RNA–Protein interactions for RNA: ENST00000438014.5

R3HDM1-208, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-208ENST00000438014 AGLP35573 1532 aa13.82□□□□□ -0.2
R3HDM1-208ENST00000438014 RGL2O15211 777 aa13.82□□□□□ -0.2
R3HDM1-208ENST00000438014 HSPA1LP34931 641 aa13.82□□□□□ -0.2
R3HDM1-208ENST00000438014 REREQ9P2R6 1566 aa13.82□□□□□ -0.2
R3HDM1-208ENST00000438014 NPATQ14207 1427 aa13.81□□□□□ -0.2
R3HDM1-208ENST00000438014 MLH3Q9UHC1 1453 aa13.81□□□□□ -0.2
R3HDM1-208ENST00000438014 CDK13Q14004 1512 aaKnown RBP13.81□□□□□ -0.2
R3HDM1-208ENST00000438014 VSIG10Q8N0Z9 540 aa13.81□□□□□ -0.2
R3HDM1-208ENST00000438014 CAMSAP1Q5T5Y3 1602 aa13.81□□□□□ -0.2
R3HDM1-208ENST00000438014 C3P01024 1663 aa13.81□□□□□ -0.2
R3HDM1-208ENST00000438014 KDM5CP41229 1560 aa13.8□□□□□ -0.2
R3HDM1-208ENST00000438014 PIP4K2BP78356 416 aa13.8□□□□□ -0.2
R3HDM1-208ENST00000438014 CIZ1Q9ULV3 898 aaPredicted RBP13.8□□□□□ -0.2
R3HDM1-208ENST00000438014 ZMYM3Q14202 1370 aa13.8□□□□□ -0.2
R3HDM1-208ENST00000438014 ARHGAP5Q13017 1502 aa13.79□□□□□ -0.2
R3HDM1-208ENST00000438014 DIP2CQ9Y2E4 1556 aa13.79□□□□□ -0.2
R3HDM1-208ENST00000438014 MYO5CQ9NQX4 1742 aa13.76□□□□□ -0.21
R3HDM1-208ENST00000438014 PLA2R1Q13018 1463 aa13.76□□□□□ -0.21
R3HDM1-208ENST00000438014 CLIP1P30622 1438 aa13.76□□□□□ -0.21
R3HDM1-208ENST00000438014 MED1Q15648 1581 aaPredicted RBP13.75□□□□□ -0.21
R3HDM1-208ENST00000438014 TROQ12816 1431 aaPredicted RBP13.75□□□□□ -0.21
R3HDM1-208ENST00000438014 EEA1Q15075 1411 aa13.75□□□□□ -0.21
R3HDM1-208ENST00000438014 PAXIP1Q6ZW49 1069 aaPredicted RBP13.75□□□□□ -0.21
R3HDM1-208ENST00000438014 FMN1Q68DA7 1419 aa13.74□□□□□ -0.21
R3HDM1-208ENST00000438014 CFAP44Q96MT7 982 aa13.72□□□□□ -0.21
R3HDM1-208ENST00000438014 TCOF1Q13428 1488 aaKnown RBP13.72□□□□□ -0.21
R3HDM1-208ENST00000438014 KIF14Q15058 1648 aa13.72□□□□□ -0.21
R3HDM1-208ENST00000438014 ABCA6Q8N139 1617 aa13.72□□□□□ -0.21
R3HDM1-208ENST00000438014 BCANQ96GW7 911 aa13.7□□□□□ -0.22
R3HDM1-208ENST00000438014 SPAG9O60271 1321 aaKnown RBP13.68□□□□□ -0.22
R3HDM1-208ENST00000438014 PTPRKQ15262 1439 aa13.68□□□□□ -0.22
R3HDM1-208ENST00000438014 CPS1P31327 1500 aa13.68□□□□□ -0.22
R3HDM1-208ENST00000438014 MROH2AA6NES4 1674 aa13.67□□□□□ -0.22
R3HDM1-208ENST00000438014 UBTFP17480 764 aaKnown RBP13.67□□□□□ -0.22
R3HDM1-208ENST00000438014 GGT6Q6P531 493 aa13.67□□□□□ -0.22
R3HDM1-208ENST00000438014 ZNF777Q9ULD5 760 aaPredicted RBP13.66□□□□□ -0.22
R3HDM1-208ENST00000438014 ABCC1P33527 1531 aa13.65□□□□□ -0.22
R3HDM1-208ENST00000438014 CHGAP10645 457 aaKnown RBP13.65□□□□□ -0.22
R3HDM1-208ENST00000438014 SPRYD3Q8NCJ5 442 aa13.65□□□□□ -0.22
R3HDM1-208ENST00000438014 SHANK2Q9UPX8 1470 aa13.65□□□□□ -0.22
R3HDM1-208ENST00000438014 CEP170BQ9Y4F5 1589 aaPredicted RBP13.65□□□□□ -0.22
R3HDM1-208ENST00000438014 ANKLE2Q86XL3 938 aa13.64□□□□□ -0.23
R3HDM1-208ENST00000438014 KIDINS220Q9ULH0 1771 aa13.63□□□□□ -0.23
R3HDM1-208ENST00000438014 A2ML1A8K2U0 1454 aa13.63□□□□□ -0.23
R3HDM1-208ENST00000438014 HNRNPMP52272 730 aaKnown RBP eCLIP13.62□□□□□ -0.23
R3HDM1-208ENST00000438014 GSE1Q14687 1217 aa13.62□□□□□ -0.23
R3HDM1-208ENST00000438014 SPDYE1Q8NFV5 336 aaPredicted RBP13.62□□□□□ -0.23
R3HDM1-208ENST00000438014 ZNF142P52746 1687 aaPredicted RBP13.62□□□□□ -0.23
R3HDM1-208ENST00000438014 CDC42BPBQ9Y5S2 1711 aa13.61□□□□□ -0.23
R3HDM1-208ENST00000438014 MYO3AQ8NEV4 1616 aa13.61□□□□□ -0.23
R3HDM1-208ENST00000438014 THEMISQ8N1K5 641 aaPredicted RBP13.61□□□□□ -0.23
R3HDM1-208ENST00000438014 RBM42Q9BTD8 480 aaKnown RBP13.61□□□□□ -0.23
R3HDM1-208ENST00000438014 KDM2AQ9Y2K7 1162 aa13.6□□□□□ -0.23
R3HDM1-208ENST00000438014 A2MP01023 1474 aa13.6□□□□□ -0.23
R3HDM1-208ENST00000438014 ITSN2Q9NZM3 1697 aa13.59□□□□□ -0.23
R3HDM1-208ENST00000438014 SAMD9LQ8IVG5 1584 aa13.59□□□□□ -0.23
R3HDM1-208ENST00000438014 SUPT6HQ7KZ85 1726 aaKnown RBP13.59□□□□□ -0.23
R3HDM1-208ENST00000438014 PREX2Q70Z35 1606 aa13.58□□□□□ -0.24
R3HDM1-208ENST00000438014 AKT1S1Q96B36 256 aa13.58□□□□□ -0.24
R3HDM1-208ENST00000438014 ARHGAP35Q9NRY4 1499 aa13.58□□□□□ -0.24
R3HDM1-208ENST00000438014 CLTCQ00610 1675 aaKnown RBP13.57□□□□□ -0.24
R3HDM1-208ENST00000438014 RGS17Q9UGC6 210 aaPredicted RBP13.57□□□□□ -0.24
R3HDM1-208ENST00000438014 TNRQ92752 1358 aa13.57□□□□□ -0.24
R3HDM1-208ENST00000438014 KIAA1107Q9UPP5 1409 aa13.56□□□□□ -0.24
R3HDM1-208ENST00000438014 DNMT1P26358 1616 aaKnown RBP13.56□□□□□ -0.24
R3HDM1-208ENST00000438014 NUBP1P53384 320 aa13.55□□□□□ -0.24
R3HDM1-208ENST00000438014 CFDP1Q9UEE9 299 aaPredicted RBP13.55□□□□□ -0.24
R3HDM1-208ENST00000438014 CCDC18Q5T9S5 1454 aa13.55□□□□□ -0.24
R3HDM1-208ENST00000438014 PLEKHH2Q8IVE3 1493 aa13.55□□□□□ -0.24
R3HDM1-208ENST00000438014 FBXO31Q5XUX0 539 aaPredicted RBP13.54□□□□□ -0.24
R3HDM1-208ENST00000438014 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.54□□□□□ -0.24
R3HDM1-208ENST00000438014 ATP7AQ04656 1500 aa13.54□□□□□ -0.24
R3HDM1-208ENST00000438014 HS6ST3Q8IZP7 471 aa13.53□□□□□ -0.24
R3HDM1-208ENST00000438014 CLEC11AQ9Y240 323 aa13.53□□□□□ -0.24
R3HDM1-208ENST00000438014 NPHP4O75161 1426 aaPredicted RBP13.53□□□□□ -0.24
R3HDM1-208ENST00000438014 DCAF8Q5TAQ9 597 aa13.52□□□□□ -0.25
R3HDM1-208ENST00000438014 SYCP2Q9BX26 1530 aa13.52□□□□□ -0.25
R3HDM1-208ENST00000438014 PLXNC1O60486 1568 aa13.52□□□□□ -0.25
R3HDM1-208ENST00000438014 VWDEQ8N2E2 1590 aa13.51□□□□□ -0.25
R3HDM1-208ENST00000438014 GPATCH8Q9UKJ3 1502 aaKnown RBP13.51□□□□□ -0.25
R3HDM1-208ENST00000438014 CASKIN1Q8WXD9 1431 aa13.51□□□□□ -0.25
R3HDM1-208ENST00000438014 PRR29P0C7W0 189 aa13.51□□□□□ -0.25
R3HDM1-208ENST00000438014 TSHZ2Q9NRE2 1034 aa13.51□□□□□ -0.25
R3HDM1-208ENST00000438014 NEURL4Q96JN8 1562 aa13.5□□□□□ -0.25
R3HDM1-208ENST00000438014 MED14O60244 1454 aa13.5□□□□□ -0.25
R3HDM1-208ENST00000438014 WASHC2CQ9Y4E1 1318 aa13.5□□□□□ -0.25
R3HDM1-208ENST00000438014 ALKQ9UM73 1620 aa13.5□□□□□ -0.25
R3HDM1-208ENST00000438014 FAM135AQ9P2D6 1515 aa13.49□□□□□ -0.25
R3HDM1-208ENST00000438014 MIA2Q96PC5 1412 aa13.49□□□□□ -0.25
R3HDM1-208ENST00000438014 DHX29Q7Z478 1369 aaKnown RBP13.49□□□□□ -0.25
R3HDM1-208ENST00000438014 KIF3BO15066 747 aa13.49□□□□□ -0.25
R3HDM1-208ENST00000438014 POTEAQ6S8J7 498 aa13.49□□□□□ -0.25
R3HDM1-208ENST00000438014 RNF25Q96BH1 459 aaPredicted RBP13.49□□□□□ -0.25
R3HDM1-208ENST00000438014 CCNB3Q8WWL7 1395 aa13.48□□□□□ -0.25
R3HDM1-208ENST00000438014 LRRC7Q96NW7 1537 aa13.48□□□□□ -0.25
R3HDM1-208ENST00000438014 NLRP1Q9C000 1473 aa13.48□□□□□ -0.25
R3HDM1-208ENST00000438014 POLR1AO95602 1720 aaPredicted RBP13.47□□□□□ -0.25
R3HDM1-208ENST00000438014 CDC42BPAQ5VT25 1732 aa13.47□□□□□ -0.25
R3HDM1-208ENST00000438014 CREBZFQ9NS37 354 aa13.47□□□□□ -0.25
R3HDM1-208ENST00000438014 TAOK2Q9UL54 1235 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms