RNA–Protein interactions for RNA: ENST00000440346.1

PTPA-221, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 4

Gene PTPA, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-221ENST00000440346 DCAF8L1A6NGE4 600 aa11.15□□□□□ -0.62
PTPA-221ENST00000440346 RTEL1-TNFRSF6BF6WH68 1400 aa11.15□□□□□ -0.62
PTPA-221ENST00000440346 POLR1AO95602 1720 aaPredicted RBP11.14□□□□□ -0.63
PTPA-221ENST00000440346 DNMT1P26358 1616 aaKnown RBP11.13□□□□□ -0.63
PTPA-221ENST00000440346 NCKAP5LQ9HCH0 1330 aa11.13□□□□□ -0.63
PTPA-221ENST00000440346 APLP2Q06481 763 aa11.13□□□□□ -0.63
PTPA-221ENST00000440346 GGT6Q6P531 493 aa11.13□□□□□ -0.63
PTPA-221ENST00000440346 SPATA31D1Q6ZQQ2 1576 aa11.12□□□□□ -0.63
PTPA-221ENST00000440346 DHX29Q7Z478 1369 aaKnown RBP11.12□□□□□ -0.63
PTPA-221ENST00000440346 DISP3Q9P2K9 1392 aa11.12□□□□□ -0.63
PTPA-221ENST00000440346 A2ML1A8K2U0 1454 aa11.12□□□□□ -0.63
PTPA-221ENST00000440346 CAMSAP2Q08AD1 1489 aa11.12□□□□□ -0.63
PTPA-221ENST00000440346 NCOA2Q15596 1464 aa11.12□□□□□ -0.63
PTPA-221ENST00000440346 CCDC141Q6ZP82 1450 aa11.12□□□□□ -0.63
PTPA-221ENST00000440346 ZNF335Q9H4Z2 1342 aaPredicted RBP11.11□□□□□ -0.63
PTPA-221ENST00000440346 FAM135AQ9P2D6 1515 aa11.11□□□□□ -0.63
PTPA-221ENST00000440346 ILDR2Q71H61 639 aa11.11□□□□□ -0.63
PTPA-221ENST00000440346 ARHGEF5Q12774 1597 aa11.11□□□□□ -0.63
PTPA-221ENST00000440346 PKD2Q13563 968 aa11.1□□□□□ -0.63
PTPA-221ENST00000440346 NEURL4Q96JN8 1562 aa11.1□□□□□ -0.63
PTPA-221ENST00000440346 KDM5DQ9BY66 1539 aa11.09□□□□□ -0.63
PTPA-221ENST00000440346 CACNB1Q02641 598 aaPredicted RBP11.09□□□□□ -0.63
PTPA-221ENST00000440346 PZPP20742 1482 aa11.08□□□□□ -0.64
PTPA-221ENST00000440346 RNF17Q9BXT8 1623 aaKnown RBP11.07□□□□□ -0.64
PTPA-221ENST00000440346 TNRQ92752 1358 aa11.06□□□□□ -0.64
PTPA-221ENST00000440346 KIF3BO15066 747 aa11.06□□□□□ -0.64
PTPA-221ENST00000440346 FBXO31Q5XUX0 539 aaPredicted RBP11.06□□□□□ -0.64
PTPA-221ENST00000440346 MAST1Q9Y2H9 1570 aa11.06□□□□□ -0.64
PTPA-221ENST00000440346 KANK4Q5T7N3 995 aaPredicted RBP11.05□□□□□ -0.64
PTPA-221ENST00000440346 RSPH4AQ5TD94 716 aa11.05□□□□□ -0.64
PTPA-221ENST00000440346 CFAP65Q6ZU64 1925 aaKnown RBP11.05□□□□□ -0.64
PTPA-221ENST00000440346 ZC3H13Q5T200 1668 aaKnown RBP11.04□□□□□ -0.64
PTPA-221ENST00000440346 UBAP1LF5GYI3 381 aa11.04□□□□□ -0.64
PTPA-221ENST00000440346 SOCS7O14512 581 aa11.04□□□□□ -0.64
PTPA-221ENST00000440346 DEPDC5O75140 1603 aa11.04□□□□□ -0.64
PTPA-221ENST00000440346 EIF2AK4Q9P2K8 1649 aaKnown RBP11.04□□□□□ -0.64
PTPA-221ENST00000440346 VWDEQ8N2E2 1590 aa11.03□□□□□ -0.64
PTPA-221ENST00000440346 MROH1Q8NDA8 1641 aa11.03□□□□□ -0.64
PTPA-221ENST00000440346 NLRP1Q9C000 1473 aa11.03□□□□□ -0.64
PTPA-221ENST00000440346 CEP152O94986 1710 aa11.03□□□□□ -0.64
PTPA-221ENST00000440346 CPS1P31327 1500 aa11.03□□□□□ -0.64
PTPA-221ENST00000440346 MYOM3Q5VTT5 1437 aa11.02□□□□□ -0.64
PTPA-221ENST00000440346 MIA2Q96PC5 1412 aa11.02□□□□□ -0.64
PTPA-221ENST00000440346 ABCC3O15438 1527 aa11.02□□□□□ -0.65
PTPA-221ENST00000440346 WASHC2CQ9Y4E1 1318 aa11.02□□□□□ -0.65
PTPA-221ENST00000440346 UGGT1Q9NYU2 1555 aa11.02□□□□□ -0.65
PTPA-221ENST00000440346 PTPN23Q9H3S7 1636 aa11.02□□□□□ -0.65
PTPA-221ENST00000440346 IQGAP1P46940 1657 aa11.01□□□□□ -0.65
PTPA-221ENST00000440346 MED14O60244 1454 aa11.01□□□□□ -0.65
PTPA-221ENST00000440346 SHANK2Q9UPX8 1470 aa11.01□□□□□ -0.65
PTPA-221ENST00000440346 STRCP1A6NGW2 1772 aa11.01□□□□□ -0.65
PTPA-221ENST00000440346 CROCC2H7BZ55 1655 aa11.01□□□□□ -0.65
PTPA-221ENST00000440346 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.01□□□□□ -0.65
PTPA-221ENST00000440346 ALKQ9UM73 1620 aa11□□□□□ -0.65
PTPA-221ENST00000440346 HOXD11P31277 338 aaPredicted RBP11□□□□□ -0.65
PTPA-221ENST00000440346 UBR1Q8IWV7 1749 aa10.99□□□□□ -0.65
PTPA-221ENST00000440346 TSPY4P0CV99 314 aa10.99□□□□□ -0.65
PTPA-221ENST00000440346 TSPY10P0CW01 314 aa10.99□□□□□ -0.65
PTPA-221ENST00000440346 ANKLE2Q86XL3 938 aa10.98□□□□□ -0.65
PTPA-221ENST00000440346 THEMISQ8N1K5 641 aaPredicted RBP10.98□□□□□ -0.65
PTPA-221ENST00000440346 CNKSR2Q8WXI2 1034 aa10.98□□□□□ -0.65
PTPA-221ENST00000440346 NPHP4O75161 1426 aaPredicted RBP10.98□□□□□ -0.65
PTPA-221ENST00000440346 ERVK-7P63135 1459 aa10.98□□□□□ -0.65
PTPA-221ENST00000440346 FGD6Q6ZV73 1430 aa10.97□□□□□ -0.65
PTPA-221ENST00000440346 DUOX2Q9NRD8 1548 aa10.96□□□□□ -0.65
PTPA-221ENST00000440346 SYNMO15061 1565 aa10.95□□□□□ -0.66
PTPA-221ENST00000440346 MED1Q15648 1581 aaPredicted RBP10.95□□□□□ -0.66
PTPA-221ENST00000440346 PRDM15P57071 1507 aaPredicted RBP10.95□□□□□ -0.66
PTPA-221ENST00000440346 XIRP1Q702N8 1843 aaKnown RBP10.95□□□□□ -0.66
PTPA-221ENST00000440346 HSPA1LP34931 641 aa10.94□□□□□ -0.66
PTPA-221ENST00000440346 TOM1O60784 492 aa10.93□□□□□ -0.66
PTPA-221ENST00000440346 LRRC7Q96NW7 1537 aa10.93□□□□□ -0.66
PTPA-221ENST00000440346 RRBP1Q9P2E9 1410 aaKnown RBP10.92□□□□□ -0.66
PTPA-221ENST00000440346 PIP4K2BP78356 416 aa10.92□□□□□ -0.66
PTPA-221ENST00000440346 SLIT1O75093 1534 aa10.92□□□□□ -0.66
PTPA-221ENST00000440346 ARHGAP23Q9P227 1491 aa10.92□□□□□ -0.66
PTPA-221ENST00000440346 ABCC5O15440 1437 aa10.92□□□□□ -0.66
PTPA-221ENST00000440346 ARHGAP31Q2M1Z3 1444 aa10.92□□□□□ -0.66
PTPA-221ENST00000440346 PIK3C2BO00750 1634 aa10.91□□□□□ -0.66
PTPA-221ENST00000440346 SCAF11Q99590 1463 aaKnown RBP10.91□□□□□ -0.66
PTPA-221ENST00000440346 ERBINQ96RT1 1412 aa10.91□□□□□ -0.66
PTPA-221ENST00000440346 KIF15Q9NS87 1388 aa10.9□□□□□ -0.66
PTPA-221ENST00000440346 KDM5AP29375 1690 aaKnown RBP10.9□□□□□ -0.66
PTPA-221ENST00000440346 RNF216Q9NWF9 866 aaPredicted RBP10.9□□□□□ -0.66
PTPA-221ENST00000440346 PPARGC1BQ86YN6 1023 aaKnown RBP10.89□□□□□ -0.67
PTPA-221ENST00000440346 DAPK1P53355 1430 aa10.88□□□□□ -0.67
PTPA-221ENST00000440346 LTKP29376 864 aa10.87□□□□□ -0.67
PTPA-221ENST00000440346 LMTK2Q8IWU2 1503 aa10.87□□□□□ -0.67
PTPA-221ENST00000440346 RRP7BPQ9NSQ0 103 aa10.86□□□□□ -0.67
PTPA-221ENST00000440346 TXNDC2Q86VQ3 553 aa10.85□□□□□ -0.67
PTPA-221ENST00000440346 RNF39Q9H2S5 420 aa10.85□□□□□ -0.67
PTPA-221ENST00000440346 MYO5BQ9ULV0 1848 aa10.85□□□□□ -0.67
PTPA-221ENST00000440346 GCC2Q8IWJ2 1684 aa10.85□□□□□ -0.67
PTPA-221ENST00000440346 EFCAB6Q5THR3 1501 aa10.84□□□□□ -0.67
PTPA-221ENST00000440346 TMEM2Q9UHN6 1383 aa10.84□□□□□ -0.67
PTPA-221ENST00000440346 ADGRL2O95490 1459 aa10.84□□□□□ -0.67
PTPA-221ENST00000440346 TET3O43151 1660 aa10.83□□□□□ -0.68
PTPA-221ENST00000440346 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.83□□□□□ -0.68
PTPA-221ENST00000440346 NOS1P29475 1434 aa10.83□□□□□ -0.68
PTPA-221ENST00000440346 KANK1Q14678 1352 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms