RNA–Protein interactions for RNA: ENST00000440612.5

CGREF1-207, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 3

Gene CGREF1, Length 1,695 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-207ENST00000440612 EIF2AK4Q9P2K8 1649 aaKnown RBP40.9■■■■■ 4.14
CGREF1-207ENST00000440612 YEATS2Q9ULM3 1422 aa40.89■■■■■ 4.14
CGREF1-207ENST00000440612 SIN3AQ96ST3 1273 aa40.88■■■■■ 4.14
CGREF1-207ENST00000440612 DEPDC5O75140 1603 aa40.88■■■■■ 4.13
CGREF1-207ENST00000440612 FAM135AQ9P2D6 1515 aa40.87■■■■■ 4.13
CGREF1-207ENST00000440612 FOXD1Q16676 465 aa40.86■■■■■ 4.13
CGREF1-207ENST00000440612 IQGAP3Q86VI3 1631 aa40.85■■■■■ 4.13
CGREF1-207ENST00000440612 TRHP20396 242 aaPredicted RBP40.84■■■■■ 4.13
CGREF1-207ENST00000440612 ANKRD30BQ9BXX2 1392 aa40.82■■■■■ 4.12
CGREF1-207ENST00000440612 PKD2Q13563 968 aa40.8■■■■■ 4.12
CGREF1-207ENST00000440612 MROH1Q8NDA8 1641 aa40.79■■■■■ 4.12
CGREF1-207ENST00000440612 GRWD1Q9BQ67 446 aaKnown RBP eCLIP40.78■■■■■ 4.12
CGREF1-207ENST00000440612 KIF3BO15066 747 aa40.78■■■■■ 4.12
CGREF1-207ENST00000440612 BCORL1Q5H9F3 1711 aa40.77■■■■■ 4.12
CGREF1-207ENST00000440612 VWDEQ8N2E2 1590 aa40.76■■■■■ 4.11
CGREF1-207ENST00000440612 PRDM15P57071 1507 aaPredicted RBP40.74■■■■■ 4.11
CGREF1-207ENST00000440612 RNF17Q9BXT8 1623 aaKnown RBP40.73■■■■■ 4.11
CGREF1-207ENST00000440612 NEUROD1Q13562 356 aa40.72■■■■■ 4.11
CGREF1-207ENST00000440612 ATP10AO60312 1499 aa40.68■■■■■ 4.1
CGREF1-207ENST00000440612 REREQ9P2R6 1566 aa40.65■■■■■ 4.1
CGREF1-207ENST00000440612 TIMELESSQ9UNS1 1208 aa40.62■■■■■ 4.09
CGREF1-207ENST00000440612 ARHGEF40Q8TER5 1519 aa40.62■■■■■ 4.09
CGREF1-207ENST00000440612 KANK1Q14678 1352 aa40.58■■■■■ 4.09
CGREF1-207ENST00000440612 RPRD2Q5VT52 1461 aaKnown RBP40.58■■■■■ 4.09
CGREF1-207ENST00000440612 LMTK2Q8IWU2 1503 aa40.55■■■■■ 4.08
CGREF1-207ENST00000440612 PLA2R1Q13018 1463 aa40.55■■■■■ 4.08
CGREF1-207ENST00000440612 TET3O43151 1660 aa40.55■■■■■ 4.08
CGREF1-207ENST00000440612 AGLP35573 1532 aa40.53■■■■■ 4.08
CGREF1-207ENST00000440612 SIGLEC1Q9BZZ2 1709 aa40.53■■■■■ 4.08
CGREF1-207ENST00000440612 E9PCH4 1651 aa40.52■■■■■ 4.08
CGREF1-207ENST00000440612 GGT6Q6P531 493 aa40.5■■■■■ 4.07
CGREF1-207ENST00000440612 TONSLQ96HA7 1378 aa40.47■■■■■ 4.07
CGREF1-207ENST00000440612 ABCC3O15438 1527 aa40.44■■■■■ 4.06
CGREF1-207ENST00000440612 EFCAB6Q5THR3 1501 aa40.44■■■■■ 4.06
CGREF1-207ENST00000440612 CEP152O94986 1710 aa40.44■■■■■ 4.06
CGREF1-207ENST00000440612 PTPRTO14522 1441 aa40.4■■■■■ 4.06
CGREF1-207ENST00000440612 PPP1R15AO75807 674 aaPredicted RBP40.39■■■■■ 4.06
CGREF1-207ENST00000440612 WASHC2CQ9Y4E1 1318 aa40.34■■■■■ 4.05
CGREF1-207ENST00000440612 L3MBTL2Q969R5 705 aa40.34■■■■■ 4.05
CGREF1-207ENST00000440612 TRPM2O94759 1503 aa40.32■■■■■ 4.04
CGREF1-207ENST00000440612 CCDC144AA2RUR9 1427 aa40.31■■■■■ 4.04
CGREF1-207ENST00000440612 ZC3H13Q5T200 1668 aaKnown RBP40.31■■■■■ 4.04
CGREF1-207ENST00000440612 NPATQ14207 1427 aa40.31■■■■■ 4.04
CGREF1-207ENST00000440612 SPHKAPQ2M3C7 1700 aa40.3■■■■■ 4.04
CGREF1-207ENST00000440612 CAMSAP1Q5T5Y3 1602 aa40.29■■■■■ 4.04
CGREF1-207ENST00000440612 ARHGAP31Q2M1Z3 1444 aa40.24■■■■■ 4.03
CGREF1-207ENST00000440612 PPP6R1Q9UPN7 881 aa40.23■■■■■ 4.03
CGREF1-207ENST00000440612 CLTCL1P53675 1640 aa40.18■■■■■ 4.02
CGREF1-207ENST00000440612 NOS1P29475 1434 aa40.14■■■■■ 4.02
CGREF1-207ENST00000440612 SPATA31E1Q6ZUB1 1445 aa40.13■■■■■ 4.01
CGREF1-207ENST00000440612 MLECQ14165 292 aa40.12■■■■■ 4.01
CGREF1-207ENST00000440612 UGGT1Q9NYU2 1555 aa40.11■■■■■ 4.01
CGREF1-207ENST00000440612 CNTLNQ9NXG0 1405 aa40.1■■■■■ 4.01
CGREF1-207ENST00000440612 CLTCQ00610 1675 aaKnown RBP40.08■■■■■ 4.01
CGREF1-207ENST00000440612 ARID4BQ4LE39 1312 aaPredicted RBP40.06■■■■■ 4
CGREF1-207ENST00000440612 NBPF8Q3BBV2 869 aa40.05■■■■■ 4
CGREF1-207ENST00000440612 SYNMO15061 1565 aa40.03■■■■■ 4
CGREF1-207ENST00000440612 NEURL4Q96JN8 1562 aa40.02■■■■■ 4
CGREF1-207ENST00000440612 CFAP65Q6ZU64 1925 aaKnown RBP40.01■■■■■ 4
CGREF1-207ENST00000440612 UHRF1BP1Q6BDS2 1440 aa40■■■■□ 3.99
CGREF1-207ENST00000440612 RGL3Q3MIN7 710 aa39.99■■■■□ 3.99
CGREF1-207ENST00000440612 PREX1Q8TCU6 1659 aa39.99■■■■□ 3.99
CGREF1-207ENST00000440612 PIK3C2BO00750 1634 aa39.97■■■■□ 3.99
CGREF1-207ENST00000440612 DCAF11Q8TEB1 546 aa39.96■■■■□ 3.99
CGREF1-207ENST00000440612 ERVK-7P63135 1459 aa39.95■■■■□ 3.99
CGREF1-207ENST00000440612 FBXO31Q5XUX0 539 aaPredicted RBP39.94■■■■□ 3.98
CGREF1-207ENST00000440612 ZNF316A6NFI3 1004 aaPredicted RBP39.93■■■■□ 3.98
CGREF1-207ENST00000440612 ZMYM3Q14202 1370 aa39.91■■■■□ 3.98
CGREF1-207ENST00000440612 ADGRB3O60242 1522 aa39.9■■■■□ 3.98
CGREF1-207ENST00000440612 SPATA31D1Q6ZQQ2 1576 aa39.88■■■■□ 3.97
CGREF1-207ENST00000440612 KIF1BO60333 1816 aa39.87■■■■□ 3.97
CGREF1-207ENST00000440612 KDM2AQ9Y2K7 1162 aa39.87■■■■□ 3.97
CGREF1-207ENST00000440612 MROH2AA6NES4 1674 aa39.87■■■■□ 3.97
CGREF1-207ENST00000440612 PRAG1Q86YV5 1406 aa39.84■■■■□ 3.97
CGREF1-207ENST00000440612 ESF1Q9H501 851 aaKnown RBP39.83■■■■□ 3.97
CGREF1-207ENST00000440612 IDI1Q13907 227 aa39.83■■■■□ 3.97
CGREF1-207ENST00000440612 SLC52A1Q9NWF4 448 aa39.83■■■■□ 3.97
CGREF1-207ENST00000440612 ZNF326Q5BKZ1 582 aaKnown RBP39.79■■■■□ 3.96
CGREF1-207ENST00000440612 RALGAPBQ86X10 1494 aa39.78■■■■□ 3.96
CGREF1-207ENST00000440612 IFT172Q9UG01 1749 aa39.73■■■■□ 3.95
CGREF1-207ENST00000440612 FER1L4A9Z1Z3 1794 aa39.73■■■■□ 3.95
CGREF1-207ENST00000440612 STAC3Q96MF2 364 aa39.73■■■■□ 3.95
CGREF1-207ENST00000440612 MADDQ8WXG6 1647 aa39.7■■■■□ 3.95
CGREF1-207ENST00000440612 TMEM131LA2VDJ0 1609 aa39.7■■■■□ 3.95
CGREF1-207ENST00000440612 TRPM1Q7Z4N2 1603 aa39.7■■■■□ 3.95
CGREF1-207ENST00000440612 MYOM2P54296 1465 aa39.69■■■■□ 3.94
CGREF1-207ENST00000440612 CHGAP10645 457 aaKnown RBP39.69■■■■□ 3.94
CGREF1-207ENST00000440612 C3P01024 1663 aa39.65■■■■□ 3.94
CGREF1-207ENST00000440612 NRXN1Q9ULB1 1477 aa39.64■■■■□ 3.94
CGREF1-207ENST00000440612 RPGRIP1LQ68CZ1 1315 aa39.63■■■■□ 3.93
CGREF1-207ENST00000440612 ADAMTSL3P82987 1691 aa39.63■■■■□ 3.93
CGREF1-207ENST00000440612 PPLO60437 1756 aa39.62■■■■□ 3.93
CGREF1-207ENST00000440612 CEBPAP49715 358 aaPredicted RBP39.61■■■■□ 3.93
CGREF1-207ENST00000440612 HIRIP3Q9BW71 556 aaPredicted RBP39.61■■■■□ 3.93
CGREF1-207ENST00000440612 TNRQ92752 1358 aa39.61■■■■□ 3.93
CGREF1-207ENST00000440612 NEXMIFQ5QGS0 1516 aa39.6■■■■□ 3.93
CGREF1-207ENST00000440612 HSPA5P11021 654 aaKnown RBP39.6■■■■□ 3.93
CGREF1-207ENST00000440612 GPRASP1Q5JY77 1395 aa39.6■■■■□ 3.93
CGREF1-207ENST00000440612 ADGRF5Q8IZF2 1346 aa39.6■■■■□ 3.93
CGREF1-207ENST00000440612 MYO5BQ9ULV0 1848 aa39.58■■■■□ 3.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms