RNA–Protein interactions for RNA: ENST00000438819.1

CLIP4-206, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 4

Gene CLIP4, Length 562 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-206ENST00000438819 ZNF316A6NFI3 1004 aaPredicted RBP10.11□□□□□ -0.79
CLIP4-206ENST00000438819 RIMBP2O15034 1052 aa10.11□□□□□ -0.79
CLIP4-206ENST00000438819 PTGDRQ13258 359 aa10.11□□□□□ -0.79
CLIP4-206ENST00000438819 DDRGK1Q96HY6 314 aa10.11□□□□□ -0.79
CLIP4-206ENST00000438819 ANO8Q9HCE9 1232 aaPredicted RBP10.11□□□□□ -0.79
CLIP4-206ENST00000438819 MARVELD3Q96A59 401 aa10.09□□□□□ -0.79
CLIP4-206ENST00000438819 SLC34A2O95436 690 aa10.08□□□□□ -0.8
CLIP4-206ENST00000438819 EMP3P54852 163 aa10.07□□□□□ -0.8
CLIP4-206ENST00000438819 HOMEZQ8IX15 550 aa10.07□□□□□ -0.8
CLIP4-206ENST00000438819 HOXB1P14653 301 aaPredicted RBP10.05□□□□□ -0.8
CLIP4-206ENST00000438819 TTLL12Q14166 644 aaPredicted RBP10.05□□□□□ -0.8
CLIP4-206ENST00000438819 ZMYND15Q9H091 742 aa10.05□□□□□ -0.8
CLIP4-206ENST00000438819 ZSWIM6Q9HCJ5 1215 aa10.05□□□□□ -0.8
CLIP4-206ENST00000438819 PHF14O94880 888 aa10.04□□□□□ -0.8
CLIP4-206ENST00000438819 EPAS1Q99814 870 aa10.04□□□□□ -0.8
CLIP4-206ENST00000438819 EN1Q05925 392 aaPredicted RBP10.03□□□□□ -0.8
CLIP4-206ENST00000438819 CDAN1Q8IWY9 1227 aa10.03□□□□□ -0.8
CLIP4-206ENST00000438819 NPDC1Q9NQX5 325 aaPredicted RBP10.03□□□□□ -0.8
CLIP4-206ENST00000438819 CDHR5Q9HBB8 845 aa10.02□□□□□ -0.81
CLIP4-206ENST00000438819 GIGYF2Q6Y7W6 1299 aaKnown RBP10.01□□□□□ -0.81
CLIP4-206ENST00000438819 MAP3K7O43318 606 aa10□□□□□ -0.81
CLIP4-206ENST00000438819 GOPCQ9HD26 462 aa10□□□□□ -0.81
CLIP4-206ENST00000438819 PCDHGA10Q9Y5H3 936 aa10□□□□□ -0.81
CLIP4-206ENST00000438819 FAM205CA6NFA0 338 aa9.99□□□□□ -0.81
CLIP4-206ENST00000438819 MS4A1P11836 297 aa9.99□□□□□ -0.81
CLIP4-206ENST00000438819 RBM33Q96EV2 1170 aaKnown RBP9.99□□□□□ -0.81
CLIP4-206ENST00000438819 REPIN1Q9BWE0 567 aaKnown RBP9.99□□□□□ -0.81
CLIP4-206ENST00000438819 GPR153Q6NV75 609 aa9.98□□□□□ -0.81
CLIP4-206ENST00000438819 PCDHGA4Q9Y5G9 962 aa9.98□□□□□ -0.81
CLIP4-206ENST00000438819 TYW1BQ6NUM6 668 aa9.97□□□□□ -0.81
CLIP4-206ENST00000438819 HS3ST6Q96QI5 342 aa9.97□□□□□ -0.81
CLIP4-206ENST00000438819 TMUB1Q9BVT8 246 aa9.97□□□□□ -0.81
CLIP4-206ENST00000438819 RSPH6AQ9H0K4 717 aa9.97□□□□□ -0.81
CLIP4-206ENST00000438819 TSR1Q2NL82 804 aaKnown RBP9.96□□□□□ -0.82
CLIP4-206ENST00000438819 ARSIQ5FYB1 569 aa9.96□□□□□ -0.82
CLIP4-206ENST00000438819 PLSCR2Q9NRY7 297 aa9.96□□□□□ -0.82
CLIP4-206ENST00000438819 ERBB3P21860 1342 aa9.96□□□□□ -0.82
CLIP4-206ENST00000438819 KDM4FA0A1W2PPD8 638 aa9.94□□□□□ -0.82
CLIP4-206ENST00000438819 CLCN1P35523 988 aa9.94□□□□□ -0.82
CLIP4-206ENST00000438819 FBXW7Q969H0 707 aa9.94□□□□□ -0.82
CLIP4-206ENST00000438819 FLIIQ13045 1269 aa9.93□□□□□ -0.82
CLIP4-206ENST00000438819 PHOX2BQ99453 314 aa9.93□□□□□ -0.82
CLIP4-206ENST00000438819 MDM2Q00987 491 aaPredicted RBP9.92□□□□□ -0.82
CLIP4-206ENST00000438819 JPH4Q96JJ6 628 aa9.92□□□□□ -0.82
CLIP4-206ENST00000438819 PCMTD1Q96MG8 357 aaPredicted RBP9.92□□□□□ -0.82
CLIP4-206ENST00000438819 GPCPD1Q9NPB8 672 aa9.92□□□□□ -0.82
CLIP4-206ENST00000438819 POTEB3A0JP26 581 aa9.91□□□□□ -0.82
CLIP4-206ENST00000438819 POTEBQ6S5H4 581 aa9.91□□□□□ -0.82
CLIP4-206ENST00000438819 SSTR3P32745 418 aaPredicted RBP9.9□□□□□ -0.82
CLIP4-206ENST00000438819 FOSBP53539 338 aa9.9□□□□□ -0.82
CLIP4-206ENST00000438819 VARS2Q5ST30 1063 aaKnown RBP9.9□□□□□ -0.82
CLIP4-206ENST00000438819 KHSRPQ92945 711 aaKnown RBP eCLIP9.9□□□□□ -0.82
CLIP4-206ENST00000438819 SH3D19Q5HYK7 790 aa9.89□□□□□ -0.83
CLIP4-206ENST00000438819 ONECUT3O60422 494 aaPredicted RBP9.88□□□□□ -0.83
CLIP4-206ENST00000438819 OATP04181 439 aa9.88□□□□□ -0.83
CLIP4-206ENST00000438819 FAM161AQ3B820 660 aa9.88□□□□□ -0.83
CLIP4-206ENST00000438819 C6orf132Q5T0Z8 1188 aa9.88□□□□□ -0.83
CLIP4-206ENST00000438819 CERKQ8TCT0 537 aa9.88□□□□□ -0.83
CLIP4-206ENST00000438819 NUDT7P0C024 238 aa9.87□□□□□ -0.83
CLIP4-206ENST00000438819 METTL3Q86U44 580 aaKnown RBP9.87□□□□□ -0.83
CLIP4-206ENST00000438819 PADI6Q6TGC4 694 aa9.86□□□□□ -0.83
CLIP4-206ENST00000438819 ZDHHC16Q969W1 377 aa9.86□□□□□ -0.83
CLIP4-206ENST00000438819 SKIV2LQ15477 1246 aaKnown RBP9.85□□□□□ -0.83
CLIP4-206ENST00000438819 BEGAINQ9BUH8 593 aa9.85□□□□□ -0.83
CLIP4-206ENST00000438819 FAM217BQ9NTX9 383 aaPredicted RBP9.85□□□□□ -0.83
CLIP4-206ENST00000438819 ADGRG1Q9Y653 693 aa9.85□□□□□ -0.83
CLIP4-206ENST00000438819 ZNF454Q8N9F8 522 aa9.84□□□□□ -0.83
CLIP4-206ENST00000438819 TTC13Q8NBP0 860 aa9.84□□□□□ -0.83
CLIP4-206ENST00000438819 PXYLP1Q8TE99 480 aa9.84□□□□□ -0.83
CLIP4-206ENST00000438819 NLRP7Q8WX94 980 aa9.83□□□□□ -0.84
CLIP4-206ENST00000438819 RBM27Q9P2N5 1060 aaKnown RBP9.83□□□□□ -0.84
CLIP4-206ENST00000438819 ZNF687Q8N1G0 1237 aa9.82□□□□□ -0.84
CLIP4-206ENST00000438819 KRTAP3-3Q9BYR6 98 aa9.81□□□□□ -0.84
CLIP4-206ENST00000438819 KRTAP3-2Q9BYR7 98 aa9.81□□□□□ -0.84
CLIP4-206ENST00000438819 ADAM33Q9BZ11 813 aa9.81□□□□□ -0.84
CLIP4-206ENST00000438819 C1orf115Q9H7X2 142 aa9.81□□□□□ -0.84
CLIP4-206ENST00000438819 LHX6Q9UPM6 363 aa9.81□□□□□ -0.84
CLIP4-206ENST00000438819 UBTFP17480 764 aaKnown RBP9.8□□□□□ -0.84
CLIP4-206ENST00000438819 PROCA1Q8NCQ7 364 aaPredicted RBP9.8□□□□□ -0.84
CLIP4-206ENST00000438819 A6NJR5 290 aa9.79□□□□□ -0.84
CLIP4-206ENST00000438819 PRSS12P56730 875 aa9.79□□□□□ -0.84
CLIP4-206ENST00000438819 PSDA5PKW4 1024 aaPredicted RBP9.78□□□□□ -0.84
CLIP4-206ENST00000438819 CDCA7LQ96GN5 454 aa9.78□□□□□ -0.84
CLIP4-206ENST00000438819 POLR3EQ9NVU0 708 aa9.78□□□□□ -0.84
CLIP4-206ENST00000438819 ARID3CA6NKF2 412 aa9.77□□□□□ -0.85
CLIP4-206ENST00000438819 APBB1O00213 710 aa9.77□□□□□ -0.85
CLIP4-206ENST00000438819 MCM6Q14566 821 aa9.77□□□□□ -0.85
CLIP4-206ENST00000438819 RBM46Q8TBY0 533 aaKnown RBP9.77□□□□□ -0.85
CLIP4-206ENST00000438819 CLUAP1Q96AJ1 413 aa9.77□□□□□ -0.85
CLIP4-206ENST00000438819 ATP1B4Q9UN42 357 aaPredicted RBP9.77□□□□□ -0.85
CLIP4-206ENST00000438819 MYSM1Q5VVJ2 828 aa9.76□□□□□ -0.85
CLIP4-206ENST00000438819 SPNS2Q8IVW8 549 aa9.76□□□□□ -0.85
CLIP4-206ENST00000438819 ARID3AQ99856 593 aa9.76□□□□□ -0.85
CLIP4-206ENST00000438819 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.75□□□□□ -0.85
CLIP4-206ENST00000438819 TRAK2O60296 914 aa9.74□□□□□ -0.85
CLIP4-206ENST00000438819 TBC1D2Q9BYX2 928 aa9.73□□□□□ -0.85
CLIP4-206ENST00000438819 FAM198AQ9UFP1 575 aa9.73□□□□□ -0.85
CLIP4-206ENST00000438819 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.72□□□□□ -0.85
CLIP4-206ENST00000438819 PBX2P40425 430 aa9.72□□□□□ -0.85
CLIP4-206ENST00000438819 CLK2P49760 499 aaKnown RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms