RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 FYCO1Q9BQS8 1478 aa9.51□□□□□ -0.89
CPSF6-202ENST00000435070 ZBTB7CA1YPR0 619 aa9.51□□□□□ -0.89
CPSF6-202ENST00000435070 ZHX1Q9UKY1 873 aaPredicted RBP9.51□□□□□ -0.89
CPSF6-202ENST00000435070 PKD2Q13563 968 aa9.51□□□□□ -0.89
CPSF6-202ENST00000435070 CCDC146Q8IYE0 955 aa9.5□□□□□ -0.89
CPSF6-202ENST00000435070 COG6Q9Y2V7 657 aa9.5□□□□□ -0.89
CPSF6-202ENST00000435070 ZNF644Q9H582 1327 aaPredicted RBP9.5□□□□□ -0.89
CPSF6-202ENST00000435070 MIA2Q96PC5 1412 aa9.5□□□□□ -0.89
CPSF6-202ENST00000435070 TEX14Q8IWB6 1497 aa9.5□□□□□ -0.89
CPSF6-202ENST00000435070 TPM2P07951 284 aa9.5□□□□□ -0.89
CPSF6-202ENST00000435070 AAMPQ13685 434 aa9.49□□□□□ -0.89
CPSF6-202ENST00000435070 BCORL1Q5H9F3 1711 aa9.49□□□□□ -0.89
CPSF6-202ENST00000435070 ROCK2O75116 1388 aaKnown RBP9.49□□□□□ -0.89
CPSF6-202ENST00000435070 DUSP27Q5VZP5 1158 aa9.49□□□□□ -0.89
CPSF6-202ENST00000435070 WDR43Q15061 677 aaKnown RBP eCLIP9.49□□□□□ -0.89
CPSF6-202ENST00000435070 FGD5Q6ZNL6 1462 aa9.49□□□□□ -0.89
CPSF6-202ENST00000435070 GAS2L3Q86XJ1 694 aa9.49□□□□□ -0.89
CPSF6-202ENST00000435070 PANK1Q8TE04 598 aa9.49□□□□□ -0.89
CPSF6-202ENST00000435070 R3HCC1Q9Y3T6 440 aaKnown RBP9.49□□□□□ -0.89
CPSF6-202ENST00000435070 GOLGA2Q08379 1002 aa9.48□□□□□ -0.89
CPSF6-202ENST00000435070 FOXD4L1Q9NU39 408 aa9.48□□□□□ -0.89
CPSF6-202ENST00000435070 PRDM4Q9UKN5 801 aa9.48□□□□□ -0.89
CPSF6-202ENST00000435070 MFAP1P55081 439 aaKnown RBP9.48□□□□□ -0.89
CPSF6-202ENST00000435070 CALD1Q05682 793 aaKnown RBP9.47□□□□□ -0.89
CPSF6-202ENST00000435070 ZNF777Q9ULD5 760 aaPredicted RBP9.47□□□□□ -0.89
CPSF6-202ENST00000435070 PANK3Q9H999 370 aa9.47□□□□□ -0.89
CPSF6-202ENST00000435070 CHMP5Q9NZZ3 219 aa9.47□□□□□ -0.89
CPSF6-202ENST00000435070 RGL3Q3MIN7 710 aa9.46□□□□□ -0.89
CPSF6-202ENST00000435070 TNNT2P45379 298 aaPredicted RBP9.46□□□□□ -0.9
CPSF6-202ENST00000435070 SPINK5Q9NQ38 1064 aaPredicted RBP9.46□□□□□ -0.9
CPSF6-202ENST00000435070 PLEKHH1Q9ULM0 1364 aa9.45□□□□□ -0.9
CPSF6-202ENST00000435070 CDK11BP21127 795 aaKnown RBP9.45□□□□□ -0.9
CPSF6-202ENST00000435070 MSNP26038 577 aaKnown RBP9.45□□□□□ -0.9
CPSF6-202ENST00000435070 RIPK4P57078 832 aa9.45□□□□□ -0.9
CPSF6-202ENST00000435070 TBC1D32Q96NH3 1257 aa9.45□□□□□ -0.9
CPSF6-202ENST00000435070 CLUAP1Q96AJ1 413 aa9.44□□□□□ -0.9
CPSF6-202ENST00000435070 ESF1Q9H501 851 aaKnown RBP9.44□□□□□ -0.9
CPSF6-202ENST00000435070 ABCA5Q8WWZ7 1642 aa9.44□□□□□ -0.9
CPSF6-202ENST00000435070 BCL2L13Q9BXK5 485 aa9.44□□□□□ -0.9
CPSF6-202ENST00000435070 MAPK8IP3Q9UPT6 1336 aa9.44□□□□□ -0.9
CPSF6-202ENST00000435070 UNC13AQ9UPW8 1703 aa9.43□□□□□ -0.9
CPSF6-202ENST00000435070 NEUROD2Q15784 382 aa9.43□□□□□ -0.9
CPSF6-202ENST00000435070 APAF1O14727 1248 aa9.43□□□□□ -0.9
CPSF6-202ENST00000435070 ANP32BQ92688 251 aaKnown RBP9.43□□□□□ -0.9
CPSF6-202ENST00000435070 PER1O15534 1290 aaPredicted RBP9.43□□□□□ -0.9
CPSF6-202ENST00000435070 FGD1P98174 961 aa9.43□□□□□ -0.9
CPSF6-202ENST00000435070 XPCQ01831 940 aaPredicted RBP9.42□□□□□ -0.9
CPSF6-202ENST00000435070 NBPF1Q3BBV0 1214 aa9.42□□□□□ -0.9
CPSF6-202ENST00000435070 HECW1Q76N89 1606 aa9.42□□□□□ -0.9
CPSF6-202ENST00000435070 PDZRN3Q9UPQ7 1066 aa9.42□□□□□ -0.9
CPSF6-202ENST00000435070 NCLP19338 710 aaKnown RBP9.42□□□□□ -0.9
CPSF6-202ENST00000435070 PARD3Q8TEW0 1356 aa9.42□□□□□ -0.9
CPSF6-202ENST00000435070 HSCBQ8IWL3 235 aa9.42□□□□□ -0.9
CPSF6-202ENST00000435070 C22orf23Q9BZE7 217 aa9.42□□□□□ -0.9
CPSF6-202ENST00000435070 DDX11L8A8MPP1 907 aa9.41□□□□□ -0.9
CPSF6-202ENST00000435070 TNNQ9UQP3 1299 aa9.41□□□□□ -0.9
CPSF6-202ENST00000435070 NASPP49321 788 aaPredicted RBP9.41□□□□□ -0.9
CPSF6-202ENST00000435070 SLFN5Q08AF3 891 aa9.41□□□□□ -0.9
CPSF6-202ENST00000435070 ZSCAN30Q86W11 494 aa9.41□□□□□ -0.9
CPSF6-202ENST00000435070 STAG3Q9UJ98 1225 aa9.41□□□□□ -0.9
CPSF6-202ENST00000435070 AMER1Q5JTC6 1135 aaPredicted RBP9.41□□□□□ -0.9
CPSF6-202ENST00000435070 UQCRHLA0A096LP55 91 aa9.4□□□□□ -0.9
CPSF6-202ENST00000435070 UQCRHP07919 91 aa9.4□□□□□ -0.9
CPSF6-202ENST00000435070 DMRT2Q9Y5R5 561 aa9.4□□□□□ -0.9
CPSF6-202ENST00000435070 OFD1O75665 1012 aa9.4□□□□□ -0.91
CPSF6-202ENST00000435070 TNPO1Q92973 898 aaKnown RBP9.4□□□□□ -0.91
CPSF6-202ENST00000435070 A0A0G2JS52 829 aa9.4□□□□□ -0.91
CPSF6-202ENST00000435070 PDE4CQ08493 712 aa9.4□□□□□ -0.91
CPSF6-202ENST00000435070 PCDHB15Q9Y5E8 787 aa9.4□□□□□ -0.91
CPSF6-202ENST00000435070 CENPJQ9HC77 1338 aaPredicted RBP9.39□□□□□ -0.91
CPSF6-202ENST00000435070 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.39□□□□□ -0.91
CPSF6-202ENST00000435070 HSP90AB1P08238 724 aaKnown RBP9.39□□□□□ -0.91
CPSF6-202ENST00000435070 SNAPC4Q5SXM2 1469 aa9.39□□□□□ -0.91
CPSF6-202ENST00000435070 CHGAP10645 457 aaKnown RBP9.38□□□□□ -0.91
CPSF6-202ENST00000435070 CGNL1Q0VF96 1302 aa9.38□□□□□ -0.91
CPSF6-202ENST00000435070 BICRAQ9NZM4 1560 aa9.38□□□□□ -0.91
CPSF6-202ENST00000435070 RAD54L2Q9Y4B4 1467 aa9.37□□□□□ -0.91
CPSF6-202ENST00000435070 EFCAB5A4FU69 1503 aa9.37□□□□□ -0.91
CPSF6-202ENST00000435070 BBXQ8WY36 941 aaPredicted RBP9.37□□□□□ -0.91
CPSF6-202ENST00000435070 KNSTRNQ9Y448 316 aa9.37□□□□□ -0.91
CPSF6-202ENST00000435070 DDX49Q9Y6V7 483 aaKnown RBP9.37□□□□□ -0.91
CPSF6-202ENST00000435070 CCDC173Q0VFZ6 552 aa9.37□□□□□ -0.91
CPSF6-202ENST00000435070 MPNDQ8N594 471 aa9.37□□□□□ -0.91
CPSF6-202ENST00000435070 GBP4Q96PP9 640 aa9.37□□□□□ -0.91
CPSF6-202ENST00000435070 SUPT6HQ7KZ85 1726 aaKnown RBP9.37□□□□□ -0.91
CPSF6-202ENST00000435070 PPP2R1AP30153 589 aa9.36□□□□□ -0.91
CPSF6-202ENST00000435070 JARID2Q92833 1246 aaPredicted RBP9.36□□□□□ -0.91
CPSF6-202ENST00000435070 TSC1Q92574 1164 aa9.36□□□□□ -0.91
CPSF6-202ENST00000435070 RRP7AQ9Y3A4 280 aaKnown RBP9.36□□□□□ -0.91
CPSF6-202ENST00000435070 BLMP54132 1417 aaPredicted RBP9.36□□□□□ -0.91
CPSF6-202ENST00000435070 EIF3AQ14152 1382 aaKnown RBP9.36□□□□□ -0.91
CPSF6-202ENST00000435070 MAGI3Q5TCQ9 1506 aa9.36□□□□□ -0.91
CPSF6-202ENST00000435070 KDM5CP41229 1560 aa9.35□□□□□ -0.91
CPSF6-202ENST00000435070 RLBP1P12271 317 aa9.35□□□□□ -0.91
CPSF6-202ENST00000435070 POLR1AO95602 1720 aaPredicted RBP9.35□□□□□ -0.91
CPSF6-202ENST00000435070 UGGT2Q9NYU1 1516 aa9.35□□□□□ -0.91
CPSF6-202ENST00000435070 NLRP1Q9C000 1473 aa9.35□□□□□ -0.91
CPSF6-202ENST00000435070 NUP155O75694 1391 aa9.35□□□□□ -0.91
CPSF6-202ENST00000435070 MAP7D2Q96T17 732 aa9.35□□□□□ -0.91
CPSF6-202ENST00000435070 DNTTIP2Q5QJE6 756 aaKnown RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms