RNA–Protein interactions for RNA: ENST00000440293.5

HDAC7-213, Transcript of histone deacetylase 7, humanhuman

TSL 4

Gene HDAC7, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-213ENST00000440293 NCOA2Q15596 1464 aa28.21■■■□□ 2.11
HDAC7-213ENST00000440293 A2ML1A8K2U0 1454 aa28.18■■■□□ 2.1
HDAC7-213ENST00000440293 ZNF335Q9H4Z2 1342 aaPredicted RBP28.17■■■□□ 2.1
HDAC7-213ENST00000440293 CCDC141Q6ZP82 1450 aa28.16■■■□□ 2.1
HDAC7-213ENST00000440293 KIF3BO15066 747 aa28.13■■■□□ 2.09
HDAC7-213ENST00000440293 SOCS7O14512 581 aa28.11■■■□□ 2.09
HDAC7-213ENST00000440293 ILDR2Q71H61 639 aa28.11■■■□□ 2.09
HDAC7-213ENST00000440293 PZPP20742 1482 aa28.1■■■□□ 2.09
HDAC7-213ENST00000440293 TSPY4P0CV99 314 aa28.09■■■□□ 2.09
HDAC7-213ENST00000440293 TSPY10P0CW01 314 aa28.09■■■□□ 2.09
HDAC7-213ENST00000440293 DNMT1P26358 1616 aaKnown RBP28.09■■■□□ 2.09
HDAC7-213ENST00000440293 TNRQ92752 1358 aa28.09■■■□□ 2.09
HDAC7-213ENST00000440293 CAMSAP2Q08AD1 1489 aa28.08■■■□□ 2.09
HDAC7-213ENST00000440293 KDM5DQ9BY66 1539 aa28.08■■■□□ 2.09
HDAC7-213ENST00000440293 UBAP1LF5GYI3 381 aa28.08■■■□□ 2.09
HDAC7-213ENST00000440293 WASHC2CQ9Y4E1 1318 aa28.08■■■□□ 2.09
HDAC7-213ENST00000440293 SPATA31D1Q6ZQQ2 1576 aa28.06■■■□□ 2.08
HDAC7-213ENST00000440293 ARHGEF5Q12774 1597 aa28.05■■■□□ 2.08
HDAC7-213ENST00000440293 THEMISQ8N1K5 641 aaPredicted RBP28.04■■■□□ 2.08
HDAC7-213ENST00000440293 FBXO31Q5XUX0 539 aaPredicted RBP28.03■■■□□ 2.08
HDAC7-213ENST00000440293 NLRP1Q9C000 1473 aa28.02■■■□□ 2.08
HDAC7-213ENST00000440293 MIA2Q96PC5 1412 aa28.01■■■□□ 2.08
HDAC7-213ENST00000440293 ANKLE2Q86XL3 938 aa28.01■■■□□ 2.07
HDAC7-213ENST00000440293 MYOM3Q5VTT5 1437 aa28.01■■■□□ 2.07
HDAC7-213ENST00000440293 CPS1P31327 1500 aa27.99■■■□□ 2.07
HDAC7-213ENST00000440293 TOM1O60784 492 aa27.94■■■□□ 2.06
HDAC7-213ENST00000440293 MED14O60244 1454 aa27.94■■■□□ 2.06
HDAC7-213ENST00000440293 SHANK2Q9UPX8 1470 aa27.94■■■□□ 2.06
HDAC7-213ENST00000440293 NEURL4Q96JN8 1562 aa27.93■■■□□ 2.06
HDAC7-213ENST00000440293 POLR1AO95602 1720 aaPredicted RBP27.92■■■□□ 2.06
HDAC7-213ENST00000440293 MAST1Q9Y2H9 1570 aa27.92■■■□□ 2.06
HDAC7-213ENST00000440293 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.92■■■□□ 2.06
HDAC7-213ENST00000440293 UGGT1Q9NYU2 1555 aa27.91■■■□□ 2.06
HDAC7-213ENST00000440293 DEPDC5O75140 1603 aa27.89■■■□□ 2.06
HDAC7-213ENST00000440293 RNF17Q9BXT8 1623 aaKnown RBP27.89■■■□□ 2.05
HDAC7-213ENST00000440293 NPHP4O75161 1426 aaPredicted RBP27.86■■■□□ 2.05
HDAC7-213ENST00000440293 PPARGC1BQ86YN6 1023 aaKnown RBP27.86■■■□□ 2.05
HDAC7-213ENST00000440293 ZC3H13Q5T200 1668 aaKnown RBP27.86■■■□□ 2.05
HDAC7-213ENST00000440293 EIF2AK4Q9P2K8 1649 aaKnown RBP27.85■■■□□ 2.05
HDAC7-213ENST00000440293 ABCC3O15438 1527 aa27.84■■■□□ 2.05
HDAC7-213ENST00000440293 FGD6Q6ZV73 1430 aa27.84■■■□□ 2.05
HDAC7-213ENST00000440293 VWDEQ8N2E2 1590 aa27.82■■■□□ 2.04
HDAC7-213ENST00000440293 HSPA1LP34931 641 aa27.79■■■□□ 2.04
HDAC7-213ENST00000440293 ERVK-7P63135 1459 aa27.78■■■□□ 2.04
HDAC7-213ENST00000440293 DUOX2Q9NRD8 1548 aa27.77■■■□□ 2.04
HDAC7-213ENST00000440293 PIP4K2BP78356 416 aa27.76■■■□□ 2.03
HDAC7-213ENST00000440293 PTPN23Q9H3S7 1636 aa27.75■■■□□ 2.03
HDAC7-213ENST00000440293 SCAF1Q9H7N4 1312 aaKnown RBP27.75■■■□□ 2.03
HDAC7-213ENST00000440293 FAM50AQ14320 339 aaKnown RBP27.75■■■□□ 2.03
HDAC7-213ENST00000440293 ARHGAP31Q2M1Z3 1444 aa27.75■■■□□ 2.03
HDAC7-213ENST00000440293 IQGAP1P46940 1657 aa27.74■■■□□ 2.03
HDAC7-213ENST00000440293 MROH1Q8NDA8 1641 aa27.73■■■□□ 2.03
HDAC7-213ENST00000440293 ABCC5O15440 1437 aa27.7■■■□□ 2.03
HDAC7-213ENST00000440293 ERBINQ96RT1 1412 aa27.7■■■□□ 2.03
HDAC7-213ENST00000440293 KIF15Q9NS87 1388 aa27.67■■■□□ 2.02
HDAC7-213ENST00000440293 SCAF11Q99590 1463 aaKnown RBP27.66■■■□□ 2.02
HDAC7-213ENST00000440293 PRDM15P57071 1507 aaPredicted RBP27.66■■■□□ 2.02
HDAC7-213ENST00000440293 LRRC7Q96NW7 1537 aa27.66■■■□□ 2.02
HDAC7-213ENST00000440293 DAPK1P53355 1430 aa27.66■■■□□ 2.02
HDAC7-213ENST00000440293 ARHGAP23Q9P227 1491 aa27.65■■■□□ 2.02
HDAC7-213ENST00000440293 SLIT1O75093 1534 aa27.65■■■□□ 2.02
HDAC7-213ENST00000440293 SYNMO15061 1565 aa27.65■■■□□ 2.02
HDAC7-213ENST00000440293 ALKQ9UM73 1620 aa27.63■■■□□ 2.01
HDAC7-213ENST00000440293 CHIC2Q9UKJ5 165 aa27.63■■■□□ 2.01
HDAC7-213ENST00000440293 MED1Q15648 1581 aaPredicted RBP27.63■■■□□ 2.01
HDAC7-213ENST00000440293 UBR1Q8IWV7 1749 aa27.63■■■□□ 2.01
HDAC7-213ENST00000440293 TXNDC2Q86VQ3 553 aa27.62■■■□□ 2.01
HDAC7-213ENST00000440293 EID1Q9Y6B2 187 aa27.62■■■□□ 2.01
HDAC7-213ENST00000440293 RRP7BPQ9NSQ0 103 aa27.61■■■□□ 2.01
HDAC7-213ENST00000440293 KANK1Q14678 1352 aa27.6■■■□□ 2.01
HDAC7-213ENST00000440293 CEP152O94986 1710 aa27.6■■■□□ 2.01
HDAC7-213ENST00000440293 LTKP29376 864 aa27.59■■■□□ 2.01
HDAC7-213ENST00000440293 ANKRD30AQ9BXX3 1397 aa27.57■■■□□ 2
HDAC7-213ENST00000440293 STRCP1A6NGW2 1772 aa27.56■■■□□ 2
HDAC7-213ENST00000440293 TMEM2Q9UHN6 1383 aa27.55■■■□□ 2
HDAC7-213ENST00000440293 CROCC2H7BZ55 1655 aa27.55■■■□□ 2
HDAC7-213ENST00000440293 LMTK2Q8IWU2 1503 aa27.54■■■□□ 2
HDAC7-213ENST00000440293 KDM5AP29375 1690 aaKnown RBP27.52■■■□□ 2
HDAC7-213ENST00000440293 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.51■■□□□ 1.99
HDAC7-213ENST00000440293 PHF23Q9BUL5 403 aaPredicted RBP27.5■■□□□ 1.99
HDAC7-213ENST00000440293 STAG3Q9UJ98 1225 aa27.5■■□□□ 1.99
HDAC7-213ENST00000440293 ITGAEP38570 1179 aa27.49■■□□□ 1.99
HDAC7-213ENST00000440293 CFAP65Q6ZU64 1925 aaKnown RBP27.48■■□□□ 1.99
HDAC7-213ENST00000440293 IDI1Q13907 227 aa27.47■■□□□ 1.99
HDAC7-213ENST00000440293 RRBP1Q9P2E9 1410 aaKnown RBP27.47■■□□□ 1.99
HDAC7-213ENST00000440293 SLC52A1Q9NWF4 448 aa27.46■■□□□ 1.99
HDAC7-213ENST00000440293 PIK3C2BO00750 1634 aa27.45■■□□□ 1.99
HDAC7-213ENST00000440293 EFCAB6Q5THR3 1501 aa27.45■■□□□ 1.98
HDAC7-213ENST00000440293 ADGRL2O95490 1459 aa27.44■■□□□ 1.98
HDAC7-213ENST00000440293 NOS1P29475 1434 aa27.43■■□□□ 1.98
HDAC7-213ENST00000440293 FAM135BQ49AJ0 1406 aa27.43■■□□□ 1.98
HDAC7-213ENST00000440293 KCNA6P17658 529 aa27.43■■□□□ 1.98
HDAC7-213ENST00000440293 ROCK1Q13464 1354 aa27.4■■□□□ 1.98
HDAC7-213ENST00000440293 TET3O43151 1660 aa27.38■■□□□ 1.97
HDAC7-213ENST00000440293 RPRD2Q5VT52 1461 aaKnown RBP27.38■■□□□ 1.97
HDAC7-213ENST00000440293 TMEM94Q12767 1356 aa27.35■■□□□ 1.97
HDAC7-213ENST00000440293 ANKRD50Q9ULJ7 1429 aa27.34■■□□□ 1.97
HDAC7-213ENST00000440293 HDGFP51858 240 aaKnown RBP27.34■■□□□ 1.97
HDAC7-213ENST00000440293 XIRP1Q702N8 1843 aaKnown RBP27.34■■□□□ 1.97
HDAC7-213ENST00000440293 ADGRB3O60242 1522 aa27.33■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms