RNA–Protein interactions for RNA: ENST00000439976.5

LAMB1-205, Transcript of laminin subunit beta 1, humanhuman

TSL 5

Gene LAMB1, Length 703 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-205ENST00000439976 NCOA2Q15596 1464 aa26.17■■□□□ 1.78
LAMB1-205ENST00000439976 FBXO31Q5XUX0 539 aaPredicted RBP26.16■■□□□ 1.78
LAMB1-205ENST00000439976 CAMSAP2Q08AD1 1489 aa26.16■■□□□ 1.78
LAMB1-205ENST00000439976 NEURL4Q96JN8 1562 aa26.16■■□□□ 1.78
LAMB1-205ENST00000439976 KIF3BO15066 747 aa26.15■■□□□ 1.78
LAMB1-205ENST00000439976 PZPP20742 1482 aa26.15■■□□□ 1.78
LAMB1-205ENST00000439976 KDM5DQ9BY66 1539 aa26.14■■□□□ 1.78
LAMB1-205ENST00000439976 TNRQ92752 1358 aa26.14■■□□□ 1.78
LAMB1-205ENST00000439976 FAM135AQ9P2D6 1515 aa26.14■■□□□ 1.77
LAMB1-205ENST00000439976 POLR1AO95602 1720 aaPredicted RBP26.11■■□□□ 1.77
LAMB1-205ENST00000439976 RSPH4AQ5TD94 716 aa26.09■■□□□ 1.77
LAMB1-205ENST00000439976 ARHGEF5Q12774 1597 aa26.08■■□□□ 1.77
LAMB1-205ENST00000439976 WASHC2CQ9Y4E1 1318 aa26.06■■□□□ 1.76
LAMB1-205ENST00000439976 MIA2Q96PC5 1412 aa26.05■■□□□ 1.76
LAMB1-205ENST00000439976 SHANK2Q9UPX8 1470 aa26.04■■□□□ 1.76
LAMB1-205ENST00000439976 CPS1P31327 1500 aa26.04■■□□□ 1.76
LAMB1-205ENST00000439976 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.03■■□□□ 1.76
LAMB1-205ENST00000439976 NLRP1Q9C000 1473 aa26.02■■□□□ 1.76
LAMB1-205ENST00000439976 VWDEQ8N2E2 1590 aa26.01■■□□□ 1.75
LAMB1-205ENST00000439976 RNF17Q9BXT8 1623 aaKnown RBP25.99■■□□□ 1.75
LAMB1-205ENST00000439976 MED14O60244 1454 aa25.99■■□□□ 1.75
LAMB1-205ENST00000439976 UGGT1Q9NYU2 1555 aa25.99■■□□□ 1.75
LAMB1-205ENST00000439976 ANKLE2Q86XL3 938 aa25.98■■□□□ 1.75
LAMB1-205ENST00000439976 DEPDC5O75140 1603 aa25.98■■□□□ 1.75
LAMB1-205ENST00000439976 THEMISQ8N1K5 641 aaPredicted RBP25.97■■□□□ 1.75
LAMB1-205ENST00000439976 MAST1Q9Y2H9 1570 aa25.97■■□□□ 1.75
LAMB1-205ENST00000439976 LRRC9Q6ZRR7 1453 aa25.97■■□□□ 1.75
LAMB1-205ENST00000439976 TSPY4P0CV99 314 aa25.96■■□□□ 1.75
LAMB1-205ENST00000439976 TSPY10P0CW01 314 aa25.96■■□□□ 1.75
LAMB1-205ENST00000439976 HSPA1LP34931 641 aa25.96■■□□□ 1.75
LAMB1-205ENST00000439976 ABCC3O15438 1527 aa25.96■■□□□ 1.75
LAMB1-205ENST00000439976 NPHP4O75161 1426 aaPredicted RBP25.95■■□□□ 1.74
LAMB1-205ENST00000439976 ALKQ9UM73 1620 aa25.95■■□□□ 1.74
LAMB1-205ENST00000439976 MROH1Q8NDA8 1641 aa25.93■■□□□ 1.74
LAMB1-205ENST00000439976 VPS8Q8N3P4 1428 aa25.92■■□□□ 1.74
LAMB1-205ENST00000439976 TOM1O60784 492 aa25.92■■□□□ 1.74
LAMB1-205ENST00000439976 PIP4K2BP78356 416 aa25.92■■□□□ 1.74
LAMB1-205ENST00000439976 ZC3H13Q5T200 1668 aaKnown RBP25.92■■□□□ 1.74
LAMB1-205ENST00000439976 IQGAP1P46940 1657 aa25.9■■□□□ 1.74
LAMB1-205ENST00000439976 EIF2AK4Q9P2K8 1649 aaKnown RBP25.9■■□□□ 1.74
LAMB1-205ENST00000439976 ERVK-7P63135 1459 aa25.89■■□□□ 1.73
LAMB1-205ENST00000439976 MED1Q15648 1581 aaPredicted RBP25.89■■□□□ 1.73
LAMB1-205ENST00000439976 STRCP1A6NGW2 1772 aa25.89■■□□□ 1.73
LAMB1-205ENST00000439976 SCAF1Q9H7N4 1312 aaKnown RBP25.88■■□□□ 1.73
LAMB1-205ENST00000439976 KANK4Q5T7N3 995 aaPredicted RBP25.88■■□□□ 1.73
LAMB1-205ENST00000439976 MAP3K1Q13233 1512 aa25.84■■□□□ 1.73
LAMB1-205ENST00000439976 CEP152O94986 1710 aa25.83■■□□□ 1.73
LAMB1-205ENST00000439976 MYOM3Q5VTT5 1437 aa25.83■■□□□ 1.73
LAMB1-205ENST00000439976 LRRC7Q96NW7 1537 aa25.83■■□□□ 1.72
LAMB1-205ENST00000439976 UBR1Q8IWV7 1749 aa25.82■■□□□ 1.72
LAMB1-205ENST00000439976 LOC105371045A0A1W2PR82 267 aa25.8■■□□□ 1.72
LAMB1-205ENST00000439976 CFAP65Q6ZU64 1925 aaKnown RBP25.8■■□□□ 1.72
LAMB1-205ENST00000439976 DUOX2Q9NRD8 1548 aa25.79■■□□□ 1.72
LAMB1-205ENST00000439976 SYNMO15061 1565 aa25.77■■□□□ 1.72
LAMB1-205ENST00000439976 PRDM15P57071 1507 aaPredicted RBP25.75■■□□□ 1.71
LAMB1-205ENST00000439976 SCAF11Q99590 1463 aaKnown RBP25.75■■□□□ 1.71
LAMB1-205ENST00000439976 ARHGAP23Q9P227 1491 aa25.75■■□□□ 1.71
LAMB1-205ENST00000439976 ARHGAP31Q2M1Z3 1444 aa25.74■■□□□ 1.71
LAMB1-205ENST00000439976 SLIT1O75093 1534 aa25.73■■□□□ 1.71
LAMB1-205ENST00000439976 LTKP29376 864 aa25.73■■□□□ 1.71
LAMB1-205ENST00000439976 ABCC5O15440 1437 aa25.72■■□□□ 1.71
LAMB1-205ENST00000439976 KIF15Q9NS87 1388 aa25.72■■□□□ 1.71
LAMB1-205ENST00000439976 CROCC2H7BZ55 1655 aa25.71■■□□□ 1.71
LAMB1-205ENST00000439976 ERBINQ96RT1 1412 aa25.71■■□□□ 1.71
LAMB1-205ENST00000439976 XIRP1Q702N8 1843 aaKnown RBP25.67■■□□□ 1.7
LAMB1-205ENST00000439976 TXNDC2Q86VQ3 553 aa25.66■■□□□ 1.7
LAMB1-205ENST00000439976 RRP7BPQ9NSQ0 103 aa25.66■■□□□ 1.7
LAMB1-205ENST00000439976 PTPN23Q9H3S7 1636 aa25.66■■□□□ 1.7
LAMB1-205ENST00000439976 PIK3C2BO00750 1634 aa25.65■■□□□ 1.7
LAMB1-205ENST00000439976 DAPK1P53355 1430 aa25.63■■□□□ 1.69
LAMB1-205ENST00000439976 SENP3Q9H4L4 574 aaPredicted RBP25.62■■□□□ 1.69
LAMB1-205ENST00000439976 TMEM2Q9UHN6 1383 aa25.61■■□□□ 1.69
LAMB1-205ENST00000439976 LMTK2Q8IWU2 1503 aa25.59■■□□□ 1.69
LAMB1-205ENST00000439976 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.59■■□□□ 1.691e-7■□□□□ 10.9
LAMB1-205ENST00000439976 PHF23Q9BUL5 403 aaPredicted RBP25.59■■□□□ 1.69
LAMB1-205ENST00000439976 KDM5AP29375 1690 aaKnown RBP25.58■■□□□ 1.68
LAMB1-205ENST00000439976 FGD6Q6ZV73 1430 aa25.57■■□□□ 1.68
LAMB1-205ENST00000439976 EID1Q9Y6B2 187 aa25.57■■□□□ 1.68
LAMB1-205ENST00000439976 EFCAB6Q5THR3 1501 aa25.55■■□□□ 1.68
LAMB1-205ENST00000439976 IDI1Q13907 227 aa25.55■■□□□ 1.68
LAMB1-205ENST00000439976 KANK1Q14678 1352 aa25.54■■□□□ 1.68
LAMB1-205ENST00000439976 TET3O43151 1660 aa25.53■■□□□ 1.68
LAMB1-205ENST00000439976 RGS17Q9UGC6 210 aaPredicted RBP25.52■■□□□ 1.68
LAMB1-205ENST00000439976 NOS1P29475 1434 aa25.52■■□□□ 1.68
LAMB1-205ENST00000439976 ANKRD30AQ9BXX3 1397 aa25.51■■□□□ 1.67
LAMB1-205ENST00000439976 TMEM94Q12767 1356 aa25.5■■□□□ 1.67
LAMB1-205ENST00000439976 FAM135BQ49AJ0 1406 aa25.5■■□□□ 1.67
LAMB1-205ENST00000439976 CHIC2Q9UKJ5 165 aa25.5■■□□□ 1.67
LAMB1-205ENST00000439976 STAG3Q9UJ98 1225 aa25.48■■□□□ 1.67
LAMB1-205ENST00000439976 KCNA6P17658 529 aa25.47■■□□□ 1.67
LAMB1-205ENST00000439976 ADGRB3O60242 1522 aa25.47■■□□□ 1.67
LAMB1-205ENST00000439976 SLC26A8Q96RN1 970 aa25.45■■□□□ 1.66
LAMB1-205ENST00000439976 ADGRL2O95490 1459 aa25.45■■□□□ 1.66
LAMB1-205ENST00000439976 APLP2Q06481 763 aa25.44■■□□□ 1.66
LAMB1-205ENST00000439976 NWD1Q149M9 1564 aa25.44■■□□□ 1.66
LAMB1-205ENST00000439976 RBM33Q96EV2 1170 aaKnown RBP25.41■■□□□ 1.66
LAMB1-205ENST00000439976 ROBO1Q9Y6N7 1651 aa25.41■■□□□ 1.66
LAMB1-205ENST00000439976 NKTRP30414 1462 aaKnown RBP25.4■■□□□ 1.66
LAMB1-205ENST00000439976 PROSER2Q86WR7 435 aaPredicted RBP25.39■■□□□ 1.66
LAMB1-205ENST00000439976 SLC52A1Q9NWF4 448 aa25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms