RNA–Protein interactions for RNA: ENST00000436368.6

RBFOX1-205, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-205ENST00000436368 ERICH6BQ5W0A0 696 aa21.54■■□□□ 1.04
RBFOX1-205ENST00000436368 CARD11Q9BXL7 1154 aa21.54■■□□□ 1.04
RBFOX1-205ENST00000436368 MRS2Q9HD23 443 aa21.54■■□□□ 1.04
RBFOX1-205ENST00000436368 MAGI2Q86UL8 1455 aa21.53■■□□□ 1.04
RBFOX1-205ENST00000436368 ABCC1P33527 1531 aa21.52■■□□□ 1.03
RBFOX1-205ENST00000436368 EIF2AK4Q9P2K8 1649 aaKnown RBP21.51■■□□□ 1.03
RBFOX1-205ENST00000436368 ATP10AO60312 1499 aa21.51■■□□□ 1.03
RBFOX1-205ENST00000436368 ERCC6L2Q5T890 1561 aa21.5■■□□□ 1.03
RBFOX1-205ENST00000436368 ZBED9Q6R2W3 1325 aa21.49■■□□□ 1.03
RBFOX1-205ENST00000436368 LAMC1P11047 1609 aa21.48■■□□□ 1.03
RBFOX1-205ENST00000436368 RTEL1-TNFRSF6BF6WH68 1400 aa21.48■■□□□ 1.03
RBFOX1-205ENST00000436368 PRAG1Q86YV5 1406 aa21.46■■□□□ 1.03
RBFOX1-205ENST00000436368 DCAF11Q8TEB1 546 aa21.46■■□□□ 1.03
RBFOX1-205ENST00000436368 DHX29Q7Z478 1369 aaKnown RBP21.46■■□□□ 1.03
RBFOX1-205ENST00000436368 BCORL1Q5H9F3 1711 aa21.44■■□□□ 1.02
RBFOX1-205ENST00000436368 GPRASP1Q5JY77 1395 aa21.43■■□□□ 1.02
RBFOX1-205ENST00000436368 TRPM1Q7Z4N2 1603 aa21.41■■□□□ 1.02
RBFOX1-205ENST00000436368 STAC3Q96MF2 364 aa21.4■■□□□ 1.02
RBFOX1-205ENST00000436368 FAM9BQ8IZU0 186 aa21.39■■□□□ 1.02
RBFOX1-205ENST00000436368 KDM2AQ9Y2K7 1162 aa21.39■■□□□ 1.02
RBFOX1-205ENST00000436368 WDR7Q9Y4E6 1490 aa21.39■■□□□ 1.02
RBFOX1-205ENST00000436368 RALBP1Q15311 655 aa21.38■■□□□ 1.01
RBFOX1-205ENST00000436368 BCANQ96GW7 911 aa21.38■■□□□ 1.01
RBFOX1-205ENST00000436368 POLR3GLQ9BT43 218 aa21.38■■□□□ 1.01
RBFOX1-205ENST00000436368 SPAG9O60271 1321 aaKnown RBP21.38■■□□□ 1.01
RBFOX1-205ENST00000436368 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.37■■□□□ 1.01
RBFOX1-205ENST00000436368 A2MP01023 1474 aa21.36■■□□□ 1.01
RBFOX1-205ENST00000436368 PLA2R1Q13018 1463 aa21.36■■□□□ 1.01
RBFOX1-205ENST00000436368 ZFYVE16Q7Z3T8 1539 aa21.35■■□□□ 1.01
RBFOX1-205ENST00000436368 TSHZ2Q9NRE2 1034 aa21.35■■□□□ 1.01
RBFOX1-205ENST00000436368 KANK1Q14678 1352 aa21.35■■□□□ 1.01
RBFOX1-205ENST00000436368 ST20-MTHFSA0A0A6YYL1 179 aa21.34■■□□□ 1.01
RBFOX1-205ENST00000436368 PRDM15P57071 1507 aaPredicted RBP21.34■■□□□ 1.01
RBFOX1-205ENST00000436368 BRD4O60885 1362 aaPredicted RBP21.34■■□□□ 1.01
RBFOX1-205ENST00000436368 E9PCH4 1651 aa21.33■■□□□ 1
RBFOX1-205ENST00000436368 TRAPPC8Q9Y2L5 1435 aa21.32■■□□□ 1
RBFOX1-205ENST00000436368 ABCA9Q8IUA7 1624 aa21.31■■□□□ 1
RBFOX1-205ENST00000436368 MYBBP1AQ9BQG0 1328 aaKnown RBP21.31■■□□□ 1
RBFOX1-205ENST00000436368 WASHC2CQ9Y4E1 1318 aa21.31■■□□□ 1
RBFOX1-205ENST00000436368 CCDC184Q52MB2 194 aa21.31■■□□□ 1
RBFOX1-205ENST00000436368 TRPM2O94759 1503 aa21.31■■□□□ 1
RBFOX1-205ENST00000436368 COL17A1Q9UMD9 1497 aaPredicted RBP21.3■■□□□ 1
RBFOX1-205ENST00000436368 TMC1Q8TDI8 760 aa21.29■■□□□ 1
RBFOX1-205ENST00000436368 SMG6Q86US8 1419 aaKnown RBP21.29■■□□□ 1
RBFOX1-205ENST00000436368 DEPDC5O75140 1603 aa21.29■■□□□ 1
RBFOX1-205ENST00000436368 FANCAO15360 1455 aa21.28■■□□□ 1
RBFOX1-205ENST00000436368 INO80Q9ULG1 1556 aaPredicted RBP21.28■■□□□ 1
RBFOX1-205ENST00000436368 ATP7AQ04656 1500 aa21.28■■□□□ 1
RBFOX1-205ENST00000436368 RNF17Q9BXT8 1623 aaKnown RBP21.27■■□□□ 1
RBFOX1-205ENST00000436368 NEURL4Q96JN8 1562 aa21.27■□□□□ 0.99
RBFOX1-205ENST00000436368 TET3O43151 1660 aa21.26■□□□□ 0.99
RBFOX1-205ENST00000436368 RGL3Q3MIN7 710 aa21.25■□□□□ 0.99
RBFOX1-205ENST00000436368 PPP4R2Q9NY27 417 aa21.25■□□□□ 0.99
RBFOX1-205ENST00000436368 PTPRTO14522 1441 aa21.24■□□□□ 0.99
RBFOX1-205ENST00000436368 TMF1P82094 1093 aa21.24■□□□□ 0.99
RBFOX1-205ENST00000436368 ADGRL1O94910 1474 aa21.23■□□□□ 0.99
RBFOX1-205ENST00000436368 INSRP06213 1382 aa21.22■□□□□ 0.99
RBFOX1-205ENST00000436368 CFAP74Q9C0B2 1584 aa21.22■□□□□ 0.99
RBFOX1-205ENST00000436368 SLC24A1O60721 1099 aa21.21■□□□□ 0.99
RBFOX1-205ENST00000436368 CDCA8Q53HL2 280 aa21.21■□□□□ 0.99
RBFOX1-205ENST00000436368 NLRP13Q86W25 1043 aa21.21■□□□□ 0.99
RBFOX1-205ENST00000436368 VWDEQ8N2E2 1590 aa21.2■□□□□ 0.99
RBFOX1-205ENST00000436368 PNISRQ8TF01 805 aaKnown RBP21.2■□□□□ 0.98
RBFOX1-205ENST00000436368 NUDCQ9Y266 331 aa21.2■□□□□ 0.98
RBFOX1-205ENST00000436368 ZMYM4Q5VZL5 1548 aa21.2■□□□□ 0.98
RBFOX1-205ENST00000436368 SCAPERQ9BY12 1400 aa21.2■□□□□ 0.98
RBFOX1-205ENST00000436368 SPHKAPQ2M3C7 1700 aa21.2■□□□□ 0.98
RBFOX1-205ENST00000436368 LRPPRCP42704 1394 aaKnown RBP21.2■□□□□ 0.98
RBFOX1-205ENST00000436368 CEP152O94986 1710 aa21.19■□□□□ 0.98
RBFOX1-205ENST00000436368 EIF3AQ14152 1382 aaKnown RBP21.19■□□□□ 0.98
RBFOX1-205ENST00000436368 PARD3Q8TEW0 1356 aa21.19■□□□□ 0.98
RBFOX1-205ENST00000436368 MADDQ8WXG6 1647 aa21.18■□□□□ 0.98
RBFOX1-205ENST00000436368 ASXL2Q76L83 1435 aa21.17■□□□□ 0.98
RBFOX1-205ENST00000436368 NPM1P06748 294 aaKnown RBP eCLIP21.16■□□□□ 0.98
RBFOX1-205ENST00000436368 AFAP1Q8N556 730 aa21.15■□□□□ 0.98
RBFOX1-205ENST00000436368 ZNF518AQ6AHZ1 1483 aa21.15■□□□□ 0.98
RBFOX1-205ENST00000436368 NBPF1Q3BBV0 1214 aa21.14■□□□□ 0.98
RBFOX1-205ENST00000436368 SCAF11Q99590 1463 aaKnown RBP21.13■□□□□ 0.97
RBFOX1-205ENST00000436368 TESK2Q96S53 571 aa21.13■□□□□ 0.97
RBFOX1-205ENST00000436368 KIAA1210Q9ULL0 1709 aa21.12■□□□□ 0.97
RBFOX1-205ENST00000436368 PDE3BQ13370 1112 aa21.11■□□□□ 0.97
RBFOX1-205ENST00000436368 MYT1LQ9UL68 1186 aa21.11■□□□□ 0.97
RBFOX1-205ENST00000436368 MYOM2P54296 1465 aa21.11■□□□□ 0.97
RBFOX1-205ENST00000436368 LMTK2Q8IWU2 1503 aa21.11■□□□□ 0.97
RBFOX1-205ENST00000436368 CLTCL1P53675 1640 aa21.11■□□□□ 0.97
RBFOX1-205ENST00000436368 IQGAP1P46940 1657 aa21.11■□□□□ 0.97
RBFOX1-205ENST00000436368 DISP3Q9P2K9 1392 aa21.09■□□□□ 0.97
RBFOX1-205ENST00000436368 EFCAB6Q5THR3 1501 aa21.08■□□□□ 0.97
RBFOX1-205ENST00000436368 RNF123Q5XPI4 1314 aa21.07■□□□□ 0.96
RBFOX1-205ENST00000436368 SYNMO15061 1565 aa21.07■□□□□ 0.96
RBFOX1-205ENST00000436368 KIF3BO15066 747 aa21.07■□□□□ 0.96
RBFOX1-205ENST00000436368 CNGB1Q14028 1251 aaPredicted RBP21.07■□□□□ 0.96
RBFOX1-205ENST00000436368 IRX6P78412 446 aaPredicted RBP21.06■□□□□ 0.96
RBFOX1-205ENST00000436368 PER1O15534 1290 aaPredicted RBP21.05■□□□□ 0.96
RBFOX1-205ENST00000436368 MROH1Q8NDA8 1641 aa21.04■□□□□ 0.96
RBFOX1-205ENST00000436368 OSCARQ8IYS5 282 aa21.03■□□□□ 0.96
RBFOX1-205ENST00000436368 POGZQ7Z3K3 1410 aa21.02■□□□□ 0.96
RBFOX1-205ENST00000436368 PANK3Q9H999 370 aa21.02■□□□□ 0.96
RBFOX1-205ENST00000436368 RBM19Q9Y4C8 960 aaKnown RBP21.02■□□□□ 0.96
RBFOX1-205ENST00000436368 MLH3Q9UHC1 1453 aa21.02■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms