RNA–Protein interactions for RNA: ENST00000435201.5

LIMK1-203, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-203ENST00000435201 BCORL1Q5H9F3 1711 aa23.19■■□□□ 1.3
LIMK1-203ENST00000435201 ATP10AO60312 1499 aa23.19■■□□□ 1.3
LIMK1-203ENST00000435201 PLA2R1Q13018 1463 aa23.17■■□□□ 1.3
LIMK1-203ENST00000435201 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.16■■□□□ 1.3
LIMK1-203ENST00000435201 SPAG9O60271 1321 aaKnown RBP23.16■■□□□ 1.3
LIMK1-203ENST00000435201 FANCAO15360 1455 aa23.15■■□□□ 1.3
LIMK1-203ENST00000435201 DCAF11Q8TEB1 546 aa23.15■■□□□ 1.3
LIMK1-203ENST00000435201 SUPT16HQ9Y5B9 1047 aaKnown RBP23.14■■□□□ 1.29
LIMK1-203ENST00000435201 CARD11Q9BXL7 1154 aa23.13■■□□□ 1.29
LIMK1-203ENST00000435201 PRKRIP1Q9H875 184 aaPredicted RBP23.13■■□□□ 1.29
LIMK1-203ENST00000435201 INO80Q9ULG1 1556 aaPredicted RBP23.13■■□□□ 1.29
LIMK1-203ENST00000435201 TRPM1Q7Z4N2 1603 aa23.13■■□□□ 1.29
LIMK1-203ENST00000435201 ASXL2Q76L83 1435 aa23.11■■□□□ 1.29
LIMK1-203ENST00000435201 PRAG1Q86YV5 1406 aa23.11■■□□□ 1.29
LIMK1-203ENST00000435201 DEPDC5O75140 1603 aa23.11■■□□□ 1.29
LIMK1-203ENST00000435201 ATP7AQ04656 1500 aa23.1■■□□□ 1.29
LIMK1-203ENST00000435201 ROCK2O75116 1388 aaKnown RBP23.1■■□□□ 1.29
LIMK1-203ENST00000435201 KDM2AQ9Y2K7 1162 aa23.1■■□□□ 1.29
LIMK1-203ENST00000435201 LAMC1P11047 1609 aa23.09■■□□□ 1.29
LIMK1-203ENST00000435201 EIF2AK4Q9P2K8 1649 aaKnown RBP23.09■■□□□ 1.29
LIMK1-203ENST00000435201 A2MP01023 1474 aa23.08■■□□□ 1.29
LIMK1-203ENST00000435201 OSCARQ8IYS5 282 aa23.08■■□□□ 1.29
LIMK1-203ENST00000435201 ADGRL1O94910 1474 aa23.07■■□□□ 1.28
LIMK1-203ENST00000435201 AFAP1Q8N556 730 aa23.07■■□□□ 1.28
LIMK1-203ENST00000435201 E9PCH4 1651 aa23.05■■□□□ 1.28
LIMK1-203ENST00000435201 DHX29Q7Z478 1369 aaKnown RBP23.03■■□□□ 1.28
LIMK1-203ENST00000435201 TET3O43151 1660 aa23.03■■□□□ 1.28
LIMK1-203ENST00000435201 GPRASP1Q5JY77 1395 aa23.03■■□□□ 1.28
LIMK1-203ENST00000435201 SCAPERQ9BY12 1400 aa23.02■■□□□ 1.28
LIMK1-203ENST00000435201 TRPM2O94759 1503 aa23.01■■□□□ 1.27
LIMK1-203ENST00000435201 HNRNPUQ00839 825 aaKnown RBP eCLIP23■■□□□ 1.27
LIMK1-203ENST00000435201 SPHKAPQ2M3C7 1700 aa23■■□□□ 1.27
LIMK1-203ENST00000435201 CFAP74Q9C0B2 1584 aa23■■□□□ 1.27
LIMK1-203ENST00000435201 VWDEQ8N2E2 1590 aa23■■□□□ 1.27
LIMK1-203ENST00000435201 NPM1P06748 294 aaKnown RBP eCLIP23■■□□□ 1.27
LIMK1-203ENST00000435201 ST20-MTHFSA0A0A6YYL1 179 aa22.99■■□□□ 1.27
LIMK1-203ENST00000435201 RGL3Q3MIN7 710 aa22.99■■□□□ 1.27
LIMK1-203ENST00000435201 PRDM15P57071 1507 aaPredicted RBP22.99■■□□□ 1.27
LIMK1-203ENST00000435201 CEP152O94986 1710 aa22.98■■□□□ 1.27
LIMK1-203ENST00000435201 KANK1Q14678 1352 aa22.98■■□□□ 1.27
LIMK1-203ENST00000435201 MRS2Q9HD23 443 aa22.97■■□□□ 1.27
LIMK1-203ENST00000435201 PTPRTO14522 1441 aa22.97■■□□□ 1.27
LIMK1-203ENST00000435201 POLR3GLQ9BT43 218 aa22.96■■□□□ 1.27
LIMK1-203ENST00000435201 RNF17Q9BXT8 1623 aaKnown RBP22.95■■□□□ 1.26
LIMK1-203ENST00000435201 CCDC184Q52MB2 194 aa22.95■■□□□ 1.26
LIMK1-203ENST00000435201 ZNF518AQ6AHZ1 1483 aa22.94■■□□□ 1.26
LIMK1-203ENST00000435201 NEFLP07196 543 aa22.94■■□□□ 1.26
LIMK1-203ENST00000435201 KIDINS220Q9ULH0 1771 aa22.93■■□□□ 1.26
LIMK1-203ENST00000435201 MROH1Q8NDA8 1641 aa22.92■■□□□ 1.26
LIMK1-203ENST00000435201 CLTCL1P53675 1640 aa22.91■■□□□ 1.26
LIMK1-203ENST00000435201 NEURL4Q96JN8 1562 aa22.91■■□□□ 1.26
LIMK1-203ENST00000435201 MADDQ8WXG6 1647 aa22.9■■□□□ 1.26
LIMK1-203ENST00000435201 STAC3Q96MF2 364 aa22.9■■□□□ 1.26
LIMK1-203ENST00000435201 NBPF1Q3BBV0 1214 aa22.89■■□□□ 1.25
LIMK1-203ENST00000435201 KTN1Q86UP2 1357 aaKnown RBP22.89■■□□□ 1.25
LIMK1-203ENST00000435201 MYT1LQ9UL68 1186 aa22.89■■□□□ 1.25
LIMK1-203ENST00000435201 FKBP8Q14318 412 aa22.88■■□□□ 1.25
LIMK1-203ENST00000435201 CD109Q6YHK3 1445 aa22.88■■□□□ 1.25
LIMK1-203ENST00000435201 COL17A1Q9UMD9 1497 aaPredicted RBP22.87■■□□□ 1.25
LIMK1-203ENST00000435201 KIF3BO15066 747 aa22.87■■□□□ 1.25
LIMK1-203ENST00000435201 FAM9BQ8IZU0 186 aa22.87■■□□□ 1.25
LIMK1-203ENST00000435201 POGZQ7Z3K3 1410 aa22.85■■□□□ 1.25
LIMK1-203ENST00000435201 EFCAB6Q5THR3 1501 aa22.84■■□□□ 1.25
LIMK1-203ENST00000435201 ZBED9Q6R2W3 1325 aa22.84■■□□□ 1.25
LIMK1-203ENST00000435201 LMTK2Q8IWU2 1503 aa22.84■■□□□ 1.25
LIMK1-203ENST00000435201 MLH3Q9UHC1 1453 aa22.82■■□□□ 1.24
LIMK1-203ENST00000435201 HECW2Q9P2P5 1572 aa22.82■■□□□ 1.24
LIMK1-203ENST00000435201 IQGAP1P46940 1657 aa22.82■■□□□ 1.24
LIMK1-203ENST00000435201 KIAA1210Q9ULL0 1709 aa22.8■■□□□ 1.24
LIMK1-203ENST00000435201 RALBP1Q15311 655 aa22.79■■□□□ 1.24
LIMK1-203ENST00000435201 TESK2Q96S53 571 aa22.79■■□□□ 1.24
LIMK1-203ENST00000435201 NEO1Q92859 1461 aa22.79■■□□□ 1.24
LIMK1-203ENST00000435201 PPRC1Q5VV67 1664 aaKnown RBP22.79■■□□□ 1.24
LIMK1-203ENST00000435201 KIF1BO60333 1816 aa22.78■■□□□ 1.24
LIMK1-203ENST00000435201 DISP3Q9P2K9 1392 aa22.76■■□□□ 1.23
LIMK1-203ENST00000435201 TMF1P82094 1093 aa22.75■■□□□ 1.23
LIMK1-203ENST00000435201 MYBBP1AQ9BQG0 1328 aaKnown RBP22.75■■□□□ 1.23
LIMK1-203ENST00000435201 FRMPD1Q5SYB0 1578 aa22.75■■□□□ 1.23
LIMK1-203ENST00000435201 BRD4O60885 1362 aaPredicted RBP22.75■■□□□ 1.23
LIMK1-203ENST00000435201 MYOM2P54296 1465 aa22.74■■□□□ 1.23
LIMK1-203ENST00000435201 SCAF11Q99590 1463 aaKnown RBP22.73■■□□□ 1.23
LIMK1-203ENST00000435201 WASHC2CQ9Y4E1 1318 aa22.73■■□□□ 1.23
LIMK1-203ENST00000435201 ABCA6Q8N139 1617 aa22.72■■□□□ 1.23
LIMK1-203ENST00000435201 CNGB1Q14028 1251 aaPredicted RBP22.72■■□□□ 1.23
LIMK1-203ENST00000435201 BCANQ96GW7 911 aa22.72■■□□□ 1.23
LIMK1-203ENST00000435201 MAP3K4Q9Y6R4 1608 aa22.72■■□□□ 1.23
LIMK1-203ENST00000435201 IFT172Q9UG01 1749 aa22.72■■□□□ 1.23
LIMK1-203ENST00000435201 TMC1Q8TDI8 760 aa22.71■■□□□ 1.23
LIMK1-203ENST00000435201 PARD3Q8TEW0 1356 aa22.71■■□□□ 1.23
LIMK1-203ENST00000435201 PNISRQ8TF01 805 aaKnown RBP22.7■■□□□ 1.22
LIMK1-203ENST00000435201 UGGT1Q9NYU2 1555 aa22.7■■□□□ 1.22
LIMK1-203ENST00000435201 EIF3AQ14152 1382 aaKnown RBP22.67■■□□□ 1.22
LIMK1-203ENST00000435201 MROH2AA6NES4 1674 aa22.67■■□□□ 1.22
LIMK1-203ENST00000435201 PER1O15534 1290 aaPredicted RBP22.67■■□□□ 1.22
LIMK1-203ENST00000435201 LRPPRCP42704 1394 aaKnown RBP22.66■■□□□ 1.22
LIMK1-203ENST00000435201 ADGRB3O60242 1522 aa22.66■■□□□ 1.22
LIMK1-203ENST00000435201 ERICH6BQ5W0A0 696 aa22.64■■□□□ 1.22
LIMK1-203ENST00000435201 CDCA8Q53HL2 280 aa22.64■■□□□ 1.21
LIMK1-203ENST00000435201 NLRP13Q86W25 1043 aa22.64■■□□□ 1.21
LIMK1-203ENST00000435201 GLI2P10070 1586 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms