RNA–Protein interactions for RNA: ENST00000435213.6

GARNL3-205, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2 BASIC

Gene GARNL3, Length 3,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-205ENST00000435213 TAOK2Q9UL54 1235 aa9.55□□□□□ -0.88
GARNL3-205ENST00000435213 VGFO15240 615 aaPredicted RBP9.54□□□□□ -0.88
GARNL3-205ENST00000435213 PLCD3Q8N3E9 789 aa9.54□□□□□ -0.88
GARNL3-205ENST00000435213 MRS2Q9HD23 443 aa9.53□□□□□ -0.88
GARNL3-205ENST00000435213 CCDC184Q52MB2 194 aa9.53□□□□□ -0.88
GARNL3-205ENST00000435213 ANP32BQ92688 251 aaKnown RBP9.53□□□□□ -0.88
GARNL3-205ENST00000435213 RNF123Q5XPI4 1314 aa9.53□□□□□ -0.88
GARNL3-205ENST00000435213 KDM6BO15054 1643 aa9.53□□□□□ -0.88
GARNL3-205ENST00000435213 L1TD1Q5T7N2 865 aaKnown RBP9.52□□□□□ -0.89
GARNL3-205ENST00000435213 TDRD9Q8NDG6 1382 aaKnown RBP9.52□□□□□ -0.89
GARNL3-205ENST00000435213 POLR3GLQ9BT43 218 aa9.52□□□□□ -0.89
GARNL3-205ENST00000435213 RNF216Q9NWF9 866 aaPredicted RBP9.52□□□□□ -0.89
GARNL3-205ENST00000435213 TEX14Q8IWB6 1497 aa9.51□□□□□ -0.89
GARNL3-205ENST00000435213 UTP14CQ5TAP6 766 aaKnown RBP9.51□□□□□ -0.89
GARNL3-205ENST00000435213 FAM9BQ8IZU0 186 aa9.51□□□□□ -0.89
GARNL3-205ENST00000435213 ZNF830Q96NB3 372 aaPredicted RBP9.51□□□□□ -0.89
GARNL3-205ENST00000435213 RPRD2Q5VT52 1461 aaKnown RBP9.51□□□□□ -0.89
GARNL3-205ENST00000435213 CNPY4Q8N129 248 aa9.5□□□□□ -0.89
GARNL3-205ENST00000435213 DCAF11Q8TEB1 546 aa9.5□□□□□ -0.89
GARNL3-205ENST00000435213 DDRGK1Q96HY6 314 aa9.5□□□□□ -0.89
GARNL3-205ENST00000435213 TMEM51Q9NW97 253 aa9.5□□□□□ -0.89
GARNL3-205ENST00000435213 SPATA31E1Q6ZUB1 1445 aa9.5□□□□□ -0.89
GARNL3-205ENST00000435213 MAGI3Q5TCQ9 1506 aa9.5□□□□□ -0.89
GARNL3-205ENST00000435213 NFKBIBQ15653 356 aa9.49□□□□□ -0.89
GARNL3-205ENST00000435213 SHROOM2Q13796 1616 aa9.49□□□□□ -0.89
GARNL3-205ENST00000435213 IRX3P78415 501 aaPredicted RBP9.49□□□□□ -0.89
GARNL3-205ENST00000435213 NUDCQ9Y266 331 aa9.49□□□□□ -0.89
GARNL3-205ENST00000435213 MIA2Q96PC5 1412 aa9.49□□□□□ -0.89
GARNL3-205ENST00000435213 RAD54L2Q9Y4B4 1467 aa9.49□□□□□ -0.89
GARNL3-205ENST00000435213 CLGNO14967 610 aa9.48□□□□□ -0.89
GARNL3-205ENST00000435213 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.48□□□□□ -0.89
GARNL3-205ENST00000435213 ZHX1Q9UKY1 873 aaPredicted RBP9.47□□□□□ -0.89
GARNL3-205ENST00000435213 PTMSP20962 102 aa9.47□□□□□ -0.89
GARNL3-205ENST00000435213 L3MBTL2Q969R5 705 aa9.47□□□□□ -0.89
GARNL3-205ENST00000435213 KIF7Q2M1P5 1343 aa9.47□□□□□ -0.89
GARNL3-205ENST00000435213 TAF3Q5VWG9 929 aa9.47□□□□□ -0.89
GARNL3-205ENST00000435213 WWC1Q8IX03 1113 aa9.47□□□□□ -0.89
GARNL3-205ENST00000435213 RGS22Q8NE09 1264 aa9.47□□□□□ -0.89
GARNL3-205ENST00000435213 KIF14Q15058 1648 aa9.46□□□□□ -0.89
GARNL3-205ENST00000435213 PTMAP06454 111 aaKnown RBP9.46□□□□□ -0.9
GARNL3-205ENST00000435213 DNMT1P26358 1616 aaKnown RBP9.46□□□□□ -0.9
GARNL3-205ENST00000435213 FOXD1Q16676 465 aa9.46□□□□□ -0.9
GARNL3-205ENST00000435213 PPP4R3BQ5MIZ7 849 aa9.46□□□□□ -0.9
GARNL3-205ENST00000435213 MAGI1Q96QZ7 1491 aaPredicted RBP9.46□□□□□ -0.9
GARNL3-205ENST00000435213 MPHOSPH9Q99550 1183 aa9.46□□□□□ -0.9
GARNL3-205ENST00000435213 ANKRD30BQ9BXX2 1392 aa9.45□□□□□ -0.9
GARNL3-205ENST00000435213 MTERF4Q7Z6M4 381 aaKnown RBP9.45□□□□□ -0.9
GARNL3-205ENST00000435213 ROCK1Q13464 1354 aa9.45□□□□□ -0.9
GARNL3-205ENST00000435213 DHX29Q7Z478 1369 aaKnown RBP9.45□□□□□ -0.9
GARNL3-205ENST00000435213 ARID3CA6NKF2 412 aa9.45□□□□□ -0.9
GARNL3-205ENST00000435213 BCORL1Q5H9F3 1711 aa9.45□□□□□ -0.9
GARNL3-205ENST00000435213 RRP7BPQ9NSQ0 103 aa9.44□□□□□ -0.9
GARNL3-205ENST00000435213 MBD5Q9P267 1494 aa9.44□□□□□ -0.9
GARNL3-205ENST00000435213 CCDC9Q9Y3X0 531 aaKnown RBP9.44□□□□□ -0.9
GARNL3-205ENST00000435213 VGLL3A8MV65 326 aa9.44□□□□□ -0.9
GARNL3-205ENST00000435213 KIF20AO95235 890 aa9.44□□□□□ -0.9
GARNL3-205ENST00000435213 KDM5CP41229 1560 aa9.43□□□□□ -0.9
GARNL3-205ENST00000435213 GAPVD1Q14C86 1478 aa9.43□□□□□ -0.9
GARNL3-205ENST00000435213 DNTTIP2Q5QJE6 756 aaKnown RBP9.43□□□□□ -0.9
GARNL3-205ENST00000435213 DMTNQ08495 405 aa9.43□□□□□ -0.9
GARNL3-205ENST00000435213 ADGBQ8N7X0 1667 aa9.43□□□□□ -0.9
GARNL3-205ENST00000435213 NBPF8Q3BBV2 869 aa9.42□□□□□ -0.9
GARNL3-205ENST00000435213 TRIM44Q96DX7 344 aaPredicted RBP9.42□□□□□ -0.9
GARNL3-205ENST00000435213 EPRSP07814 1512 aaKnown RBP9.42□□□□□ -0.9
GARNL3-205ENST00000435213 TPRNQ4KMQ1 711 aa9.42□□□□□ -0.9
GARNL3-205ENST00000435213 FAM193AP78312 1265 aa9.41□□□□□ -0.9
GARNL3-205ENST00000435213 E9PCH4 1651 aa9.41□□□□□ -0.9
GARNL3-205ENST00000435213 ROCK2O75116 1388 aaKnown RBP9.41□□□□□ -0.9
GARNL3-205ENST00000435213 APPP05067 770 aa9.4□□□□□ -0.9
GARNL3-205ENST00000435213 DAPK1P53355 1430 aa9.4□□□□□ -0.9
GARNL3-205ENST00000435213 TCERG1O14776 1098 aaKnown RBP9.4□□□□□ -0.9
GARNL3-205ENST00000435213 AXDND1Q5T1B0 1012 aaPredicted RBP9.4□□□□□ -0.9
GARNL3-205ENST00000435213 TICAM2Q86XR7 235 aa9.4□□□□□ -0.91
GARNL3-205ENST00000435213 CHMP7Q8WUX9 453 aaPredicted RBP9.4□□□□□ -0.91
GARNL3-205ENST00000435213 CHIC2Q9UKJ5 165 aa9.4□□□□□ -0.91
GARNL3-205ENST00000435213 HMGB1P09429 215 aaKnown RBP9.39□□□□□ -0.91
GARNL3-205ENST00000435213 ZNF622Q969S3 477 aaKnown RBP eCLIP9.39□□□□□ -0.91
GARNL3-205ENST00000435213 KTN1Q86UP2 1357 aaKnown RBP9.39□□□□□ -0.91
GARNL3-205ENST00000435213 HDAC5Q9UQL6 1122 aa9.39□□□□□ -0.91
GARNL3-205ENST00000435213 CHD1O14646 1710 aa9.39□□□□□ -0.91
GARNL3-205ENST00000435213 PRDM10Q9NQV6 1147 aa9.39□□□□□ -0.91
GARNL3-205ENST00000435213 KCNG1Q9UIX4 513 aa9.39□□□□□ -0.91
GARNL3-205ENST00000435213 LRPPRCP42704 1394 aaKnown RBP9.39□□□□□ -0.91
GARNL3-205ENST00000435213 CLASP1Q7Z460 1538 aa9.38□□□□□ -0.91
GARNL3-205ENST00000435213 NUP160Q12769 1436 aa9.38□□□□□ -0.91
GARNL3-205ENST00000435213 ZNF608Q9ULD9 1512 aaPredicted RBP9.38□□□□□ -0.91
GARNL3-205ENST00000435213 CEP170Q5SW79 1584 aa9.38□□□□□ -0.91
GARNL3-205ENST00000435213 PATL2C9JE40 543 aaKnown RBP9.38□□□□□ -0.91
GARNL3-205ENST00000435213 MMP14P50281 582 aa9.38□□□□□ -0.91
GARNL3-205ENST00000435213 GTPBP4Q9BZE4 634 aaKnown RBP9.38□□□□□ -0.91
GARNL3-205ENST00000435213 LETM1O95202 739 aaPredicted RBP9.38□□□□□ -0.91
GARNL3-205ENST00000435213 MS4A1P11836 297 aa9.38□□□□□ -0.91
GARNL3-205ENST00000435213 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.38□□□□□ -0.91
GARNL3-205ENST00000435213 IQGAP2Q13576 1575 aa9.37□□□□□ -0.91
GARNL3-205ENST00000435213 CROCC2H7BZ55 1655 aa9.37□□□□□ -0.91
GARNL3-205ENST00000435213 USP47Q96K76 1375 aa9.37□□□□□ -0.91
GARNL3-205ENST00000435213 PZPP20742 1482 aa9.37□□□□□ -0.91
GARNL3-205ENST00000435213 CDK13Q14004 1512 aaKnown RBP9.37□□□□□ -0.91
GARNL3-205ENST00000435213 TERF1P54274 439 aa9.37□□□□□ -0.91
GARNL3-205ENST00000435213 PNISRQ8TF01 805 aaKnown RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms