RNA–Protein interactions for RNA: ENST00000436769.5

COL6A2-206, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 2

Gene COL6A2, Length 919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-206ENST00000436769 PLA2R1Q13018 1463 aa31.99■■■□□ 2.71
COL6A2-206ENST00000436769 FAM135AQ9P2D6 1515 aa31.97■■■□□ 2.71
COL6A2-206ENST00000436769 KDM5DQ9BY66 1539 aa31.96■■■□□ 2.71
COL6A2-206ENST00000436769 FBXO31Q5XUX0 539 aaPredicted RBP31.96■■■□□ 2.71
COL6A2-206ENST00000436769 MIA2Q96PC5 1412 aa31.96■■■□□ 2.71
COL6A2-206ENST00000436769 MAST1Q9Y2H9 1570 aa31.96■■■□□ 2.71
COL6A2-206ENST00000436769 TCOF1Q13428 1488 aaKnown RBP31.96■■■□□ 2.71
COL6A2-206ENST00000436769 MYOM3Q5VTT5 1437 aa31.95■■■□□ 2.71
COL6A2-206ENST00000436769 WASHC2CQ9Y4E1 1318 aa31.95■■■□□ 2.7
COL6A2-206ENST00000436769 PKD2Q13563 968 aa31.94■■■□□ 2.7
COL6A2-206ENST00000436769 A2ML1A8K2U0 1454 aa31.93■■■□□ 2.7
COL6A2-206ENST00000436769 PZPP20742 1482 aa31.93■■■□□ 2.7
COL6A2-206ENST00000436769 DNMT1P26358 1616 aaKnown RBP31.92■■■□□ 2.7
COL6A2-206ENST00000436769 TNRQ92752 1358 aa31.89■■■□□ 2.7
COL6A2-206ENST00000436769 RNF17Q9BXT8 1623 aaKnown RBP31.86■■■□□ 2.69
COL6A2-206ENST00000436769 IQSEC2Q5JU85 1478 aa31.86■■■□□ 2.69
COL6A2-206ENST00000436769 ZNF335Q9H4Z2 1342 aaPredicted RBP31.85■■■□□ 2.69
COL6A2-206ENST00000436769 EIF2AK4Q9P2K8 1649 aaKnown RBP31.81■■■□□ 2.68
COL6A2-206ENST00000436769 ABCC3O15438 1527 aa31.79■■■□□ 2.68
COL6A2-206ENST00000436769 MROH1Q8NDA8 1641 aa31.78■■■□□ 2.68
COL6A2-206ENST00000436769 APLP2Q06481 763 aa31.76■■■□□ 2.67
COL6A2-206ENST00000436769 ABCC5O15440 1437 aa31.75■■■□□ 2.67
COL6A2-206ENST00000436769 NLRP1Q9C000 1473 aa31.75■■■□□ 2.67
COL6A2-206ENST00000436769 ZC3H13Q5T200 1668 aaKnown RBP31.75■■■□□ 2.67
COL6A2-206ENST00000436769 POLR1AO95602 1720 aaPredicted RBP31.75■■■□□ 2.67
COL6A2-206ENST00000436769 DUOX2Q9NRD8 1548 aa31.75■■■□□ 2.67
COL6A2-206ENST00000436769 NEURL4Q96JN8 1562 aa31.74■■■□□ 2.67
COL6A2-206ENST00000436769 PTPN23Q9H3S7 1636 aa31.74■■■□□ 2.67
COL6A2-206ENST00000436769 SHANK2Q9UPX8 1470 aa31.72■■■□□ 2.67
COL6A2-206ENST00000436769 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.71■■■□□ 2.67
COL6A2-206ENST00000436769 CROCC2H7BZ55 1655 aa31.71■■■□□ 2.67
COL6A2-206ENST00000436769 THEMISQ8N1K5 641 aaPredicted RBP31.71■■■□□ 2.67
COL6A2-206ENST00000436769 SPATA31D1Q6ZQQ2 1576 aa31.7■■■□□ 2.67
COL6A2-206ENST00000436769 UGGT1Q9NYU2 1555 aa31.69■■■□□ 2.66
COL6A2-206ENST00000436769 KIF15Q9NS87 1388 aa31.68■■■□□ 2.66
COL6A2-206ENST00000436769 FGD6Q6ZV73 1430 aa31.67■■■□□ 2.66
COL6A2-206ENST00000436769 CFAP65Q6ZU64 1925 aaKnown RBP31.67■■■□□ 2.66
COL6A2-206ENST00000436769 CEP152O94986 1710 aa31.67■■■□□ 2.66
COL6A2-206ENST00000436769 ANKLE2Q86XL3 938 aa31.67■■■□□ 2.66
COL6A2-206ENST00000436769 RRP7BPQ9NSQ0 103 aa31.66■■■□□ 2.66
COL6A2-206ENST00000436769 DAPK1P53355 1430 aa31.66■■■□□ 2.66
COL6A2-206ENST00000436769 ERVK-7P63135 1459 aa31.65■■■□□ 2.66
COL6A2-206ENST00000436769 ERBINQ96RT1 1412 aa31.63■■■□□ 2.65
COL6A2-206ENST00000436769 MED14O60244 1454 aa31.62■■■□□ 2.65
COL6A2-206ENST00000436769 DEPDC5O75140 1603 aa31.6■■■□□ 2.65
COL6A2-206ENST00000436769 PRDM15P57071 1507 aaPredicted RBP31.6■■■□□ 2.65
COL6A2-206ENST00000436769 UBAP1LF5GYI3 381 aa31.59■■■□□ 2.65
COL6A2-206ENST00000436769 ARHGAP31Q2M1Z3 1444 aa31.58■■■□□ 2.65
COL6A2-206ENST00000436769 NPHP4O75161 1426 aaPredicted RBP31.57■■■□□ 2.64
COL6A2-206ENST00000436769 VWDEQ8N2E2 1590 aa31.56■■■□□ 2.64
COL6A2-206ENST00000436769 CHIC2Q9UKJ5 165 aa31.54■■■□□ 2.64
COL6A2-206ENST00000436769 CPS1P31327 1500 aa31.54■■■□□ 2.64
COL6A2-206ENST00000436769 UBR1Q8IWV7 1749 aa31.52■■■□□ 2.64
COL6A2-206ENST00000436769 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.51■■■□□ 2.63
COL6A2-206ENST00000436769 ANKRD30AQ9BXX3 1397 aa31.51■■■□□ 2.63
COL6A2-206ENST00000436769 IQGAP1P46940 1657 aa31.51■■■□□ 2.63
COL6A2-206ENST00000436769 DISP3Q9P2K9 1392 aa31.5■■■□□ 2.63
COL6A2-206ENST00000436769 ADGRL2O95490 1459 aa31.44■■■□□ 2.62
COL6A2-206ENST00000436769 LMTK2Q8IWU2 1503 aa31.44■■■□□ 2.62
COL6A2-206ENST00000436769 KANK1Q14678 1352 aa31.43■■■□□ 2.62
COL6A2-206ENST00000436769 ARHGAP23Q9P227 1491 aa31.42■■■□□ 2.62
COL6A2-206ENST00000436769 STRCP1A6NGW2 1772 aa31.42■■■□□ 2.62
COL6A2-206ENST00000436769 SLIT1O75093 1534 aa31.41■■■□□ 2.62
COL6A2-206ENST00000436769 LTKP29376 864 aa31.41■■■□□ 2.62
COL6A2-206ENST00000436769 ILDR2Q71H61 639 aa31.41■■■□□ 2.62
COL6A2-206ENST00000436769 SCAF11Q99590 1463 aaKnown RBP31.39■■■□□ 2.62
COL6A2-206ENST00000436769 TOM1O60784 492 aa31.38■■■□□ 2.61
COL6A2-206ENST00000436769 FAM50AQ14320 339 aaKnown RBP31.38■■■□□ 2.61
COL6A2-206ENST00000436769 PIK3C2BO00750 1634 aa31.38■■■□□ 2.61
COL6A2-206ENST00000436769 TXNDC2Q86VQ3 553 aa31.36■■■□□ 2.61
COL6A2-206ENST00000436769 PIP4K2BP78356 416 aa31.33■■■□□ 2.61
COL6A2-206ENST00000436769 IDI1Q13907 227 aa31.33■■■□□ 2.61
COL6A2-206ENST00000436769 ALKQ9UM73 1620 aa31.33■■■□□ 2.61
COL6A2-206ENST00000436769 LRRC7Q96NW7 1537 aa31.33■■■□□ 2.61
COL6A2-206ENST00000436769 SYNMO15061 1565 aa31.31■■■□□ 2.6
COL6A2-206ENST00000436769 EFCAB6Q5THR3 1501 aa31.31■■■□□ 2.6
COL6A2-206ENST00000436769 NOS1P29475 1434 aa31.31■■■□□ 2.6
COL6A2-206ENST00000436769 TMEM2Q9UHN6 1383 aa31.3■■■□□ 2.6
COL6A2-206ENST00000436769 KDM5AP29375 1690 aaKnown RBP31.3■■■□□ 2.6
COL6A2-206ENST00000436769 ANKRD50Q9ULJ7 1429 aa31.3■■■□□ 2.6
COL6A2-206ENST00000436769 HSPA1LP34931 641 aa31.29■■■□□ 2.6
COL6A2-206ENST00000436769 SCAF1Q9H7N4 1312 aaKnown RBP31.28■■■□□ 2.6
COL6A2-206ENST00000436769 EID1Q9Y6B2 187 aa31.28■■■□□ 2.6
COL6A2-206ENST00000436769 STAG3Q9UJ98 1225 aa31.25■■■□□ 2.59
COL6A2-206ENST00000436769 SLC52A1Q9NWF4 448 aa31.21■■■□□ 2.59
COL6A2-206ENST00000436769 RPRD2Q5VT52 1461 aaKnown RBP31.2■■■□□ 2.58
COL6A2-206ENST00000436769 XIRP1Q702N8 1843 aaKnown RBP31.17■■■□□ 2.58
COL6A2-206ENST00000436769 TET3O43151 1660 aa31.17■■■□□ 2.58
COL6A2-206ENST00000436769 ADGRB3O60242 1522 aa31.17■■■□□ 2.58
COL6A2-206ENST00000436769 SOCS7O14512 581 aa31.16■■■□□ 2.58
COL6A2-206ENST00000436769 ROCK1Q13464 1354 aa31.15■■■□□ 2.58
COL6A2-206ENST00000436769 UNC13BO14795 1591 aa31.14■■■□□ 2.58
COL6A2-206ENST00000436769 GCC2Q8IWJ2 1684 aa31.11■■■□□ 2.57
COL6A2-206ENST00000436769 SLC26A8Q96RN1 970 aa31.1■■■□□ 2.57
COL6A2-206ENST00000436769 MYO5BQ9ULV0 1848 aa31.09■■■□□ 2.57
COL6A2-206ENST00000436769 KCNA6P17658 529 aa31.08■■■□□ 2.57
COL6A2-206ENST00000436769 PPARGC1BQ86YN6 1023 aaKnown RBP31.06■■■□□ 2.56
COL6A2-206ENST00000436769 MED1Q15648 1581 aaPredicted RBP31.05■■■□□ 2.56
COL6A2-206ENST00000436769 E9PCH4 1651 aa31.05■■■□□ 2.56
COL6A2-206ENST00000436769 ZFYVE9O95405 1425 aa31.05■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms