RNA–Protein interactions for RNA: ENST00000440437.1

COL16A1-204, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-204ENST00000440437 TSPY10P0CW01 314 aa26.51■■□□□ 1.83
COL16A1-204ENST00000440437 EIF2AK4Q9P2K8 1649 aaKnown RBP26.5■■□□□ 1.83
COL16A1-204ENST00000440437 PTPRTO14522 1441 aa26.5■■□□□ 1.83
COL16A1-204ENST00000440437 DMRT2Q9Y5R5 561 aa26.5■■□□□ 1.83
COL16A1-204ENST00000440437 KIF3BO15066 747 aa26.49■■□□□ 1.83
COL16A1-204ENST00000440437 PTPN23Q9H3S7 1636 aa26.49■■□□□ 1.83
COL16A1-204ENST00000440437 PZPP20742 1482 aa26.45■■□□□ 1.82
COL16A1-204ENST00000440437 ZC3H13Q5T200 1668 aaKnown RBP26.44■■□□□ 1.82
COL16A1-204ENST00000440437 CERKQ8TCT0 537 aa26.44■■□□□ 1.82
COL16A1-204ENST00000440437 PLA2R1Q13018 1463 aa26.43■■□□□ 1.82
COL16A1-204ENST00000440437 APLP2Q06481 763 aa26.43■■□□□ 1.82
COL16A1-204ENST00000440437 MROH1Q8NDA8 1641 aa26.43■■□□□ 1.82
COL16A1-204ENST00000440437 SHANK2Q9UPX8 1470 aa26.42■■□□□ 1.82
COL16A1-204ENST00000440437 DNMT1P26358 1616 aaKnown RBP26.42■■□□□ 1.82
COL16A1-204ENST00000440437 A2ML1A8K2U0 1454 aa26.41■■□□□ 1.82
COL16A1-204ENST00000440437 TCOF1Q13428 1488 aaKnown RBP26.41■■□□□ 1.82
COL16A1-204ENST00000440437 FGD6Q6ZV73 1430 aa26.39■■□□□ 1.82
COL16A1-204ENST00000440437 DUOX2Q9NRD8 1548 aa26.39■■□□□ 1.82
COL16A1-204ENST00000440437 ABCC3O15438 1527 aa26.38■■□□□ 1.81
COL16A1-204ENST00000440437 ABCC5O15440 1437 aa26.38■■□□□ 1.81
COL16A1-204ENST00000440437 LTBP4Q8N2S1 1624 aa26.37■■□□□ 1.81
COL16A1-204ENST00000440437 WASHC2CQ9Y4E1 1318 aa26.37■■□□□ 1.81
COL16A1-204ENST00000440437 CEP152O94986 1710 aa26.36■■□□□ 1.81
COL16A1-204ENST00000440437 TNRQ92752 1358 aa26.35■■□□□ 1.81
COL16A1-204ENST00000440437 DAPK1P53355 1430 aa26.35■■□□□ 1.81
COL16A1-204ENST00000440437 FBXO31Q5XUX0 539 aaPredicted RBP26.34■■□□□ 1.81
COL16A1-204ENST00000440437 POLR1AO95602 1720 aaPredicted RBP26.34■■□□□ 1.81
COL16A1-204ENST00000440437 PRDM15P57071 1507 aaPredicted RBP26.31■■□□□ 1.8
COL16A1-204ENST00000440437 NCKAP5LQ9HCH0 1330 aa26.31■■□□□ 1.8
COL16A1-204ENST00000440437 KIF15Q9NS87 1388 aa26.31■■□□□ 1.8
COL16A1-204ENST00000440437 SPATA31D1Q6ZQQ2 1576 aa26.3■■□□□ 1.8
COL16A1-204ENST00000440437 ERBINQ96RT1 1412 aa26.3■■□□□ 1.8
COL16A1-204ENST00000440437 DEPDC5O75140 1603 aa26.29■■□□□ 1.8
COL16A1-204ENST00000440437 PKD2Q13563 968 aa26.29■■□□□ 1.8
COL16A1-204ENST00000440437 NLRP1Q9C000 1473 aa26.28■■□□□ 1.8
COL16A1-204ENST00000440437 NEURL4Q96JN8 1562 aa26.26■■□□□ 1.79
COL16A1-204ENST00000440437 ERVK-7P63135 1459 aa26.24■■□□□ 1.79
COL16A1-204ENST00000440437 IQSEC2Q5JU85 1478 aa26.24■■□□□ 1.79
COL16A1-204ENST00000440437 UGGT1Q9NYU2 1555 aa26.23■■□□□ 1.79
COL16A1-204ENST00000440437 CFAP65Q6ZU64 1925 aaKnown RBP26.22■■□□□ 1.79
COL16A1-204ENST00000440437 RRP7BPQ9NSQ0 103 aa26.21■■□□□ 1.79
COL16A1-204ENST00000440437 ADGRL2O95490 1459 aa26.2■■□□□ 1.78
COL16A1-204ENST00000440437 ANKRD30AQ9BXX3 1397 aa26.18■■□□□ 1.78
COL16A1-204ENST00000440437 ZNF335Q9H4Z2 1342 aaPredicted RBP26.17■■□□□ 1.78
COL16A1-204ENST00000440437 ARHGAP31Q2M1Z3 1444 aa26.17■■□□□ 1.78
COL16A1-204ENST00000440437 VWDEQ8N2E2 1590 aa26.16■■□□□ 1.78
COL16A1-204ENST00000440437 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.16■■□□□ 1.78
COL16A1-204ENST00000440437 UBR1Q8IWV7 1749 aa26.16■■□□□ 1.78
COL16A1-204ENST00000440437 LMTK2Q8IWU2 1503 aa26.14■■□□□ 1.77
COL16A1-204ENST00000440437 CHIC2Q9UKJ5 165 aa26.13■■□□□ 1.77
COL16A1-204ENST00000440437 MED14O60244 1454 aa26.12■■□□□ 1.77
COL16A1-204ENST00000440437 THEMISQ8N1K5 641 aaPredicted RBP26.12■■□□□ 1.77
COL16A1-204ENST00000440437 IQGAP1P46940 1657 aa26.1■■□□□ 1.77
COL16A1-204ENST00000440437 KANK1Q14678 1352 aa26.07■■□□□ 1.76
COL16A1-204ENST00000440437 FAM50AQ14320 339 aaKnown RBP26.07■■□□□ 1.76
COL16A1-204ENST00000440437 ANKLE2Q86XL3 938 aa26.07■■□□□ 1.76
COL16A1-204ENST00000440437 NPHP4O75161 1426 aaPredicted RBP26.05■■□□□ 1.76
COL16A1-204ENST00000440437 EFCAB6Q5THR3 1501 aa26.05■■□□□ 1.76
COL16A1-204ENST00000440437 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.05■■□□□ 1.76
COL16A1-204ENST00000440437 PIK3C2BO00750 1634 aa26.05■■□□□ 1.76
COL16A1-204ENST00000440437 CPS1P31327 1500 aa26.04■■□□□ 1.76
COL16A1-204ENST00000440437 KDM5AP29375 1690 aaKnown RBP26.03■■□□□ 1.76
COL16A1-204ENST00000440437 ARHGAP23Q9P227 1491 aa26.02■■□□□ 1.76
COL16A1-204ENST00000440437 SLIT1O75093 1534 aa26.02■■□□□ 1.76
COL16A1-204ENST00000440437 SYNMO15061 1565 aa26.01■■□□□ 1.75
COL16A1-204ENST00000440437 ANKRD50Q9ULJ7 1429 aa26.01■■□□□ 1.75
COL16A1-204ENST00000440437 UNC13BO14795 1591 aa25.99■■□□□ 1.75
COL16A1-204ENST00000440437 STRCP1A6NGW2 1772 aa25.98■■□□□ 1.75
COL16A1-204ENST00000440437 TET3O43151 1660 aa25.97■■□□□ 1.75
COL16A1-204ENST00000440437 SCAF11Q99590 1463 aaKnown RBP25.97■■□□□ 1.75
COL16A1-204ENST00000440437 NOS1P29475 1434 aa25.97■■□□□ 1.75
COL16A1-204ENST00000440437 GCC2Q8IWJ2 1684 aa25.96■■□□□ 1.75
COL16A1-204ENST00000440437 ROCK1Q13464 1354 aa25.93■■□□□ 1.74
COL16A1-204ENST00000440437 RPRD2Q5VT52 1461 aaKnown RBP25.92■■□□□ 1.74
COL16A1-204ENST00000440437 ADGRB3O60242 1522 aa25.9■■□□□ 1.74
COL16A1-204ENST00000440437 UBAP1LF5GYI3 381 aa25.89■■□□□ 1.74
COL16A1-204ENST00000440437 TMEM2Q9UHN6 1383 aa25.88■■□□□ 1.73
COL16A1-204ENST00000440437 LTKP29376 864 aa25.88■■□□□ 1.73
COL16A1-204ENST00000440437 IQGAP3Q86VI3 1631 aa25.88■■□□□ 1.73
COL16A1-204ENST00000440437 IDI1Q13907 227 aa25.86■■□□□ 1.73
COL16A1-204ENST00000440437 E9PCH4 1651 aa25.86■■□□□ 1.73
COL16A1-204ENST00000440437 MYO5BQ9ULV0 1848 aa25.86■■□□□ 1.73
COL16A1-204ENST00000440437 TXNDC2Q86VQ3 553 aa25.84■■□□□ 1.73
COL16A1-204ENST00000440437 PPARGC1BQ86YN6 1023 aaKnown RBP25.84■■□□□ 1.73
COL16A1-204ENST00000440437 ALKQ9UM73 1620 aa25.84■■□□□ 1.73
COL16A1-204ENST00000440437 LRRC7Q96NW7 1537 aa25.83■■□□□ 1.73
COL16A1-204ENST00000440437 XIRP1Q702N8 1843 aaKnown RBP25.8■■□□□ 1.72
COL16A1-204ENST00000440437 STAG3Q9UJ98 1225 aa25.8■■□□□ 1.72
COL16A1-204ENST00000440437 EID1Q9Y6B2 187 aa25.8■■□□□ 1.72
COL16A1-204ENST00000440437 SLC52A1Q9NWF4 448 aa25.79■■□□□ 1.72
COL16A1-204ENST00000440437 TMEM131LA2VDJ0 1609 aa25.78■■□□□ 1.72
COL16A1-204ENST00000440437 RRBP1Q9P2E9 1410 aaKnown RBP25.78■■□□□ 1.72
COL16A1-204ENST00000440437 TOM1O60784 492 aa25.75■■□□□ 1.71
COL16A1-204ENST00000440437 ITGAEP38570 1179 aa25.75■■□□□ 1.71
COL16A1-204ENST00000440437 ZFYVE9O95405 1425 aa25.73■■□□□ 1.71
COL16A1-204ENST00000440437 DISP3Q9P2K9 1392 aa25.71■■□□□ 1.71
COL16A1-204ENST00000440437 NUP155O75694 1391 aa25.69■■□□□ 1.7
COL16A1-204ENST00000440437 NWD1Q149M9 1564 aa25.69■■□□□ 1.7
COL16A1-204ENST00000440437 PIP4K2BP78356 416 aa25.69■■□□□ 1.7
COL16A1-204ENST00000440437 SPHKAPQ2M3C7 1700 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms