RNA–Protein interactions for RNA: ENST00000436354.2

UBXN1-203, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-203ENST00000436354 CCDC141Q6ZP82 1450 aa29.43■■■□□ 2.3
UBXN1-203ENST00000436354 RSPH4AQ5TD94 716 aa29.43■■■□□ 2.3
UBXN1-203ENST00000436354 TNRQ92752 1358 aa29.42■■■□□ 2.3
UBXN1-203ENST00000436354 FAM135AQ9P2D6 1515 aa29.42■■■□□ 2.3
UBXN1-203ENST00000436354 KDM5DQ9BY66 1539 aa29.4■■■□□ 2.3
UBXN1-203ENST00000436354 POLR1AO95602 1720 aaPredicted RBP29.4■■■□□ 2.3
UBXN1-203ENST00000436354 FBXO31Q5XUX0 539 aaPredicted RBP29.4■■■□□ 2.3
UBXN1-203ENST00000436354 PZPP20742 1482 aa29.39■■■□□ 2.3
UBXN1-203ENST00000436354 CAMSAP2Q08AD1 1489 aa29.39■■■□□ 2.3
UBXN1-203ENST00000436354 WASHC2CQ9Y4E1 1318 aa29.38■■■□□ 2.29
UBXN1-203ENST00000436354 NCOA2Q15596 1464 aa29.37■■■□□ 2.29
UBXN1-203ENST00000436354 NEURL4Q96JN8 1562 aa29.35■■■□□ 2.29
UBXN1-203ENST00000436354 CPS1P31327 1500 aa29.34■■■□□ 2.29
UBXN1-203ENST00000436354 ANKLE2Q86XL3 938 aa29.31■■■□□ 2.28
UBXN1-203ENST00000436354 THEMISQ8N1K5 641 aaPredicted RBP29.31■■■□□ 2.28
UBXN1-203ENST00000436354 ARHGEF5Q12774 1597 aa29.3■■■□□ 2.28
UBXN1-203ENST00000436354 SHANK2Q9UPX8 1470 aa29.3■■■□□ 2.28
UBXN1-203ENST00000436354 TSPY4P0CV99 314 aa29.3■■■□□ 2.28
UBXN1-203ENST00000436354 TSPY10P0CW01 314 aa29.3■■■□□ 2.28
UBXN1-203ENST00000436354 NLRP1Q9C000 1473 aa29.29■■■□□ 2.28
UBXN1-203ENST00000436354 MIA2Q96PC5 1412 aa29.29■■■□□ 2.28
UBXN1-203ENST00000436354 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.28■■■□□ 2.28
UBXN1-203ENST00000436354 TOM1O60784 492 aa29.28■■■□□ 2.28
UBXN1-203ENST00000436354 SCAF1Q9H7N4 1312 aaKnown RBP29.27■■■□□ 2.28
UBXN1-203ENST00000436354 UGGT1Q9NYU2 1555 aa29.26■■■□□ 2.27
UBXN1-203ENST00000436354 PIP4K2BP78356 416 aa29.25■■■□□ 2.27
UBXN1-203ENST00000436354 DEPDC5O75140 1603 aa29.23■■■□□ 2.27
UBXN1-203ENST00000436354 HSPA1LP34931 641 aa29.22■■■□□ 2.27
UBXN1-203ENST00000436354 MED14O60244 1454 aa29.22■■■□□ 2.27
UBXN1-203ENST00000436354 VWDEQ8N2E2 1590 aa29.21■■■□□ 2.27
UBXN1-203ENST00000436354 NPHP4O75161 1426 aaPredicted RBP29.2■■■□□ 2.27
UBXN1-203ENST00000436354 RNF17Q9BXT8 1623 aaKnown RBP29.2■■■□□ 2.26
UBXN1-203ENST00000436354 ZC3H13Q5T200 1668 aaKnown RBP29.18■■■□□ 2.26
UBXN1-203ENST00000436354 MAST1Q9Y2H9 1570 aa29.17■■■□□ 2.26
UBXN1-203ENST00000436354 LRRC9Q6ZRR7 1453 aa29.16■■■□□ 2.26
UBXN1-203ENST00000436354 IQGAP1P46940 1657 aa29.15■■■□□ 2.26
UBXN1-203ENST00000436354 ABCC3O15438 1527 aa29.15■■■□□ 2.26
UBXN1-203ENST00000436354 MED1Q15648 1581 aaPredicted RBP29.13■■■□□ 2.25
UBXN1-203ENST00000436354 EIF2AK4Q9P2K8 1649 aaKnown RBP29.13■■■□□ 2.25
UBXN1-203ENST00000436354 VPS8Q8N3P4 1428 aa29.1■■■□□ 2.25
UBXN1-203ENST00000436354 ERVK-7P63135 1459 aa29.09■■■□□ 2.25
UBXN1-203ENST00000436354 MROH1Q8NDA8 1641 aa29.05■■■□□ 2.24
UBXN1-203ENST00000436354 ALKQ9UM73 1620 aa29.05■■■□□ 2.24
UBXN1-203ENST00000436354 STRCP1A6NGW2 1772 aa29.03■■■□□ 2.24
UBXN1-203ENST00000436354 CEP152O94986 1710 aa29.03■■■□□ 2.24
UBXN1-203ENST00000436354 MAP3K1Q13233 1512 aa29.03■■■□□ 2.24
UBXN1-203ENST00000436354 MYOM3Q5VTT5 1437 aa29.03■■■□□ 2.24
UBXN1-203ENST00000436354 SYNMO15061 1565 aa29.02■■■□□ 2.24
UBXN1-203ENST00000436354 LRRC7Q96NW7 1537 aa29.02■■■□□ 2.24
UBXN1-203ENST00000436354 UBR1Q8IWV7 1749 aa29.02■■■□□ 2.24
UBXN1-203ENST00000436354 CFAP65Q6ZU64 1925 aaKnown RBP29.02■■■□□ 2.24
UBXN1-203ENST00000436354 DUOX2Q9NRD8 1548 aa29.01■■■□□ 2.23
UBXN1-203ENST00000436354 KANK4Q5T7N3 995 aaPredicted RBP29■■■□□ 2.23
UBXN1-203ENST00000436354 SCAF11Q99590 1463 aaKnown RBP28.97■■■□□ 2.23
UBXN1-203ENST00000436354 PHF23Q9BUL5 403 aaPredicted RBP28.96■■■□□ 2.23
UBXN1-203ENST00000436354 ARHGAP31Q2M1Z3 1444 aa28.94■■■□□ 2.22
UBXN1-203ENST00000436354 ARHGAP23Q9P227 1491 aa28.92■■■□□ 2.22
UBXN1-203ENST00000436354 TXNDC2Q86VQ3 553 aa28.92■■■□□ 2.22
UBXN1-203ENST00000436354 SLIT1O75093 1534 aa28.92■■■□□ 2.22
UBXN1-203ENST00000436354 PRDM15P57071 1507 aaPredicted RBP28.92■■■□□ 2.22
UBXN1-203ENST00000436354 KIF15Q9NS87 1388 aa28.91■■■□□ 2.22
UBXN1-203ENST00000436354 LOC105371045A0A1W2PR82 267 aa28.91■■■□□ 2.22
UBXN1-203ENST00000436354 LTKP29376 864 aa28.9■■■□□ 2.22
UBXN1-203ENST00000436354 ERBINQ96RT1 1412 aa28.9■■■□□ 2.22
UBXN1-203ENST00000436354 SENP3Q9H4L4 574 aaPredicted RBP28.89■■■□□ 2.22
UBXN1-203ENST00000436354 EID1Q9Y6B2 187 aa28.88■■■□□ 2.21
UBXN1-203ENST00000436354 CROCC2H7BZ55 1655 aa28.88■■■□□ 2.21
UBXN1-203ENST00000436354 RRP7BPQ9NSQ0 103 aa28.87■■■□□ 2.21
UBXN1-203ENST00000436354 ABCC5O15440 1437 aa28.85■■■□□ 2.21
UBXN1-203ENST00000436354 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.84■■■□□ 2.21
UBXN1-203ENST00000436354 KANK1Q14678 1352 aa28.83■■■□□ 2.21
UBXN1-203ENST00000436354 PIK3C2BO00750 1634 aa28.83■■■□□ 2.21
UBXN1-203ENST00000436354 PTPN23Q9H3S7 1636 aa28.83■■■□□ 2.21
UBXN1-203ENST00000436354 XIRP1Q702N8 1843 aaKnown RBP28.81■■■□□ 2.2
UBXN1-203ENST00000436354 STAG3Q9UJ98 1225 aa28.81■■■□□ 2.2
UBXN1-203ENST00000436354 TMEM2Q9UHN6 1383 aa28.8■■■□□ 2.2
UBXN1-203ENST00000436354 DAPK1P53355 1430 aa28.78■■■□□ 2.2
UBXN1-203ENST00000436354 KDM5AP29375 1690 aaKnown RBP28.78■■■□□ 2.2
UBXN1-203ENST00000436354 APLP2Q06481 763 aa28.78■■■□□ 2.2
UBXN1-203ENST00000436354 EFCAB6Q5THR3 1501 aa28.75■■■□□ 2.19
UBXN1-203ENST00000436354 LMTK2Q8IWU2 1503 aa28.74■■■□□ 2.19
UBXN1-203ENST00000436354 ANKRD30AQ9BXX3 1397 aa28.73■■■□□ 2.19
UBXN1-203ENST00000436354 IDI1Q13907 227 aa28.72■■■□□ 2.19
UBXN1-203ENST00000436354 FAM135BQ49AJ0 1406 aa28.71■■■□□ 2.19
UBXN1-203ENST00000436354 FGD6Q6ZV73 1430 aa28.71■■■□□ 2.19
UBXN1-203ENST00000436354 KCNA6P17658 529 aa28.69■■■□□ 2.18
UBXN1-203ENST00000436354 CHIC2Q9UKJ5 165 aa28.69■■■□□ 2.18
UBXN1-203ENST00000436354 TMEM94Q12767 1356 aa28.68■■■□□ 2.18
UBXN1-203ENST00000436354 TET3O43151 1660 aa28.66■■■□□ 2.18
UBXN1-203ENST00000436354 SLC26A8Q96RN1 970 aa28.65■■■□□ 2.18
UBXN1-203ENST00000436354 RGS17Q9UGC6 210 aaPredicted RBP28.65■■■□□ 2.18
UBXN1-203ENST00000436354 NOS1P29475 1434 aa28.64■■■□□ 2.18
UBXN1-203ENST00000436354 PROSER2Q86WR7 435 aaPredicted RBP28.64■■■□□ 2.18
UBXN1-203ENST00000436354 SLC52A1Q9NWF4 448 aa28.62■■■□□ 2.17
UBXN1-203ENST00000436354 ADGRB3O60242 1522 aa28.62■■■□□ 2.17
UBXN1-203ENST00000436354 ROBO1Q9Y6N7 1651 aa28.59■■■□□ 2.17
UBXN1-203ENST00000436354 NKTRP30414 1462 aaKnown RBP28.59■■■□□ 2.17
UBXN1-203ENST00000436354 BCANQ96GW7 911 aa28.57■■■□□ 2.16
UBXN1-203ENST00000436354 ADGRL2O95490 1459 aa28.57■■■□□ 2.16
UBXN1-203ENST00000436354 NWD1Q149M9 1564 aa28.57■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms