RNA–Protein interactions for RNA: ENST00000436754.5

PDLIM2-211, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-211ENST00000436754 CEP170BQ9Y4F5 1589 aaPredicted RBP17.28■□□□□ 0.36
PDLIM2-211ENST00000436754 FAM135AQ9P2D6 1515 aa17.27■□□□□ 0.36
PDLIM2-211ENST00000436754 TCOF1Q13428 1488 aaKnown RBP17.27■□□□□ 0.36
PDLIM2-211ENST00000436754 APLP2Q06481 763 aa17.27■□□□□ 0.36
PDLIM2-211ENST00000436754 ARHGEF5Q12774 1597 aa17.26■□□□□ 0.35
PDLIM2-211ENST00000436754 A2ML1A8K2U0 1454 aa17.24■□□□□ 0.35
PDLIM2-211ENST00000436754 KANK4Q5T7N3 995 aaPredicted RBP17.24■□□□□ 0.35
PDLIM2-211ENST00000436754 WASHC2CQ9Y4E1 1318 aa17.23■□□□□ 0.35
PDLIM2-211ENST00000436754 KDM5DQ9BY66 1539 aa17.22■□□□□ 0.35
PDLIM2-211ENST00000436754 FBXO31Q5XUX0 539 aaPredicted RBP17.22■□□□□ 0.35
PDLIM2-211ENST00000436754 PZPP20742 1482 aa17.22■□□□□ 0.35
PDLIM2-211ENST00000436754 ZNF335Q9H4Z2 1342 aaPredicted RBP17.21■□□□□ 0.35
PDLIM2-211ENST00000436754 DNMT1P26358 1616 aaKnown RBP17.21■□□□□ 0.35
PDLIM2-211ENST00000436754 TNRQ92752 1358 aa17.21■□□□□ 0.35
PDLIM2-211ENST00000436754 MIA2Q96PC5 1412 aa17.2■□□□□ 0.34
PDLIM2-211ENST00000436754 MAST1Q9Y2H9 1570 aa17.18■□□□□ 0.34
PDLIM2-211ENST00000436754 THEMISQ8N1K5 641 aaPredicted RBP17.17■□□□□ 0.34
PDLIM2-211ENST00000436754 MYOM3Q5VTT5 1437 aa17.16■□□□□ 0.34
PDLIM2-211ENST00000436754 NLRP1Q9C000 1473 aa17.16■□□□□ 0.34
PDLIM2-211ENST00000436754 ANKLE2Q86XL3 938 aa17.15■□□□□ 0.34
PDLIM2-211ENST00000436754 RNF17Q9BXT8 1623 aaKnown RBP17.13■□□□□ 0.33
PDLIM2-211ENST00000436754 DISP3Q9P2K9 1392 aa17.13■□□□□ 0.33
PDLIM2-211ENST00000436754 UBAP1LF5GYI3 381 aa17.12■□□□□ 0.33
PDLIM2-211ENST00000436754 EIF2AK4Q9P2K8 1649 aaKnown RBP17.11■□□□□ 0.33
PDLIM2-211ENST00000436754 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.11■□□□□ 0.33
PDLIM2-211ENST00000436754 MED14O60244 1454 aa17.11■□□□□ 0.33
PDLIM2-211ENST00000436754 NEURL4Q96JN8 1562 aa17.11■□□□□ 0.33
PDLIM2-211ENST00000436754 ABCC3O15438 1527 aa17.1■□□□□ 0.33
PDLIM2-211ENST00000436754 UGGT1Q9NYU2 1555 aa17.1■□□□□ 0.33
PDLIM2-211ENST00000436754 ZC3H13Q5T200 1668 aaKnown RBP17.1■□□□□ 0.33
PDLIM2-211ENST00000436754 POLR1AO95602 1720 aaPredicted RBP17.1■□□□□ 0.33
PDLIM2-211ENST00000436754 CPS1P31327 1500 aa17.09■□□□□ 0.33
PDLIM2-211ENST00000436754 SPATA31D1Q6ZQQ2 1576 aa17.08■□□□□ 0.32
PDLIM2-211ENST00000436754 DUOX2Q9NRD8 1548 aa17.08■□□□□ 0.32
PDLIM2-211ENST00000436754 SHANK2Q9UPX8 1470 aa17.08■□□□□ 0.32
PDLIM2-211ENST00000436754 DEPDC5O75140 1603 aa17.07■□□□□ 0.32
PDLIM2-211ENST00000436754 PTPN23Q9H3S7 1636 aa17.07■□□□□ 0.32
PDLIM2-211ENST00000436754 ILDR2Q71H61 639 aa17.07■□□□□ 0.32
PDLIM2-211ENST00000436754 MROH1Q8NDA8 1641 aa17.06■□□□□ 0.32
PDLIM2-211ENST00000436754 TOM1O60784 492 aa17.05■□□□□ 0.32
PDLIM2-211ENST00000436754 ERVK-7P63135 1459 aa17.05■□□□□ 0.32
PDLIM2-211ENST00000436754 ABCC5O15440 1437 aa17.04■□□□□ 0.32
PDLIM2-211ENST00000436754 NPHP4O75161 1426 aaPredicted RBP17.04■□□□□ 0.32
PDLIM2-211ENST00000436754 FGD6Q6ZV73 1430 aa17.04■□□□□ 0.32
PDLIM2-211ENST00000436754 ARHGAP31Q2M1Z3 1444 aa17.04■□□□□ 0.32
PDLIM2-211ENST00000436754 SOCS7O14512 581 aa17.03■□□□□ 0.32
PDLIM2-211ENST00000436754 ERBINQ96RT1 1412 aa17.03■□□□□ 0.32
PDLIM2-211ENST00000436754 VWDEQ8N2E2 1590 aa17.02■□□□□ 0.32
PDLIM2-211ENST00000436754 CROCC2H7BZ55 1655 aa17.02■□□□□ 0.32
PDLIM2-211ENST00000436754 KIF15Q9NS87 1388 aa17.02■□□□□ 0.31
PDLIM2-211ENST00000436754 RRP7BPQ9NSQ0 103 aa17.01■□□□□ 0.31
PDLIM2-211ENST00000436754 DAPK1P53355 1430 aa16.99■□□□□ 0.31
PDLIM2-211ENST00000436754 PRDM15P57071 1507 aaPredicted RBP16.99■□□□□ 0.31
PDLIM2-211ENST00000436754 IQGAP1P46940 1657 aa16.98■□□□□ 0.31
PDLIM2-211ENST00000436754 CEP152O94986 1710 aa16.98■□□□□ 0.31
PDLIM2-211ENST00000436754 UBR1Q8IWV7 1749 aa16.96■□□□□ 0.31
PDLIM2-211ENST00000436754 ANKRD30AQ9BXX3 1397 aa16.96■□□□□ 0.31
PDLIM2-211ENST00000436754 ARHGAP23Q9P227 1491 aa16.95■□□□□ 0.3
PDLIM2-211ENST00000436754 KANK1Q14678 1352 aa16.95■□□□□ 0.3
PDLIM2-211ENST00000436754 HSPA1LP34931 641 aa16.95■□□□□ 0.3
PDLIM2-211ENST00000436754 PIP4K2BP78356 416 aa16.95■□□□□ 0.3
PDLIM2-211ENST00000436754 FAM50AQ14320 339 aaKnown RBP16.95■□□□□ 0.3
PDLIM2-211ENST00000436754 SLIT1O75093 1534 aa16.95■□□□□ 0.3
PDLIM2-211ENST00000436754 CFAP65Q6ZU64 1925 aaKnown RBP16.94■□□□□ 0.3
PDLIM2-211ENST00000436754 LTKP29376 864 aa16.94■□□□□ 0.3
PDLIM2-211ENST00000436754 TXNDC2Q86VQ3 553 aa16.94■□□□□ 0.3
PDLIM2-211ENST00000436754 SCAF11Q99590 1463 aaKnown RBP16.93■□□□□ 0.3
PDLIM2-211ENST00000436754 LMTK2Q8IWU2 1503 aa16.93■□□□□ 0.3
PDLIM2-211ENST00000436754 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.93■□□□□ 0.3
PDLIM2-211ENST00000436754 LRRC7Q96NW7 1537 aa16.92■□□□□ 0.3
PDLIM2-211ENST00000436754 PPARGC1BQ86YN6 1023 aaKnown RBP16.92■□□□□ 0.3
PDLIM2-211ENST00000436754 EID1Q9Y6B2 187 aa16.92■□□□□ 0.3
PDLIM2-211ENST00000436754 SCAF1Q9H7N4 1312 aaKnown RBP16.92■□□□□ 0.3
PDLIM2-211ENST00000436754 CHIC2Q9UKJ5 165 aa16.91■□□□□ 0.3
PDLIM2-211ENST00000436754 ALKQ9UM73 1620 aa16.91■□□□□ 0.3
PDLIM2-211ENST00000436754 STRCP1A6NGW2 1772 aa16.9■□□□□ 0.3
PDLIM2-211ENST00000436754 IDI1Q13907 227 aa16.9■□□□□ 0.3
PDLIM2-211ENST00000436754 TMEM2Q9UHN6 1383 aa16.89■□□□□ 0.3
PDLIM2-211ENST00000436754 KDM5AP29375 1690 aaKnown RBP16.89■□□□□ 0.29
PDLIM2-211ENST00000436754 SYNMO15061 1565 aa16.89■□□□□ 0.29
PDLIM2-211ENST00000436754 ADGRL2O95490 1459 aa16.88■□□□□ 0.29
PDLIM2-211ENST00000436754 PIK3C2BO00750 1634 aa16.86■□□□□ 0.29
PDLIM2-211ENST00000436754 SLC52A1Q9NWF4 448 aa16.86■□□□□ 0.29
PDLIM2-211ENST00000436754 STAG3Q9UJ98 1225 aa16.86■□□□□ 0.29
PDLIM2-211ENST00000436754 NOS1P29475 1434 aa16.86■□□□□ 0.29
PDLIM2-211ENST00000436754 EFCAB6Q5THR3 1501 aa16.84■□□□□ 0.29
PDLIM2-211ENST00000436754 RPRD2Q5VT52 1461 aaKnown RBP16.82■□□□□ 0.28
PDLIM2-211ENST00000436754 ANKRD50Q9ULJ7 1429 aa16.82■□□□□ 0.28
PDLIM2-211ENST00000436754 KCNA6P17658 529 aa16.82■□□□□ 0.28
PDLIM2-211ENST00000436754 MED1Q15648 1581 aaPredicted RBP16.81■□□□□ 0.28
PDLIM2-211ENST00000436754 TET3O43151 1660 aa16.81■□□□□ 0.28
PDLIM2-211ENST00000436754 ITGAEP38570 1179 aa16.78■□□□□ 0.28
PDLIM2-211ENST00000436754 XIRP1Q702N8 1843 aaKnown RBP16.77■□□□□ 0.28
PDLIM2-211ENST00000436754 HDGFP51858 240 aaKnown RBP16.77■□□□□ 0.28
PDLIM2-211ENST00000436754 FAM135BQ49AJ0 1406 aa16.77■□□□□ 0.27
PDLIM2-211ENST00000436754 ADGRB3O60242 1522 aa16.76■□□□□ 0.27
PDLIM2-211ENST00000436754 SLC26A8Q96RN1 970 aa16.76■□□□□ 0.27
PDLIM2-211ENST00000436754 TMEM94Q12767 1356 aa16.75■□□□□ 0.27
PDLIM2-211ENST00000436754 ROCK1Q13464 1354 aa16.75■□□□□ 0.27
PDLIM2-211ENST00000436754 RRBP1Q9P2E9 1410 aaKnown RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms