 1346 aa26.87■■□□□ 1.89
SNX17-203ENST00000440760 GPRASP1Q5JY77 1395 aa26.87■■□□□ 1.89
SNX17-203ENST00000440760 NEXMIFQ5QGS0 1516 aa26.86■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms