RNA–Protein interactions for RNA: ENST00000439974.3

ITGB1-207, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-207ENST00000439974 MYOM3Q5VTT5 1437 aa25.21■■□□□ 1.63
ITGB1-207ENST00000439974 MIA2Q96PC5 1412 aa25.21■■□□□ 1.63
ITGB1-207ENST00000439974 MAST1Q9Y2H9 1570 aa25.2■■□□□ 1.62
ITGB1-207ENST00000439974 PLA2R1Q13018 1463 aa25.19■■□□□ 1.62
ITGB1-207ENST00000439974 NCKAP5LQ9HCH0 1330 aa25.15■■□□□ 1.62
ITGB1-207ENST00000439974 WASHC2CQ9Y4E1 1318 aa25.15■■□□□ 1.62
ITGB1-207ENST00000439974 PZPP20742 1482 aa25.15■■□□□ 1.62
ITGB1-207ENST00000439974 APLP2Q06481 763 aa25.14■■□□□ 1.62
ITGB1-207ENST00000439974 LTBP4Q8N2S1 1624 aa25.14■■□□□ 1.61
ITGB1-207ENST00000439974 A2ML1A8K2U0 1454 aa25.14■■□□□ 1.61
ITGB1-207ENST00000439974 PKD2Q13563 968 aa25.13■■□□□ 1.61
ITGB1-207ENST00000439974 TNRQ92752 1358 aa25.13■■□□□ 1.61
ITGB1-207ENST00000439974 TCOF1Q13428 1488 aaKnown RBP25.13■■□□□ 1.61
ITGB1-207ENST00000439974 FBXO31Q5XUX0 539 aaPredicted RBP25.11■■□□□ 1.61
ITGB1-207ENST00000439974 RNF17Q9BXT8 1623 aaKnown RBP25.11■■□□□ 1.61
ITGB1-207ENST00000439974 DNMT1P26358 1616 aaKnown RBP25.1■■□□□ 1.61
ITGB1-207ENST00000439974 EIF2AK4Q9P2K8 1649 aaKnown RBP25.09■■□□□ 1.61
ITGB1-207ENST00000439974 IQSEC2Q5JU85 1478 aa25.07■■□□□ 1.6
ITGB1-207ENST00000439974 ZC3H13Q5T200 1668 aaKnown RBP25.06■■□□□ 1.6
ITGB1-207ENST00000439974 PTPN23Q9H3S7 1636 aa25.04■■□□□ 1.6
ITGB1-207ENST00000439974 ABCC3O15438 1527 aa25.04■■□□□ 1.6
ITGB1-207ENST00000439974 DUOX2Q9NRD8 1548 aa25.04■■□□□ 1.6
ITGB1-207ENST00000439974 SHANK2Q9UPX8 1470 aa25.03■■□□□ 1.6
ITGB1-207ENST00000439974 NLRP1Q9C000 1473 aa25.02■■□□□ 1.6
ITGB1-207ENST00000439974 CROCC2H7BZ55 1655 aa25.02■■□□□ 1.6
ITGB1-207ENST00000439974 ZNF335Q9H4Z2 1342 aaPredicted RBP25.02■■□□□ 1.6
ITGB1-207ENST00000439974 ABCC5O15440 1437 aa25.02■■□□□ 1.6
ITGB1-207ENST00000439974 MROH1Q8NDA8 1641 aa25.01■■□□□ 1.59
ITGB1-207ENST00000439974 FGD6Q6ZV73 1430 aa25■■□□□ 1.59
ITGB1-207ENST00000439974 POLR1AO95602 1720 aaPredicted RBP25■■□□□ 1.59
ITGB1-207ENST00000439974 KIF15Q9NS87 1388 aa24.99■■□□□ 1.59
ITGB1-207ENST00000439974 DAPK1P53355 1430 aa24.97■■□□□ 1.59
ITGB1-207ENST00000439974 SPATA31D1Q6ZQQ2 1576 aa24.97■■□□□ 1.59
ITGB1-207ENST00000439974 UGGT1Q9NYU2 1555 aa24.97■■□□□ 1.59
ITGB1-207ENST00000439974 ERBINQ96RT1 1412 aa24.96■■□□□ 1.59
ITGB1-207ENST00000439974 CEP152O94986 1710 aa24.96■■□□□ 1.59
ITGB1-207ENST00000439974 THEMISQ8N1K5 641 aaPredicted RBP24.96■■□□□ 1.59
ITGB1-207ENST00000439974 NEURL4Q96JN8 1562 aa24.96■■□□□ 1.59
ITGB1-207ENST00000439974 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.94■■□□□ 1.58
ITGB1-207ENST00000439974 ERVK-7P63135 1459 aa24.94■■□□□ 1.58
ITGB1-207ENST00000439974 RRP7BPQ9NSQ0 103 aa24.93■■□□□ 1.58
ITGB1-207ENST00000439974 PRDM15P57071 1507 aaPredicted RBP24.92■■□□□ 1.58
ITGB1-207ENST00000439974 ANKLE2Q86XL3 938 aa24.92■■□□□ 1.58
ITGB1-207ENST00000439974 PPARGC1BQ86YN6 1023 aaKnown RBP24.92■■□□□ 1.58
ITGB1-207ENST00000439974 CFAP65Q6ZU64 1925 aaKnown RBP24.88■■□□□ 1.57
ITGB1-207ENST00000439974 DEPDC5O75140 1603 aa24.88■■□□□ 1.57
ITGB1-207ENST00000439974 ANKRD30AQ9BXX3 1397 aa24.88■■□□□ 1.57
ITGB1-207ENST00000439974 ARHGAP31Q2M1Z3 1444 aa24.86■■□□□ 1.57
ITGB1-207ENST00000439974 MED14O60244 1454 aa24.86■■□□□ 1.57
ITGB1-207ENST00000439974 NPHP4O75161 1426 aaPredicted RBP24.86■■□□□ 1.57
ITGB1-207ENST00000439974 CHIC2Q9UKJ5 165 aa24.85■■□□□ 1.57
ITGB1-207ENST00000439974 UBAP1LF5GYI3 381 aa24.84■■□□□ 1.57
ITGB1-207ENST00000439974 CPS1P31327 1500 aa24.84■■□□□ 1.57
ITGB1-207ENST00000439974 KANK1Q14678 1352 aa24.83■■□□□ 1.57
ITGB1-207ENST00000439974 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.83■■□□□ 1.57
ITGB1-207ENST00000439974 IQGAP1P46940 1657 aa24.81■■□□□ 1.56
ITGB1-207ENST00000439974 UBR1Q8IWV7 1749 aa24.81■■□□□ 1.56
ITGB1-207ENST00000439974 ADGRL2O95490 1459 aa24.8■■□□□ 1.56
ITGB1-207ENST00000439974 VWDEQ8N2E2 1590 aa24.8■■□□□ 1.56
ITGB1-207ENST00000439974 LMTK2Q8IWU2 1503 aa24.78■■□□□ 1.56
ITGB1-207ENST00000439974 FAM50AQ14320 339 aaKnown RBP24.78■■□□□ 1.56
ITGB1-207ENST00000439974 DISP3Q9P2K9 1392 aa24.74■■□□□ 1.55
ITGB1-207ENST00000439974 SCAF11Q99590 1463 aaKnown RBP24.73■■□□□ 1.55
ITGB1-207ENST00000439974 SLIT1O75093 1534 aa24.72■■□□□ 1.55
ITGB1-207ENST00000439974 ARHGAP23Q9P227 1491 aa24.72■■□□□ 1.55
ITGB1-207ENST00000439974 PIK3C2BO00750 1634 aa24.71■■□□□ 1.55
ITGB1-207ENST00000439974 ANKRD50Q9ULJ7 1429 aa24.69■■□□□ 1.54
ITGB1-207ENST00000439974 TOM1O60784 492 aa24.69■■□□□ 1.54
ITGB1-207ENST00000439974 EFCAB6Q5THR3 1501 aa24.69■■□□□ 1.54
ITGB1-207ENST00000439974 TXNDC2Q86VQ3 553 aa24.68■■□□□ 1.54
ITGB1-207ENST00000439974 LTKP29376 864 aa24.67■■□□□ 1.54
ITGB1-207ENST00000439974 STAG3Q9UJ98 1225 aa24.67■■□□□ 1.54
ITGB1-207ENST00000439974 KDM5AP29375 1690 aaKnown RBP24.66■■□□□ 1.54
ITGB1-207ENST00000439974 EID1Q9Y6B2 187 aa24.66■■□□□ 1.54
ITGB1-207ENST00000439974 STRCP1A6NGW2 1772 aa24.66■■□□□ 1.54
ITGB1-207ENST00000439974 SYNMO15061 1565 aa24.65■■□□□ 1.54
ITGB1-207ENST00000439974 NOS1P29475 1434 aa24.65■■□□□ 1.54
ITGB1-207ENST00000439974 TMEM2Q9UHN6 1383 aa24.65■■□□□ 1.54
ITGB1-207ENST00000439974 IDI1Q13907 227 aa24.64■■□□□ 1.54
ITGB1-207ENST00000439974 SCAF1Q9H7N4 1312 aaKnown RBP24.63■■□□□ 1.53
ITGB1-207ENST00000439974 PIP4K2BP78356 416 aa24.63■■□□□ 1.53
ITGB1-207ENST00000439974 LRRC7Q96NW7 1537 aa24.62■■□□□ 1.53
ITGB1-207ENST00000439974 RPRD2Q5VT52 1461 aaKnown RBP24.61■■□□□ 1.53
ITGB1-207ENST00000439974 ROCK1Q13464 1354 aa24.58■■□□□ 1.53
ITGB1-207ENST00000439974 ADGRB3O60242 1522 aa24.58■■□□□ 1.53
ITGB1-207ENST00000439974 SLC52A1Q9NWF4 448 aa24.58■■□□□ 1.53
ITGB1-207ENST00000439974 TET3O43151 1660 aa24.58■■□□□ 1.53
ITGB1-207ENST00000439974 UNC13BO14795 1591 aa24.57■■□□□ 1.52
ITGB1-207ENST00000439974 ALKQ9UM73 1620 aa24.57■■□□□ 1.52
ITGB1-207ENST00000439974 HSPA1LP34931 641 aa24.56■■□□□ 1.52
ITGB1-207ENST00000439974 ILDR2Q71H61 639 aa24.56■■□□□ 1.52
ITGB1-207ENST00000439974 GCC2Q8IWJ2 1684 aa24.53■■□□□ 1.52
ITGB1-207ENST00000439974 ITGAEP38570 1179 aa24.48■■□□□ 1.51
ITGB1-207ENST00000439974 XIRP1Q702N8 1843 aaKnown RBP24.47■■□□□ 1.51
ITGB1-207ENST00000439974 IQGAP3Q86VI3 1631 aa24.46■■□□□ 1.51
ITGB1-207ENST00000439974 E9PCH4 1651 aa24.46■■□□□ 1.51
ITGB1-207ENST00000439974 MYO5BQ9ULV0 1848 aa24.45■■□□□ 1.5
ITGB1-207ENST00000439974 SLC26A8Q96RN1 970 aa24.45■■□□□ 1.5
ITGB1-207ENST00000439974 KCNA6P17658 529 aa24.44■■□□□ 1.5
ITGB1-207ENST00000439974 ZFYVE9O95405 1425 aa24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms