RNA–Protein interactions for RNA: ENST00000435345.6

SCP2-207, Transcript of sterol carrier protein 2, humanhuman

TSL 1 (best) BASIC

Gene SCP2, Length 894 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCP2-207ENST00000435345 COL17A1Q9UMD9 1497 aaPredicted RBP13.07□□□□□ -0.32
SCP2-207ENST00000435345 C2orf72A6NCS6 295 aa13.06□□□□□ -0.32
SCP2-207ENST00000435345 GLI2P10070 1586 aa13.06□□□□□ -0.32
SCP2-207ENST00000435345 SNPHO15079 494 aa13.05□□□□□ -0.32
SCP2-207ENST00000435345 LCE2DQ5TA82 110 aaPredicted RBP13.04□□□□□ -0.32
SCP2-207ENST00000435345 PAXIP1Q6ZW49 1069 aaPredicted RBP13.04□□□□□ -0.32
SCP2-207ENST00000435345 FAM163AQ96GL9 167 aaPredicted RBP13.04□□□□□ -0.32
SCP2-207ENST00000435345 TOP2BQ02880 1626 aa13.03□□□□□ -0.32
SCP2-207ENST00000435345 BIVM-ERCC5R4GMW8 1640 aa13.03□□□□□ -0.32
SCP2-207ENST00000435345 TMC2Q8TDI7 906 aa13.02□□□□□ -0.33
SCP2-207ENST00000435345 CFAP44Q96MT7 982 aa13.02□□□□□ -0.33
SCP2-207ENST00000435345 ASXL2Q76L83 1435 aa13.02□□□□□ -0.33
SCP2-207ENST00000435345 ABCC2Q92887 1545 aa13.02□□□□□ -0.33
SCP2-207ENST00000435345 HOXB3P14651 431 aaPredicted RBP13.01□□□□□ -0.33
SCP2-207ENST00000435345 PLB1Q6P1J6 1458 aa13.01□□□□□ -0.33
SCP2-207ENST00000435345 GPHNQ9NQX3 736 aaPredicted RBP12.99□□□□□ -0.33
SCP2-207ENST00000435345 MAP3K4Q9Y6R4 1608 aa12.99□□□□□ -0.33
SCP2-207ENST00000435345 TEX14Q8IWB6 1497 aa12.98□□□□□ -0.33
SCP2-207ENST00000435345 ST18O60284 1047 aa12.98□□□□□ -0.33
SCP2-207ENST00000435345 CRISPLD2Q9H0B8 497 aa12.98□□□□□ -0.33
SCP2-207ENST00000435345 CUL7Q14999 1698 aa12.97□□□□□ -0.33
SCP2-207ENST00000435345 CADPS2Q86UW7 1296 aa12.97□□□□□ -0.33
SCP2-207ENST00000435345 KIAA0586Q9BVV6 1533 aa12.97□□□□□ -0.33
SCP2-207ENST00000435345 NCKAP5LQ9HCH0 1330 aa12.96□□□□□ -0.33
SCP2-207ENST00000435345 PTPRGP23470 1445 aa12.96□□□□□ -0.34
SCP2-207ENST00000435345 EPRSP07814 1512 aaKnown RBP12.95□□□□□ -0.34
SCP2-207ENST00000435345 DOK7Q18PE1 504 aa12.95□□□□□ -0.34
SCP2-207ENST00000435345 FOXK1P85037 733 aa12.94□□□□□ -0.34
SCP2-207ENST00000435345 TTBK1Q5TCY1 1321 aaPredicted RBP12.92□□□□□ -0.34
SCP2-207ENST00000435345 KIF21BO75037 1637 aa12.92□□□□□ -0.34
SCP2-207ENST00000435345 DSG2Q14126 1118 aa12.92□□□□□ -0.34
SCP2-207ENST00000435345 SOCS7O14512 581 aa12.91□□□□□ -0.34
SCP2-207ENST00000435345 PDE4AP27815 886 aa12.91□□□□□ -0.34
SCP2-207ENST00000435345 ILDR2Q71H61 639 aa12.9□□□□□ -0.34
SCP2-207ENST00000435345 UHRF1BP1LA0JNW5 1464 aa12.9□□□□□ -0.34
SCP2-207ENST00000435345 PLPP6Q8IY26 295 aa12.89□□□□□ -0.35
SCP2-207ENST00000435345 ZNF710Q8N1W2 664 aa12.89□□□□□ -0.35
SCP2-207ENST00000435345 TNIKQ9UKE5 1360 aa12.89□□□□□ -0.35
SCP2-207ENST00000435345 PCF11O94913 1555 aaKnown RBP12.87□□□□□ -0.35
SCP2-207ENST00000435345 DISP3Q9P2K9 1392 aa12.87□□□□□ -0.35
SCP2-207ENST00000435345 RIMBP2O15034 1052 aa12.87□□□□□ -0.35
SCP2-207ENST00000435345 LARP6Q9BRS8 491 aaKnown RBP12.87□□□□□ -0.35
SCP2-207ENST00000435345 MFSD10Q14728 455 aa12.86□□□□□ -0.35
SCP2-207ENST00000435345 ZSWIM6Q9HCJ5 1215 aa12.86□□□□□ -0.35
SCP2-207ENST00000435345 PTPRMP28827 1452 aa12.85□□□□□ -0.35
SCP2-207ENST00000435345 ZCCHC11Q5TAX3 1644 aaKnown RBP12.85□□□□□ -0.35
SCP2-207ENST00000435345 KDM5BQ9UGL1 1544 aa12.85□□□□□ -0.35
SCP2-207ENST00000435345 POTEMA6NI47 508 aa12.85□□□□□ -0.35
SCP2-207ENST00000435345 SLC34A2O95436 690 aa12.85□□□□□ -0.35
SCP2-207ENST00000435345 PPP1R15BQ5SWA1 713 aa12.85□□□□□ -0.35
SCP2-207ENST00000435345 CARMIL2Q6F5E8 1435 aa12.85□□□□□ -0.35
SCP2-207ENST00000435345 UACAQ9BZF9 1416 aa12.85□□□□□ -0.35
SCP2-207ENST00000435345 HOXB1P14653 301 aaPredicted RBP12.84□□□□□ -0.35
SCP2-207ENST00000435345 POTEGQ6S5H5 508 aa12.84□□□□□ -0.35
SCP2-207ENST00000435345 GPR153Q6NV75 609 aa12.83□□□□□ -0.36
SCP2-207ENST00000435345 MARVELD3Q96A59 401 aa12.83□□□□□ -0.36
SCP2-207ENST00000435345 DDX27Q96GQ7 796 aaKnown RBP12.83□□□□□ -0.36
SCP2-207ENST00000435345 PLCB2Q00722 1185 aa12.82□□□□□ -0.36
SCP2-207ENST00000435345 ADAMTSL3P82987 1691 aa12.82□□□□□ -0.36
SCP2-207ENST00000435345 WDR7Q9Y4E6 1490 aa12.81□□□□□ -0.36
SCP2-207ENST00000435345 SPATA31D1Q6ZQQ2 1576 aa12.81□□□□□ -0.36
SCP2-207ENST00000435345 IQGAP2Q13576 1575 aa12.8□□□□□ -0.36
SCP2-207ENST00000435345 MAGI3Q5TCQ9 1506 aa12.79□□□□□ -0.36
SCP2-207ENST00000435345 ARSIQ5FYB1 569 aa12.79□□□□□ -0.36
SCP2-207ENST00000435345 TSHZ2Q9NRE2 1034 aa12.79□□□□□ -0.36
SCP2-207ENST00000435345 EMP3P54852 163 aa12.78□□□□□ -0.36
SCP2-207ENST00000435345 PTCD2Q8WV60 388 aaKnown RBP12.78□□□□□ -0.36
SCP2-207ENST00000435345 PCDHGA4Q9Y5G9 962 aa12.78□□□□□ -0.36
SCP2-207ENST00000435345 CFAP43Q8NDM7 1665 aa12.77□□□□□ -0.36
SCP2-207ENST00000435345 KHSRPQ92945 711 aaKnown RBP eCLIP12.77□□□□□ -0.37
SCP2-207ENST00000435345 DISP1Q96F81 1524 aa12.77□□□□□ -0.37
SCP2-207ENST00000435345 MADDQ8WXG6 1647 aa12.77□□□□□ -0.37
SCP2-207ENST00000435345 IGF1RP08069 1367 aa12.76□□□□□ -0.37
SCP2-207ENST00000435345 CD109Q6YHK3 1445 aa12.76□□□□□ -0.37
SCP2-207ENST00000435345 CERKQ8TCT0 537 aa12.74□□□□□ -0.37
SCP2-207ENST00000435345 OXER1Q8TDS5 423 aa12.73□□□□□ -0.37
SCP2-207ENST00000435345 BCORL1Q5H9F3 1711 aa12.73□□□□□ -0.37
SCP2-207ENST00000435345 KIF27Q86VH2 1401 aa12.71□□□□□ -0.37
SCP2-207ENST00000435345 KIAA0556O60303 1618 aa12.7□□□□□ -0.38
SCP2-207ENST00000435345 FAM205CA6NFA0 338 aa12.7□□□□□ -0.38
SCP2-207ENST00000435345 NUDT7P0C024 238 aa12.7□□□□□ -0.38
SCP2-207ENST00000435345 HSPA2P54652 639 aa12.7□□□□□ -0.38
SCP2-207ENST00000435345 UPF1Q92900 1129 aaKnown RBP eCLIP12.7□□□□□ -0.38
SCP2-207ENST00000435345 ARAP3Q8WWN8 1544 aa12.7□□□□□ -0.38
SCP2-207ENST00000435345 POTEB3A0JP26 581 aa12.69□□□□□ -0.38
SCP2-207ENST00000435345 CAMK2BQ13554 666 aa12.69□□□□□ -0.38
SCP2-207ENST00000435345 POTEBQ6S5H4 581 aa12.69□□□□□ -0.38
SCP2-207ENST00000435345 EMILIN3Q9NT22 766 aa12.69□□□□□ -0.38
SCP2-207ENST00000435345 RIMS1Q86UR5 1692 aaKnown RBP12.69□□□□□ -0.38
SCP2-207ENST00000435345 TBC1D12O60347 775 aa12.68□□□□□ -0.38
SCP2-207ENST00000435345 HS3ST6Q96QI5 342 aa12.68□□□□□ -0.38
SCP2-207ENST00000435345 CARMIL1Q5VZK9 1371 aa12.68□□□□□ -0.38
SCP2-207ENST00000435345 UGGT2Q9NYU1 1516 aa12.67□□□□□ -0.38
SCP2-207ENST00000435345 ERBB3P21860 1342 aa12.67□□□□□ -0.38
SCP2-207ENST00000435345 ZNF316A6NFI3 1004 aaPredicted RBP12.64□□□□□ -0.39
SCP2-207ENST00000435345 WDR70Q9NW82 654 aa12.64□□□□□ -0.39
SCP2-207ENST00000435345 FRMPD1Q5SYB0 1578 aa12.64□□□□□ -0.39
SCP2-207ENST00000435345 ARHGEF40Q8TER5 1519 aa12.63□□□□□ -0.39
SCP2-207ENST00000435345 VARS2Q5ST30 1063 aaKnown RBP12.63□□□□□ -0.39
SCP2-207ENST00000435345 KCNH8Q96L42 1107 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms