RNA–Protein interactions for RNA: ENST00000439514.1

HLA-W-207, Transcript of major histocompatibility complex, class I, W (pseudogene), humanhuman

BASIC

Gene HLA-W, Length 771 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-W-207ENST00000439514 ERBINQ96RT1 1412 aa20.19■□□□□ 0.82
HLA-W-207ENST00000439514 CEBPAP49715 358 aaPredicted RBP20.18■□□□□ 0.82
HLA-W-207ENST00000439514 FAM50AQ14320 339 aaKnown RBP20.18■□□□□ 0.82
HLA-W-207ENST00000439514 KDM5DQ9BY66 1539 aa20.17■□□□□ 0.82
HLA-W-207ENST00000439514 CLTCQ00610 1675 aaKnown RBP20.16■□□□□ 0.82
HLA-W-207ENST00000439514 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.16■□□□□ 0.82
HLA-W-207ENST00000439514 RNF17Q9BXT8 1623 aaKnown RBP20.16■□□□□ 0.82
HLA-W-207ENST00000439514 WASHC2CQ9Y4E1 1318 aa20.14■□□□□ 0.81
HLA-W-207ENST00000439514 ADGRL2O95490 1459 aa20.13■□□□□ 0.81
HLA-W-207ENST00000439514 ZC3H13Q5T200 1668 aaKnown RBP20.13■□□□□ 0.81
HLA-W-207ENST00000439514 NCOA1Q15788 1441 aa20.11■□□□□ 0.81
HLA-W-207ENST00000439514 RRP7BPQ9NSQ0 103 aa20.1■□□□□ 0.81
HLA-W-207ENST00000439514 PZPP20742 1482 aa20.09■□□□□ 0.81
HLA-W-207ENST00000439514 PTPRKQ15262 1439 aa20.09■□□□□ 0.81
HLA-W-207ENST00000439514 KANK1Q14678 1352 aa20.08■□□□□ 0.8
HLA-W-207ENST00000439514 CHIC2Q9UKJ5 165 aa20.07■□□□□ 0.8
HLA-W-207ENST00000439514 ROCK1Q13464 1354 aa20.07■□□□□ 0.8
HLA-W-207ENST00000439514 PRDM15P57071 1507 aaPredicted RBP20.06■□□□□ 0.8
HLA-W-207ENST00000439514 ABCC3O15438 1527 aa20.05■□□□□ 0.8
HLA-W-207ENST00000439514 HSPA2P54652 639 aa20.04■□□□□ 0.8
HLA-W-207ENST00000439514 DMRT2Q9Y5R5 561 aa20.04■□□□□ 0.8
HLA-W-207ENST00000439514 DEPDC5O75140 1603 aa20.03■□□□□ 0.8
HLA-W-207ENST00000439514 RRBP1Q9P2E9 1410 aaKnown RBP20.02■□□□□ 0.8
HLA-W-207ENST00000439514 MROH1Q8NDA8 1641 aa20.02■□□□□ 0.8
HLA-W-207ENST00000439514 ANKRD50Q9ULJ7 1429 aa20.02■□□□□ 0.79
HLA-W-207ENST00000439514 ZNF142P52746 1687 aaPredicted RBP20.01■□□□□ 0.79
HLA-W-207ENST00000439514 TNRQ92752 1358 aa20.01■□□□□ 0.79
HLA-W-207ENST00000439514 MYO3AQ8NEV4 1616 aa20.01■□□□□ 0.79
HLA-W-207ENST00000439514 PPARGC1BQ86YN6 1023 aaKnown RBP20■□□□□ 0.79
HLA-W-207ENST00000439514 ARHGAP31Q2M1Z3 1444 aa19.99■□□□□ 0.79
HLA-W-207ENST00000439514 CEP170BQ9Y4F5 1589 aaPredicted RBP19.99■□□□□ 0.79
HLA-W-207ENST00000439514 NLRP1Q9C000 1473 aa19.99■□□□□ 0.79
HLA-W-207ENST00000439514 A2ML1A8K2U0 1454 aa19.98■□□□□ 0.79
HLA-W-207ENST00000439514 CAMSAP1Q5T5Y3 1602 aa19.98■□□□□ 0.79
HLA-W-207ENST00000439514 LMTK2Q8IWU2 1503 aa19.97■□□□□ 0.79
HLA-W-207ENST00000439514 PLA2R1Q13018 1463 aa19.96■□□□□ 0.79
HLA-W-207ENST00000439514 SPATA31D1Q6ZQQ2 1576 aa19.95■□□□□ 0.78
HLA-W-207ENST00000439514 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.95■□□□□ 0.78
HLA-W-207ENST00000439514 CEP152O94986 1710 aa19.95■□□□□ 0.78
HLA-W-207ENST00000439514 VWDEQ8N2E2 1590 aa19.94■□□□□ 0.78
HLA-W-207ENST00000439514 ERVK-7P63135 1459 aa19.93■□□□□ 0.78
HLA-W-207ENST00000439514 PKD2Q13563 968 aa19.93■□□□□ 0.78
HLA-W-207ENST00000439514 FBXO31Q5XUX0 539 aaPredicted RBP19.93■□□□□ 0.78
HLA-W-207ENST00000439514 PTPRTO14522 1441 aa19.93■□□□□ 0.78
HLA-W-207ENST00000439514 ITGAEP38570 1179 aa19.91■□□□□ 0.78
HLA-W-207ENST00000439514 THEMISQ8N1K5 641 aaPredicted RBP19.9■□□□□ 0.78
HLA-W-207ENST00000439514 UNC13BO14795 1591 aa19.89■□□□□ 0.77
HLA-W-207ENST00000439514 RPRD2Q5VT52 1461 aaKnown RBP19.89■□□□□ 0.77
HLA-W-207ENST00000439514 STRCQ7RTU9 1775 aa19.89■□□□□ 0.77
HLA-W-207ENST00000439514 EFCAB6Q5THR3 1501 aa19.87■□□□□ 0.77
HLA-W-207ENST00000439514 UGGT1Q9NYU2 1555 aa19.87■□□□□ 0.77
HLA-W-207ENST00000439514 TET3O43151 1660 aa19.84■□□□□ 0.77
HLA-W-207ENST00000439514 GCC2Q8IWJ2 1684 aa19.81■□□□□ 0.76
HLA-W-207ENST00000439514 ANKLE2Q86XL3 938 aa19.81■□□□□ 0.76
HLA-W-207ENST00000439514 IQGAP3Q86VI3 1631 aa19.8■□□□□ 0.76
HLA-W-207ENST00000439514 NOS1P29475 1434 aa19.8■□□□□ 0.76
HLA-W-207ENST00000439514 SLC52A1Q9NWF4 448 aa19.8■□□□□ 0.76
HLA-W-207ENST00000439514 NUP155O75694 1391 aa19.8■□□□□ 0.76
HLA-W-207ENST00000439514 HFM1A2PYH4 1435 aa19.79■□□□□ 0.76
HLA-W-207ENST00000439514 ACIN1Q9UKV3 1341 aaKnown RBP19.78■□□□□ 0.76
HLA-W-207ENST00000439514 CFAP65Q6ZU64 1925 aaKnown RBP19.78■□□□□ 0.76
HLA-W-207ENST00000439514 KDM5AP29375 1690 aaKnown RBP19.78■□□□□ 0.76
HLA-W-207ENST00000439514 POLR1AO95602 1720 aaPredicted RBP19.78■□□□□ 0.76
HLA-W-207ENST00000439514 NCKAP5LQ9HCH0 1330 aa19.77■□□□□ 0.76
HLA-W-207ENST00000439514 NAIPQ13075 1403 aa19.77■□□□□ 0.76
HLA-W-207ENST00000439514 STAG3Q9UJ98 1225 aa19.76■□□□□ 0.75
HLA-W-207ENST00000439514 UBR1Q8IWV7 1749 aa19.75■□□□□ 0.75
HLA-W-207ENST00000439514 MED14O60244 1454 aa19.73■□□□□ 0.75
HLA-W-207ENST00000439514 SLIT1O75093 1534 aa19.72■□□□□ 0.75
HLA-W-207ENST00000439514 SYNMO15061 1565 aa19.72■□□□□ 0.75
HLA-W-207ENST00000439514 EID1Q9Y6B2 187 aa19.72■□□□□ 0.75
HLA-W-207ENST00000439514 IDI1Q13907 227 aa19.71■□□□□ 0.75
HLA-W-207ENST00000439514 CERKQ8TCT0 537 aa19.71■□□□□ 0.75
HLA-W-207ENST00000439514 PIK3C2BO00750 1634 aa19.71■□□□□ 0.75
HLA-W-207ENST00000439514 ARHGAP23Q9P227 1491 aa19.71■□□□□ 0.75
HLA-W-207ENST00000439514 NPHP4O75161 1426 aaPredicted RBP19.7■□□□□ 0.74
HLA-W-207ENST00000439514 FBXO41Q8TF61 875 aa19.7■□□□□ 0.74
HLA-W-207ENST00000439514 SCAF11Q99590 1463 aaKnown RBP19.7■□□□□ 0.74
HLA-W-207ENST00000439514 ADGRB3O60242 1522 aa19.7■□□□□ 0.74
HLA-W-207ENST00000439514 NEURL4Q96JN8 1562 aa19.7■□□□□ 0.74
HLA-W-207ENST00000439514 E9PCH4 1651 aa19.69■□□□□ 0.74
HLA-W-207ENST00000439514 IQSEC2Q5JU85 1478 aa19.69■□□□□ 0.74
HLA-W-207ENST00000439514 TMEM2Q9UHN6 1383 aa19.69■□□□□ 0.74
HLA-W-207ENST00000439514 HDGFP51858 240 aaKnown RBP19.68■□□□□ 0.74
HLA-W-207ENST00000439514 IQGAP1P46940 1657 aa19.66■□□□□ 0.74
HLA-W-207ENST00000439514 TXNDC2Q86VQ3 553 aa19.66■□□□□ 0.74
HLA-W-207ENST00000439514 LTBP4Q8N2S1 1624 aa19.65■□□□□ 0.74
HLA-W-207ENST00000439514 TRIM52Q96A61 297 aa19.64■□□□□ 0.73
HLA-W-207ENST00000439514 ILDR1Q86SU0 546 aaPredicted RBP19.63■□□□□ 0.73
HLA-W-207ENST00000439514 CPS1P31327 1500 aa19.62■□□□□ 0.73
HLA-W-207ENST00000439514 ZNF335Q9H4Z2 1342 aaPredicted RBP19.61■□□□□ 0.73
HLA-W-207ENST00000439514 SPHKAPQ2M3C7 1700 aa19.6■□□□□ 0.73
HLA-W-207ENST00000439514 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.6■□□□□ 0.73
HLA-W-207ENST00000439514 TMEM131LA2VDJ0 1609 aa19.58■□□□□ 0.73
HLA-W-207ENST00000439514 LTKP29376 864 aa19.58■□□□□ 0.72
HLA-W-207ENST00000439514 SLC4A1APQ9BWU0 796 aaKnown RBP19.58■□□□□ 0.72
HLA-W-207ENST00000439514 SETD5Q9C0A6 1442 aa19.57■□□□□ 0.72
HLA-W-207ENST00000439514 TRPM2O94759 1503 aa19.56■□□□□ 0.72
HLA-W-207ENST00000439514 CHGAP10645 457 aaKnown RBP19.56■□□□□ 0.72
HLA-W-207ENST00000439514 PPP1R15AO75807 674 aaPredicted RBP19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms