RNA–Protein interactions for RNA: ENST00000435039.3

PCOTH-203, Transcript of Pro-X-Gly collagen triple helix like repeat containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCOTH, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOTH-203ENST00000435039 AFAP1Q8N556 730 aa16.79■□□□□ 0.28
PCOTH-203ENST00000435039 DIP2CQ9Y2E4 1556 aa16.79■□□□□ 0.28
PCOTH-203ENST00000435039 ARID4BQ4LE39 1312 aaPredicted RBP16.77■□□□□ 0.28
PCOTH-203ENST00000435039 RIMS1Q86UR5 1692 aaKnown RBP16.77■□□□□ 0.28
PCOTH-203ENST00000435039 SIGLEC1Q9BZZ2 1709 aa16.76■□□□□ 0.27
PCOTH-203ENST00000435039 IQGAP3Q86VI3 1631 aa16.75■□□□□ 0.27
PCOTH-203ENST00000435039 RNF17Q9BXT8 1623 aaKnown RBP16.74■□□□□ 0.27
PCOTH-203ENST00000435039 REREQ9P2R6 1566 aa16.74■□□□□ 0.27
PCOTH-203ENST00000435039 A2MP01023 1474 aa16.73■□□□□ 0.27
PCOTH-203ENST00000435039 PZPP20742 1482 aa16.73■□□□□ 0.27
PCOTH-203ENST00000435039 PRDM15P57071 1507 aaPredicted RBP16.73■□□□□ 0.27
PCOTH-203ENST00000435039 ZEB1P37275 1124 aaPredicted RBP16.72■□□□□ 0.27
PCOTH-203ENST00000435039 LMTK3Q96Q04 1460 aa16.72■□□□□ 0.27
PCOTH-203ENST00000435039 YEATS2Q9ULM3 1422 aa16.71■□□□□ 0.27
PCOTH-203ENST00000435039 DHX29Q7Z478 1369 aaKnown RBP16.71■□□□□ 0.27
PCOTH-203ENST00000435039 MROH1Q8NDA8 1641 aa16.7■□□□□ 0.26
PCOTH-203ENST00000435039 FAM135AQ9P2D6 1515 aa16.7■□□□□ 0.26
PCOTH-203ENST00000435039 VWDEQ8N2E2 1590 aa16.68■□□□□ 0.26
PCOTH-203ENST00000435039 FER1L4A9Z1Z3 1794 aa16.67■□□□□ 0.26
PCOTH-203ENST00000435039 TRIM52Q96A61 297 aa16.66■□□□□ 0.26
PCOTH-203ENST00000435039 MYT1LQ9UL68 1186 aa16.65■□□□□ 0.26
PCOTH-203ENST00000435039 NUP155O75694 1391 aa16.64■□□□□ 0.26
PCOTH-203ENST00000435039 TET3O43151 1660 aa16.64■□□□□ 0.25
PCOTH-203ENST00000435039 ZC3H13Q5T200 1668 aaKnown RBP16.64■□□□□ 0.25
PCOTH-203ENST00000435039 AGLP35573 1532 aa16.64■□□□□ 0.25
PCOTH-203ENST00000435039 ATP10AO60312 1499 aa16.63■□□□□ 0.25
PCOTH-203ENST00000435039 LMTK2Q8IWU2 1503 aa16.62■□□□□ 0.25
PCOTH-203ENST00000435039 FBXO41Q8TF61 875 aa16.62■□□□□ 0.25
PCOTH-203ENST00000435039 MPHOSPH9Q99550 1183 aa16.62■□□□□ 0.25
PCOTH-203ENST00000435039 SLC4A1APQ9BWU0 796 aaKnown RBP16.6■□□□□ 0.25
PCOTH-203ENST00000435039 EFCAB6Q5THR3 1501 aa16.6■□□□□ 0.25
PCOTH-203ENST00000435039 CEP152O94986 1710 aa16.59■□□□□ 0.25
PCOTH-203ENST00000435039 MLECQ14165 292 aa16.59■□□□□ 0.25
PCOTH-203ENST00000435039 KANK1Q14678 1352 aa16.59■□□□□ 0.25
PCOTH-203ENST00000435039 HSPA2P54652 639 aa16.58■□□□□ 0.24
PCOTH-203ENST00000435039 PLPPR3Q6T4P5 718 aa16.58■□□□□ 0.24
PCOTH-203ENST00000435039 E9PCH4 1651 aa16.57■□□□□ 0.24
PCOTH-203ENST00000435039 ABCC3O15438 1527 aa16.56■□□□□ 0.24
PCOTH-203ENST00000435039 ANKRD30BQ9BXX2 1392 aa16.56■□□□□ 0.24
PCOTH-203ENST00000435039 KIF3BO15066 747 aa16.55■□□□□ 0.24
PCOTH-203ENST00000435039 SPHKAPQ2M3C7 1700 aa16.55■□□□□ 0.24
PCOTH-203ENST00000435039 PREX1Q8TCU6 1659 aa16.55■□□□□ 0.24
PCOTH-203ENST00000435039 CAMSAP1Q5T5Y3 1602 aa16.55■□□□□ 0.24
PCOTH-203ENST00000435039 RPRD2Q5VT52 1461 aaKnown RBP16.53■□□□□ 0.24
PCOTH-203ENST00000435039 TRPM2O94759 1503 aa16.52■□□□□ 0.24
PCOTH-203ENST00000435039 PKD2Q13563 968 aa16.52■□□□□ 0.24
PCOTH-203ENST00000435039 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.51■□□□□ 0.23
PCOTH-203ENST00000435039 SETD1BQ9UPS6 1966 aaKnown RBP16.5■□□□□ 0.23
PCOTH-203ENST00000435039 TIMELESSQ9UNS1 1208 aa16.49■□□□□ 0.23
PCOTH-203ENST00000435039 CEBPAP49715 358 aaPredicted RBP16.48■□□□□ 0.23
PCOTH-203ENST00000435039 PTPRTO14522 1441 aa16.47■□□□□ 0.23
PCOTH-203ENST00000435039 FOXD1Q16676 465 aa16.47■□□□□ 0.23
PCOTH-203ENST00000435039 C3P01024 1663 aa16.46■□□□□ 0.23
PCOTH-203ENST00000435039 STRCQ7RTU9 1775 aa16.46■□□□□ 0.23
PCOTH-203ENST00000435039 ARHGAP31Q2M1Z3 1444 aa16.46■□□□□ 0.23
PCOTH-203ENST00000435039 TONSLQ96HA7 1378 aa16.46■□□□□ 0.23
PCOTH-203ENST00000435039 PLA2R1Q13018 1463 aa16.46■□□□□ 0.23
PCOTH-203ENST00000435039 SIN3AQ96ST3 1273 aa16.45■□□□□ 0.22
PCOTH-203ENST00000435039 CCDC144AA2RUR9 1427 aa16.45■□□□□ 0.22
PCOTH-203ENST00000435039 CLTCQ00610 1675 aaKnown RBP16.44■□□□□ 0.22
PCOTH-203ENST00000435039 NPATQ14207 1427 aa16.44■□□□□ 0.22
PCOTH-203ENST00000435039 MROH2AA6NES4 1674 aa16.43■□□□□ 0.22
PCOTH-203ENST00000435039 NEURL4Q96JN8 1562 aa16.43■□□□□ 0.22
PCOTH-203ENST00000435039 GGT6Q6P531 493 aa16.43■□□□□ 0.22
PCOTH-203ENST00000435039 PPP6R1Q9UPN7 881 aa16.43■□□□□ 0.22
PCOTH-203ENST00000435039 CLTCL1P53675 1640 aa16.43■□□□□ 0.22
PCOTH-203ENST00000435039 CNTLNQ9NXG0 1405 aa16.42■□□□□ 0.22
PCOTH-203ENST00000435039 NEUROD1Q13562 356 aa16.41■□□□□ 0.22
PCOTH-203ENST00000435039 CERKQ8TCT0 537 aa16.41■□□□□ 0.22
PCOTH-203ENST00000435039 UHRF1BP1Q6BDS2 1440 aa16.41■□□□□ 0.22
PCOTH-203ENST00000435039 WASHC2CQ9Y4E1 1318 aa16.41■□□□□ 0.22
PCOTH-203ENST00000435039 PIK3C2BO00750 1634 aa16.4■□□□□ 0.22
PCOTH-203ENST00000435039 SYNMO15061 1565 aa16.38■□□□□ 0.21
PCOTH-203ENST00000435039 NOS1P29475 1434 aa16.38■□□□□ 0.21
PCOTH-203ENST00000435039 KIF1BO60333 1816 aa16.37■□□□□ 0.21
PCOTH-203ENST00000435039 SPATA31D1Q6ZQQ2 1576 aa16.36■□□□□ 0.21
PCOTH-203ENST00000435039 ERVK-7P63135 1459 aa16.35■□□□□ 0.21
PCOTH-203ENST00000435039 ADGRB3O60242 1522 aa16.35■□□□□ 0.21
PCOTH-203ENST00000435039 DMRT2Q9Y5R5 561 aa16.35■□□□□ 0.21
PCOTH-203ENST00000435039 UGGT1Q9NYU2 1555 aa16.34■□□□□ 0.21
PCOTH-203ENST00000435039 ESF1Q9H501 851 aaKnown RBP16.34■□□□□ 0.21
PCOTH-203ENST00000435039 SPATA31E1Q6ZUB1 1445 aa16.34■□□□□ 0.21
PCOTH-203ENST00000435039 IFT172Q9UG01 1749 aa16.31■□□□□ 0.2
PCOTH-203ENST00000435039 CFAP65Q6ZU64 1925 aaKnown RBP16.29■□□□□ 0.2
PCOTH-203ENST00000435039 PPP1R15AO75807 674 aaPredicted RBP16.29■□□□□ 0.2
PCOTH-203ENST00000435039 L3MBTL2Q969R5 705 aa16.28■□□□□ 0.2
PCOTH-203ENST00000435039 ZMYM3Q14202 1370 aa16.26■□□□□ 0.19
PCOTH-203ENST00000435039 MYOM2P54296 1465 aa16.26■□□□□ 0.19
PCOTH-203ENST00000435039 KDM5AP29375 1690 aaKnown RBP16.26■□□□□ 0.19
PCOTH-203ENST00000435039 ZNF142P52746 1687 aaPredicted RBP16.25■□□□□ 0.19
PCOTH-203ENST00000435039 LTBP4Q8N2S1 1624 aa16.25■□□□□ 0.19
PCOTH-203ENST00000435039 PPLO60437 1756 aa16.25■□□□□ 0.19
PCOTH-203ENST00000435039 RALGAPBQ86X10 1494 aa16.24■□□□□ 0.19
PCOTH-203ENST00000435039 TMEM131LA2VDJ0 1609 aa16.24■□□□□ 0.19
PCOTH-203ENST00000435039 MYO3AQ8NEV4 1616 aa16.24■□□□□ 0.19
PCOTH-203ENST00000435039 TRPM1Q7Z4N2 1603 aa16.23■□□□□ 0.19
PCOTH-203ENST00000435039 PRAG1Q86YV5 1406 aa16.23■□□□□ 0.19
PCOTH-203ENST00000435039 SLC52A1Q9NWF4 448 aa16.22■□□□□ 0.19
PCOTH-203ENST00000435039 LAMC1P11047 1609 aa16.22■□□□□ 0.19
PCOTH-203ENST00000435039 KIAA1210Q9ULL0 1709 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms