RNA–Protein interactions for RNA: ENST00000439987.6

IFT140-204, Transcript of intraflagellar transport 140, humanhuman

TSL 2

Gene IFT140, Length 2,580 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-204ENST00000439987 KDM5CP41229 1560 aa21.23■□□□□ 0.99
IFT140-204ENST00000439987 DHX29Q7Z478 1369 aaKnown RBP21.21■□□□□ 0.99
IFT140-204ENST00000439987 DEPDC5O75140 1603 aa21.2■□□□□ 0.99
IFT140-204ENST00000439987 EIF2AK4Q9P2K8 1649 aaKnown RBP21.19■□□□□ 0.98
IFT140-204ENST00000439987 MLH3Q9UHC1 1453 aa21.19■□□□□ 0.98
IFT140-204ENST00000439987 DIP2BQ9P265 1576 aa21.17■□□□□ 0.98
IFT140-204ENST00000439987 NBPF8Q3BBV2 869 aa21.17■□□□□ 0.98
IFT140-204ENST00000439987 HIRIP3Q9BW71 556 aaPredicted RBP21.17■□□□□ 0.98
IFT140-204ENST00000439987 PLA2R1Q13018 1463 aa21.17■□□□□ 0.98
IFT140-204ENST00000439987 MIER1Q8N108 512 aa21.16■□□□□ 0.98
IFT140-204ENST00000439987 HECW2Q9P2P5 1572 aa21.16■□□□□ 0.98
IFT140-204ENST00000439987 CCDC144AA2RUR9 1427 aa21.15■□□□□ 0.98
IFT140-204ENST00000439987 CENPBP07199 599 aaPredicted RBP21.15■□□□□ 0.98
IFT140-204ENST00000439987 FAM69CQ0P6D2 419 aa21.15■□□□□ 0.98
IFT140-204ENST00000439987 KIF3BO15066 747 aa21.14■□□□□ 0.98
IFT140-204ENST00000439987 ATP10AO60312 1499 aa21.14■□□□□ 0.97
IFT140-204ENST00000439987 A2MP01023 1474 aa21.13■□□□□ 0.97
IFT140-204ENST00000439987 VWDEQ8N2E2 1590 aa21.13■□□□□ 0.97
IFT140-204ENST00000439987 PRDM15P57071 1507 aaPredicted RBP21.12■□□□□ 0.97
IFT140-204ENST00000439987 KANK1Q14678 1352 aa21.12■□□□□ 0.97
IFT140-204ENST00000439987 RAPGEF3O95398 923 aa21.11■□□□□ 0.97
IFT140-204ENST00000439987 MROH1Q8NDA8 1641 aa21.1■□□□□ 0.97
IFT140-204ENST00000439987 E9PCH4 1651 aa21.1■□□□□ 0.97
IFT140-204ENST00000439987 RICTORQ6R327 1708 aa21.09■□□□□ 0.97
IFT140-204ENST00000439987 EIF4G2P78344 907 aaKnown RBP eCLIP21.09■□□□□ 0.974e-7■■■□□ 18.2
IFT140-204ENST00000439987 TET3O43151 1660 aa21.09■□□□□ 0.97
IFT140-204ENST00000439987 UHRF1BP1Q6BDS2 1440 aa21.08■□□□□ 0.97
IFT140-204ENST00000439987 HSPA5P11021 654 aaKnown RBP21.08■□□□□ 0.97
IFT140-204ENST00000439987 ABCA6Q8N139 1617 aa21.08■□□□□ 0.97
IFT140-204ENST00000439987 FRMPD1Q5SYB0 1578 aa21.08■□□□□ 0.97
IFT140-204ENST00000439987 RNF17Q9BXT8 1623 aaKnown RBP21.06■□□□□ 0.96
IFT140-204ENST00000439987 DDX10Q13206 875 aaKnown RBP21.04■□□□□ 0.96
IFT140-204ENST00000439987 ZNF326Q5BKZ1 582 aaKnown RBP21.04■□□□□ 0.96
IFT140-204ENST00000439987 PPRC1Q5VV67 1664 aaKnown RBP21.03■□□□□ 0.96
IFT140-204ENST00000439987 DCAF11Q8TEB1 546 aa21.03■□□□□ 0.96
IFT140-204ENST00000439987 PTPRTO14522 1441 aa21.03■□□□□ 0.96
IFT140-204ENST00000439987 TRPM2O94759 1503 aa21.03■□□□□ 0.96
IFT140-204ENST00000439987 BCORL1Q5H9F3 1711 aa21.03■□□□□ 0.96
IFT140-204ENST00000439987 DIP2CQ9Y2E4 1556 aa21.02■□□□□ 0.96
IFT140-204ENST00000439987 TSPOAP1O95153 1857 aa21.02■□□□□ 0.96
IFT140-204ENST00000439987 SPHKAPQ2M3C7 1700 aa21.01■□□□□ 0.95
IFT140-204ENST00000439987 GTF3C3Q9Y5Q9 886 aa21.01■□□□□ 0.95
IFT140-204ENST00000439987 KDM2AQ9Y2K7 1162 aa21■□□□□ 0.95
IFT140-204ENST00000439987 SPATA31E1Q6ZUB1 1445 aa21■□□□□ 0.95
IFT140-204ENST00000439987 RALGAPBQ86X10 1494 aa21■□□□□ 0.95
IFT140-204ENST00000439987 LMTK2Q8IWU2 1503 aa21■□□□□ 0.95
IFT140-204ENST00000439987 RGL3Q3MIN7 710 aa20.99■□□□□ 0.95
IFT140-204ENST00000439987 EFCAB6Q5THR3 1501 aa20.99■□□□□ 0.95
IFT140-204ENST00000439987 ZMYM4Q5VZL5 1548 aa20.98■□□□□ 0.95
IFT140-204ENST00000439987 KIF13AQ9H1H9 1805 aa20.97■□□□□ 0.95
IFT140-204ENST00000439987 YEATS2Q9ULM3 1422 aa20.96■□□□□ 0.95
IFT140-204ENST00000439987 CEP152O94986 1710 aa20.96■□□□□ 0.95
IFT140-204ENST00000439987 PRAG1Q86YV5 1406 aa20.95■□□□□ 0.94
IFT140-204ENST00000439987 GGT6Q6P531 493 aa20.95■□□□□ 0.94
IFT140-204ENST00000439987 CLTCL1P53675 1640 aa20.94■□□□□ 0.94
IFT140-204ENST00000439987 WASHC2AQ641Q2 1341 aa20.94■□□□□ 0.94
IFT140-204ENST00000439987 USP47Q96K76 1375 aa20.93■□□□□ 0.94
IFT140-204ENST00000439987 CARD11Q9BXL7 1154 aa20.9■□□□□ 0.94
IFT140-204ENST00000439987 ABCC3O15438 1527 aa20.9■□□□□ 0.94
IFT140-204ENST00000439987 TRPM1Q7Z4N2 1603 aa20.9■□□□□ 0.94
IFT140-204ENST00000439987 WASHC2CQ9Y4E1 1318 aa20.89■□□□□ 0.93
IFT140-204ENST00000439987 C11orf95C9JLR9 678 aaPredicted RBP20.88■□□□□ 0.93
IFT140-204ENST00000439987 ROCK2O75116 1388 aaKnown RBP20.88■□□□□ 0.93
IFT140-204ENST00000439987 CCDC7Q96M83 1385 aa20.88■□□□□ 0.93
IFT140-204ENST00000439987 NPATQ14207 1427 aa20.87■□□□□ 0.93
IFT140-204ENST00000439987 NEURL4Q96JN8 1562 aa20.87■□□□□ 0.93
IFT140-204ENST00000439987 POLR1AO95602 1720 aaPredicted RBP20.86■□□□□ 0.93
IFT140-204ENST00000439987 UGGT1Q9NYU2 1555 aa20.85■□□□□ 0.93
IFT140-204ENST00000439987 CAMSAP1Q5T5Y3 1602 aa20.84■□□□□ 0.93
IFT140-204ENST00000439987 STAC3Q96MF2 364 aa20.84■□□□□ 0.93
IFT140-204ENST00000439987 GPRASP1Q5JY77 1395 aa20.84■□□□□ 0.93
IFT140-204ENST00000439987 ZC3H13Q5T200 1668 aaKnown RBP20.83■□□□□ 0.92
IFT140-204ENST00000439987 KIF7Q2M1P5 1343 aa20.82■□□□□ 0.92
IFT140-204ENST00000439987 REREQ9P2R6 1566 aa20.82■□□□□ 0.92
IFT140-204ENST00000439987 COL17A1Q9UMD9 1497 aaPredicted RBP20.82■□□□□ 0.92
IFT140-204ENST00000439987 KIF1BO60333 1816 aa20.81■□□□□ 0.92
IFT140-204ENST00000439987 YTHDC1Q96MU7 727 aaKnown RBP20.81■□□□□ 0.92
IFT140-204ENST00000439987 CNTLNQ9NXG0 1405 aa20.81■□□□□ 0.92
IFT140-204ENST00000439987 ANP32CO43423 234 aa20.81■□□□□ 0.92
IFT140-204ENST00000439987 NBPF1Q3BBV0 1214 aa20.81■□□□□ 0.92
IFT140-204ENST00000439987 LAMC1P11047 1609 aa20.8■□□□□ 0.92
IFT140-204ENST00000439987 MADDQ8WXG6 1647 aa20.8■□□□□ 0.92
IFT140-204ENST00000439987 CFAP65Q6ZU64 1925 aaKnown RBP20.79■□□□□ 0.92
IFT140-204ENST00000439987 ARHGAP31Q2M1Z3 1444 aa20.79■□□□□ 0.92
IFT140-204ENST00000439987 AGLP35573 1532 aa20.78■□□□□ 0.92
IFT140-204ENST00000439987 ST20-MTHFSA0A0A6YYL1 179 aa20.77■□□□□ 0.92
IFT140-204ENST00000439987 NOS1P29475 1434 aa20.77■□□□□ 0.92
IFT140-204ENST00000439987 ARID4BQ4LE39 1312 aaPredicted RBP20.76■□□□□ 0.91
IFT140-204ENST00000439987 SIGLEC1Q9BZZ2 1709 aa20.76■□□□□ 0.91
IFT140-204ENST00000439987 MROH2AA6NES4 1674 aa20.75■□□□□ 0.91
IFT140-204ENST00000439987 ADGRB3O60242 1522 aa20.75■□□□□ 0.91
IFT140-204ENST00000439987 ARHGEF40Q8TER5 1519 aa20.74■□□□□ 0.91
IFT140-204ENST00000439987 MYOM2P54296 1465 aa20.73■□□□□ 0.91
IFT140-204ENST00000439987 IFT172Q9UG01 1749 aa20.72■□□□□ 0.91
IFT140-204ENST00000439987 SYNMO15061 1565 aa20.72■□□□□ 0.91
IFT140-204ENST00000439987 CCER2I3L3R5 266 aa20.71■□□□□ 0.91
IFT140-204ENST00000439987 PIK3C2BO00750 1634 aa20.71■□□□□ 0.91
IFT140-204ENST00000439987 PPP6R1Q9UPN7 881 aa20.7■□□□□ 0.9
IFT140-204ENST00000439987 CHGAP10645 457 aaKnown RBP20.69■□□□□ 0.9
IFT140-204ENST00000439987 KIAA1210Q9ULL0 1709 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms