RNA–Protein interactions for RNA: ENST00000440431.6

SCN3A-204, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 4,146 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-204ENST00000440431 RNF17Q9BXT8 1623 aaKnown RBP6.26□□□□□ -1.41
SCN3A-204ENST00000440431 EIF2AK4Q9P2K8 1649 aaKnown RBP6.26□□□□□ -1.41
SCN3A-204ENST00000440431 DUOX2Q9NRD8 1548 aa6.26□□□□□ -1.41
SCN3A-204ENST00000440431 SLC24A1O60721 1099 aa6.26□□□□□ -1.41
SCN3A-204ENST00000440431 MPHOSPH9Q99550 1183 aa6.26□□□□□ -1.41
SCN3A-204ENST00000440431 ATP7AQ04656 1500 aa6.25□□□□□ -1.41
SCN3A-204ENST00000440431 FOXD1Q16676 465 aa6.25□□□□□ -1.41
SCN3A-204ENST00000440431 KIF15Q9NS87 1388 aa6.25□□□□□ -1.41
SCN3A-204ENST00000440431 PRDM15P57071 1507 aaPredicted RBP6.25□□□□□ -1.41
SCN3A-204ENST00000440431 ATP10AO60312 1499 aa6.24□□□□□ -1.41
SCN3A-204ENST00000440431 ERBINQ96RT1 1412 aa6.24□□□□□ -1.41
SCN3A-204ENST00000440431 CFAP74Q9C0B2 1584 aa6.24□□□□□ -1.41
SCN3A-204ENST00000440431 HDGFP51858 240 aaKnown RBP6.24□□□□□ -1.41
SCN3A-204ENST00000440431 ANKRD30AQ9BXX3 1397 aa6.24□□□□□ -1.41
SCN3A-204ENST00000440431 DIP2CQ9Y2E4 1556 aa6.23□□□□□ -1.41
SCN3A-204ENST00000440431 PPP1R15AO75807 674 aaPredicted RBP6.23□□□□□ -1.41
SCN3A-204ENST00000440431 POGZQ7Z3K3 1410 aa6.23□□□□□ -1.41
SCN3A-204ENST00000440431 AFAP1Q8N556 730 aa6.23□□□□□ -1.41
SCN3A-204ENST00000440431 COL17A1Q9UMD9 1497 aaPredicted RBP6.23□□□□□ -1.41
SCN3A-204ENST00000440431 ADGRL1O94910 1474 aa6.23□□□□□ -1.41
SCN3A-204ENST00000440431 MLH3Q9UHC1 1453 aa6.23□□□□□ -1.41
SCN3A-204ENST00000440431 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.23□□□□□ -1.41
SCN3A-204ENST00000440431 RSPH4AQ5TD94 716 aa6.22□□□□□ -1.41
SCN3A-204ENST00000440431 HECW2Q9P2P5 1572 aa6.22□□□□□ -1.41
SCN3A-204ENST00000440431 ZMYM4Q5VZL5 1548 aa6.22□□□□□ -1.41
SCN3A-204ENST00000440431 SPATA31E1Q6ZUB1 1445 aa6.22□□□□□ -1.41
SCN3A-204ENST00000440431 IFT172Q9UG01 1749 aa6.22□□□□□ -1.41
SCN3A-204ENST00000440431 CD109Q6YHK3 1445 aa6.22□□□□□ -1.41
SCN3A-204ENST00000440431 NEO1Q92859 1461 aa6.21□□□□□ -1.41
SCN3A-204ENST00000440431 CEP152O94986 1710 aa6.21□□□□□ -1.41
SCN3A-204ENST00000440431 TET3O43151 1660 aa6.21□□□□□ -1.41
SCN3A-204ENST00000440431 DIEXFQ68CQ4 756 aaKnown RBP6.21□□□□□ -1.41
SCN3A-204ENST00000440431 POLR1AO95602 1720 aaPredicted RBP6.21□□□□□ -1.42
SCN3A-204ENST00000440431 SPHKAPQ2M3C7 1700 aa6.21□□□□□ -1.42
SCN3A-204ENST00000440431 SCAPERQ9BY12 1400 aa6.21□□□□□ -1.42
SCN3A-204ENST00000440431 ZNF316A6NFI3 1004 aaPredicted RBP6.21□□□□□ -1.42
SCN3A-204ENST00000440431 YTHDC1Q96MU7 727 aaKnown RBP6.21□□□□□ -1.42
SCN3A-204ENST00000440431 DAXXQ9UER7 740 aaPredicted RBP6.21□□□□□ -1.42
SCN3A-204ENST00000440431 KANK1Q14678 1352 aa6.21□□□□□ -1.42
SCN3A-204ENST00000440431 LMTK2Q8IWU2 1503 aa6.21□□□□□ -1.42
SCN3A-204ENST00000440431 EFCAB2Q5VUJ9 269 aa6.21□□□□□ -1.42
SCN3A-204ENST00000440431 ARID4BQ4LE39 1312 aaPredicted RBP6.2□□□□□ -1.42
SCN3A-204ENST00000440431 CLTCL1P53675 1640 aa6.2□□□□□ -1.42
SCN3A-204ENST00000440431 CDCA8Q53HL2 280 aa6.2□□□□□ -1.42
SCN3A-204ENST00000440431 ZBTB47Q9UFB7 747 aaPredicted RBP6.2□□□□□ -1.42
SCN3A-204ENST00000440431 PTPRTO14522 1441 aa6.2□□□□□ -1.42
SCN3A-204ENST00000440431 MROH2AA6NES4 1674 aa6.2□□□□□ -1.42
SCN3A-204ENST00000440431 NBPF8Q3BBV2 869 aa6.2□□□□□ -1.42
SCN3A-204ENST00000440431 TIMELESSQ9UNS1 1208 aa6.2□□□□□ -1.42
SCN3A-204ENST00000440431 ZNF518AQ6AHZ1 1483 aa6.2□□□□□ -1.42
SCN3A-204ENST00000440431 TRPM1Q7Z4N2 1603 aa6.2□□□□□ -1.42
SCN3A-204ENST00000440431 UHRF1BP1Q6BDS2 1440 aa6.19□□□□□ -1.42
SCN3A-204ENST00000440431 TSPOAP1O95153 1857 aa6.19□□□□□ -1.42
SCN3A-204ENST00000440431 PIK3C2BO00750 1634 aa6.19□□□□□ -1.42
SCN3A-204ENST00000440431 NEURL4Q96JN8 1562 aa6.19□□□□□ -1.42
SCN3A-204ENST00000440431 REREQ9P2R6 1566 aa6.19□□□□□ -1.42
SCN3A-204ENST00000440431 TRHP20396 242 aaPredicted RBP6.18□□□□□ -1.42
SCN3A-204ENST00000440431 CYB5RLQ6IPT4 315 aa6.18□□□□□ -1.42
SCN3A-204ENST00000440431 TRPM2O94759 1503 aa6.18□□□□□ -1.42
SCN3A-204ENST00000440431 EFCAB6Q5THR3 1501 aa6.18□□□□□ -1.42
SCN3A-204ENST00000440431 DHX29Q7Z478 1369 aaKnown RBP6.18□□□□□ -1.42
SCN3A-204ENST00000440431 YEATS2Q9ULM3 1422 aa6.18□□□□□ -1.42
SCN3A-204ENST00000440431 A2MP01023 1474 aa6.17□□□□□ -1.42
SCN3A-204ENST00000440431 UGGT1Q9NYU2 1555 aa6.17□□□□□ -1.42
SCN3A-204ENST00000440431 CNGB1Q14028 1251 aaPredicted RBP6.17□□□□□ -1.42
SCN3A-204ENST00000440431 L3MBTL2Q969R5 705 aa6.17□□□□□ -1.42
SCN3A-204ENST00000440431 NUP155O75694 1391 aa6.17□□□□□ -1.42
SCN3A-204ENST00000440431 SYNMO15061 1565 aa6.17□□□□□ -1.42
SCN3A-204ENST00000440431 CAMSAP1Q5T5Y3 1602 aa6.16□□□□□ -1.42
SCN3A-204ENST00000440431 MADDQ8WXG6 1647 aa6.16□□□□□ -1.42
SCN3A-204ENST00000440431 PKD2Q13563 968 aa6.16□□□□□ -1.42
SCN3A-204ENST00000440431 ABCC3O15438 1527 aa6.16□□□□□ -1.42
SCN3A-204ENST00000440431 LAMC1P11047 1609 aa6.16□□□□□ -1.42
SCN3A-204ENST00000440431 C11orf95C9JLR9 678 aaPredicted RBP6.15□□□□□ -1.42
SCN3A-204ENST00000440431 BCL11AQ9H165 835 aa6.14□□□□□ -1.43
SCN3A-204ENST00000440431 SPAG9O60271 1321 aaKnown RBP6.14□□□□□ -1.43
SCN3A-204ENST00000440431 ZC3H13Q5T200 1668 aaKnown RBP6.14□□□□□ -1.43
SCN3A-204ENST00000440431 RAPGEF3O95398 923 aa6.14□□□□□ -1.43
SCN3A-204ENST00000440431 NRXN1Q9ULB1 1477 aa6.14□□□□□ -1.43
SCN3A-204ENST00000440431 MYO5BQ9ULV0 1848 aa6.14□□□□□ -1.43
SCN3A-204ENST00000440431 IQGAP1P46940 1657 aa6.14□□□□□ -1.43
SCN3A-204ENST00000440431 EIF4G2P78344 907 aaKnown RBP eCLIP6.14□□□□□ -1.43
SCN3A-204ENST00000440431 PLPPR3Q6T4P5 718 aa6.14□□□□□ -1.43
SCN3A-204ENST00000440431 PPLO60437 1756 aa6.13□□□□□ -1.43
SCN3A-204ENST00000440431 RALGAPBQ86X10 1494 aa6.13□□□□□ -1.43
SCN3A-204ENST00000440431 ADGRB3O60242 1522 aa6.13□□□□□ -1.43
SCN3A-204ENST00000440431 GTF3C3Q9Y5Q9 886 aa6.13□□□□□ -1.43
SCN3A-204ENST00000440431 NPATQ14207 1427 aa6.13□□□□□ -1.43
SCN3A-204ENST00000440431 PRAG1Q86YV5 1406 aa6.13□□□□□ -1.43
SCN3A-204ENST00000440431 AGLP35573 1532 aa6.12□□□□□ -1.43
SCN3A-204ENST00000440431 ARHGEF40Q8TER5 1519 aa6.12□□□□□ -1.43
SCN3A-204ENST00000440431 PREX1Q8TCU6 1659 aa6.12□□□□□ -1.43
SCN3A-204ENST00000440431 NOS1P29475 1434 aa6.12□□□□□ -1.43
SCN3A-204ENST00000440431 C14orf37Q86TY3 774 aa6.12□□□□□ -1.43
SCN3A-204ENST00000440431 KIAA1210Q9ULL0 1709 aa6.12□□□□□ -1.43
SCN3A-204ENST00000440431 PRKCSHP14314 528 aaPredicted RBP6.11□□□□□ -1.43
SCN3A-204ENST00000440431 CANXP27824 592 aaKnown RBP6.11□□□□□ -1.43
SCN3A-204ENST00000440431 GPRASP1Q5JY77 1395 aa6.11□□□□□ -1.43
SCN3A-204ENST00000440431 SETD1AO15047 1707 aaKnown RBP6.11□□□□□ -1.43
SCN3A-204ENST00000440431 KDM2AQ9Y2K7 1162 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms