RNA–Protein interactions for RNA: ENST00000435149.1

NCSTN-206, Transcript of nicastrin, humanhuman

TSL 3

Gene NCSTN, Length 824 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-206ENST00000435149 KIDINS220Q9ULH0 1771 aa14.02□□□□□ -0.16
NCSTN-206ENST00000435149 CDK12Q9NYV4 1490 aaPredicted RBP14.02□□□□□ -0.16
NCSTN-206ENST00000435149 IFFO2Q5TF58 517 aa14.02□□□□□ -0.17
NCSTN-206ENST00000435149 DEPDC5O75140 1603 aa14.01□□□□□ -0.17
NCSTN-206ENST00000435149 SETBP1Q9Y6X0 1596 aa14.01□□□□□ -0.17
NCSTN-206ENST00000435149 PRXQ9BXM0 1461 aa14.01□□□□□ -0.17
NCSTN-206ENST00000435149 IQGAP1P46940 1657 aa14.01□□□□□ -0.17
NCSTN-206ENST00000435149 CDK13Q14004 1512 aaKnown RBP14□□□□□ -0.17
NCSTN-206ENST00000435149 RBM33Q96EV2 1170 aaKnown RBP14□□□□□ -0.17
NCSTN-206ENST00000435149 ABCC1P33527 1531 aa14□□□□□ -0.17
NCSTN-206ENST00000435149 JCADQ9P266 1359 aa13.99□□□□□ -0.17
NCSTN-206ENST00000435149 THEMISQ8N1K5 641 aaPredicted RBP13.98□□□□□ -0.17
NCSTN-206ENST00000435149 ROBO1Q9Y6N7 1651 aa13.98□□□□□ -0.17
NCSTN-206ENST00000435149 TNRQ92752 1358 aa13.96□□□□□ -0.17
NCSTN-206ENST00000435149 ITSN2Q9NZM3 1697 aa13.96□□□□□ -0.17
NCSTN-206ENST00000435149 MEX3CQ5U5Q3 659 aaKnown RBP13.96□□□□□ -0.17
NCSTN-206ENST00000435149 U3KPZ7 1027 aaPredicted RBP13.96□□□□□ -0.17
NCSTN-206ENST00000435149 LRP6O75581 1613 aa13.95□□□□□ -0.18
NCSTN-206ENST00000435149 GGT6Q6P531 493 aa13.95□□□□□ -0.18
NCSTN-206ENST00000435149 XIRP1Q702N8 1843 aaKnown RBP13.94□□□□□ -0.18
NCSTN-206ENST00000435149 KIF14Q15058 1648 aa13.93□□□□□ -0.18
NCSTN-206ENST00000435149 FAM135AQ9P2D6 1515 aa13.92□□□□□ -0.18
NCSTN-206ENST00000435149 UGGT1Q9NYU2 1555 aa13.92□□□□□ -0.18
NCSTN-206ENST00000435149 SPATA31A6Q5VVP1 1343 aa13.91□□□□□ -0.18
NCSTN-206ENST00000435149 FBXO31Q5XUX0 539 aaPredicted RBP13.91□□□□□ -0.18
NCSTN-206ENST00000435149 PLXNC1O60486 1568 aa13.91□□□□□ -0.18
NCSTN-206ENST00000435149 KDM5DQ9BY66 1539 aa13.9□□□□□ -0.18
NCSTN-206ENST00000435149 PHLPP1O60346 1717 aa13.9□□□□□ -0.18
NCSTN-206ENST00000435149 CDC42BPBQ9Y5S2 1711 aa13.89□□□□□ -0.19
NCSTN-206ENST00000435149 RGS12O14924 1447 aa13.89□□□□□ -0.19
NCSTN-206ENST00000435149 NUTM2BA6NNL0 878 aaPredicted RBP13.88□□□□□ -0.19
NCSTN-206ENST00000435149 NUTM2EB1AL46 878 aaPredicted RBP13.88□□□□□ -0.19
NCSTN-206ENST00000435149 NUTM2DQ5VT03 806 aaPredicted RBP13.88□□□□□ -0.19
NCSTN-206ENST00000435149 NUTM2AQ8IVF1 878 aaPredicted RBP13.88□□□□□ -0.19
NCSTN-206ENST00000435149 SAMD9LQ8IVG5 1584 aa13.88□□□□□ -0.19
NCSTN-206ENST00000435149 LRRC9Q6ZRR7 1453 aa13.87□□□□□ -0.19
NCSTN-206ENST00000435149 NLRP1Q9C000 1473 aa13.87□□□□□ -0.19
NCSTN-206ENST00000435149 RANGAP1P46060 587 aaPredicted RBP13.87□□□□□ -0.19
NCSTN-206ENST00000435149 CDK11AQ9UQ88 783 aaPredicted RBP13.87□□□□□ -0.19
NCSTN-206ENST00000435149 ZC3H13Q5T200 1668 aaKnown RBP13.87□□□□□ -0.19
NCSTN-206ENST00000435149 A2MP01023 1474 aa13.87□□□□□ -0.19
NCSTN-206ENST00000435149 PZPP20742 1482 aa13.85□□□□□ -0.19
NCSTN-206ENST00000435149 SPAG9O60271 1321 aaKnown RBP13.85□□□□□ -0.19
NCSTN-206ENST00000435149 ATP7AQ04656 1500 aa13.85□□□□□ -0.19
NCSTN-206ENST00000435149 ATAD2Q6PL18 1390 aa13.84□□□□□ -0.19
NCSTN-206ENST00000435149 FGD6Q6ZV73 1430 aa13.84□□□□□ -0.19
NCSTN-206ENST00000435149 MIA2Q96PC5 1412 aa13.84□□□□□ -0.19
NCSTN-206ENST00000435149 CAPN15O75808 1086 aa13.84□□□□□ -0.19
NCSTN-206ENST00000435149 TMEM94Q12767 1356 aa13.83□□□□□ -0.19
NCSTN-206ENST00000435149 COL16A1Q07092 1604 aaPredicted RBP13.83□□□□□ -0.2
NCSTN-206ENST00000435149 TROQ12816 1431 aaPredicted RBP13.83□□□□□ -0.2
NCSTN-206ENST00000435149 APLP2Q06481 763 aa13.83□□□□□ -0.2
NCSTN-206ENST00000435149 LRP5O75197 1615 aa13.82□□□□□ -0.2
NCSTN-206ENST00000435149 SLC4A2P04920 1241 aa13.82□□□□□ -0.2
NCSTN-206ENST00000435149 PREX2Q70Z35 1606 aa13.82□□□□□ -0.2
NCSTN-206ENST00000435149 CLIP1P30622 1438 aa13.81□□□□□ -0.2
NCSTN-206ENST00000435149 RBM6P78332 1123 aaKnown RBP13.81□□□□□ -0.2
NCSTN-206ENST00000435149 AFF2P51816 1311 aa13.81□□□□□ -0.2
NCSTN-206ENST00000435149 MAP3K1Q13233 1512 aa13.8□□□□□ -0.2
NCSTN-206ENST00000435149 SLAIN2Q9P270 581 aa13.78□□□□□ -0.2
NCSTN-206ENST00000435149 ATP1B4Q9UN42 357 aaPredicted RBP13.78□□□□□ -0.2
NCSTN-206ENST00000435149 SCAF11Q99590 1463 aaKnown RBP13.77□□□□□ -0.21
NCSTN-206ENST00000435149 SHPRHQ149N8 1683 aa13.76□□□□□ -0.21
NCSTN-206ENST00000435149 INO80Q9ULG1 1556 aaPredicted RBP13.76□□□□□ -0.21
NCSTN-206ENST00000435149 YY1P25490 414 aa13.76□□□□□ -0.21
NCSTN-206ENST00000435149 QTRT2Q9H974 415 aaKnown RBP13.76□□□□□ -0.21
NCSTN-206ENST00000435149 CCDC125Q86Z20 511 aa13.75□□□□□ -0.21
NCSTN-206ENST00000435149 SYCP2Q9BX26 1530 aa13.74□□□□□ -0.21
NCSTN-206ENST00000435149 HNRNPMP52272 730 aaKnown RBP eCLIP13.73□□□□□ -0.21
NCSTN-206ENST00000435149 PROSER2Q86WR7 435 aaPredicted RBP13.73□□□□□ -0.21
NCSTN-206ENST00000435149 SPINK5Q9NQ38 1064 aaPredicted RBP13.73□□□□□ -0.21
NCSTN-206ENST00000435149 MSH6P52701 1360 aa13.72□□□□□ -0.21
NCSTN-206ENST00000435149 LTKP29376 864 aa13.72□□□□□ -0.21
NCSTN-206ENST00000435149 NGLY1Q96IV0 654 aa13.72□□□□□ -0.21
NCSTN-206ENST00000435149 ZNF777Q9ULD5 760 aaPredicted RBP13.72□□□□□ -0.21
NCSTN-206ENST00000435149 ADGBQ8N7X0 1667 aa13.72□□□□□ -0.21
NCSTN-206ENST00000435149 WASHC2CQ9Y4E1 1318 aa13.71□□□□□ -0.21
NCSTN-206ENST00000435149 KCNA6P17658 529 aa13.71□□□□□ -0.21
NCSTN-206ENST00000435149 TXNDC2Q86VQ3 553 aa13.71□□□□□ -0.21
NCSTN-206ENST00000435149 SLC4A1APQ9BWU0 796 aaKnown RBP13.71□□□□□ -0.21
NCSTN-206ENST00000435149 PRDM15P57071 1507 aaPredicted RBP13.7□□□□□ -0.22
NCSTN-206ENST00000435149 TIAM1Q13009 1591 aa13.7□□□□□ -0.22
NCSTN-206ENST00000435149 EP400Q96L91 3159 aa13.69□□□□□ -0.22
NCSTN-206ENST00000435149 NWD1Q149M9 1564 aa13.68□□□□□ -0.22
NCSTN-206ENST00000435149 ABCC3O15438 1527 aa13.68□□□□□ -0.22
NCSTN-206ENST00000435149 AHDC1Q5TGY3 1603 aaPredicted RBP13.68□□□□□ -0.22
NCSTN-206ENST00000435149 ARHGAP23Q9P227 1491 aa13.67□□□□□ -0.22
NCSTN-206ENST00000435149 CDC42BPAQ5VT25 1732 aa13.67□□□□□ -0.22
NCSTN-206ENST00000435149 SAMD1Q6SPF0 538 aaPredicted RBP13.67□□□□□ -0.22
NCSTN-206ENST00000435149 C8orf37Q96NL8 207 aa13.67□□□□□ -0.22
NCSTN-206ENST00000435149 KIAA1107Q9UPP5 1409 aa13.66□□□□□ -0.22
NCSTN-206ENST00000435149 SLIT1O75093 1534 aa13.66□□□□□ -0.22
NCSTN-206ENST00000435149 NHSL1Q5SYE7 1610 aa13.66□□□□□ -0.22
NCSTN-206ENST00000435149 KIF3BO15066 747 aa13.66□□□□□ -0.22
NCSTN-206ENST00000435149 DHX29Q7Z478 1369 aaKnown RBP13.66□□□□□ -0.22
NCSTN-206ENST00000435149 NCOA2Q15596 1464 aa13.66□□□□□ -0.22
NCSTN-206ENST00000435149 FMN1Q68DA7 1419 aa13.65□□□□□ -0.22
NCSTN-206ENST00000435149 UBR1Q8IWV7 1749 aa13.65□□□□□ -0.22
NCSTN-206ENST00000435149 EID1Q9Y6B2 187 aa13.65□□□□□ -0.22
NCSTN-206ENST00000435149 NKTRP30414 1462 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms