RNA–Protein interactions for RNA: ENST00000434658.6

FAM3A-212, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,817 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-212ENST00000434658 ADAMTSL3P82987 1691 aa26.69■■□□□ 1.86
FAM3A-212ENST00000434658 DHX29Q7Z478 1369 aaKnown RBP26.68■■□□□ 1.86
FAM3A-212ENST00000434658 GCC2Q8IWJ2 1684 aa26.67■■□□□ 1.86
FAM3A-212ENST00000434658 SIN3AQ96ST3 1273 aa26.67■■□□□ 1.86
FAM3A-212ENST00000434658 PLXNC1O60486 1568 aa26.66■■□□□ 1.86
FAM3A-212ENST00000434658 RRP7BPQ9NSQ0 103 aa26.63■■□□□ 1.85
FAM3A-212ENST00000434658 MADDQ8WXG6 1647 aa26.62■■□□□ 1.85
FAM3A-212ENST00000434658 ANKRD30AQ9BXX3 1397 aa26.61■■□□□ 1.85
FAM3A-212ENST00000434658 YTHDC1Q96MU7 727 aaKnown RBP26.6■■□□□ 1.85
FAM3A-212ENST00000434658 KIF3BO15066 747 aa26.59■■□□□ 1.85
FAM3A-212ENST00000434658 GGT6Q6P531 493 aa26.59■■□□□ 1.85
FAM3A-212ENST00000434658 GTF3C3Q9Y5Q9 886 aa26.59■■□□□ 1.85
FAM3A-212ENST00000434658 KIF15Q9NS87 1388 aa26.59■■□□□ 1.85
FAM3A-212ENST00000434658 NCOA1Q15788 1441 aa26.57■■□□□ 1.84
FAM3A-212ENST00000434658 DUOX2Q9NRD8 1548 aa26.56■■□□□ 1.84
FAM3A-212ENST00000434658 RIMS1Q86UR5 1692 aaKnown RBP26.56■■□□□ 1.84
FAM3A-212ENST00000434658 FER1L4A9Z1Z3 1794 aa26.55■■□□□ 1.84
FAM3A-212ENST00000434658 ESF1Q9H501 851 aaKnown RBP26.55■■□□□ 1.84
FAM3A-212ENST00000434658 ADGRL2O95490 1459 aa26.55■■□□□ 1.84
FAM3A-212ENST00000434658 PTPRMP28827 1452 aa26.55■■□□□ 1.84
FAM3A-212ENST00000434658 PPP1R15AO75807 674 aaPredicted RBP26.52■■□□□ 1.84
FAM3A-212ENST00000434658 PLPPR3Q6T4P5 718 aa26.51■■□□□ 1.83
FAM3A-212ENST00000434658 PPP6R1Q9UPN7 881 aa26.49■■□□□ 1.83
FAM3A-212ENST00000434658 ROCK1Q13464 1354 aa26.48■■□□□ 1.83
FAM3A-212ENST00000434658 ERBINQ96RT1 1412 aa26.48■■□□□ 1.83
FAM3A-212ENST00000434658 EIF2AK4Q9P2K8 1649 aaKnown RBP26.47■■□□□ 1.83
FAM3A-212ENST00000434658 TONSLQ96HA7 1378 aa26.46■■□□□ 1.83
FAM3A-212ENST00000434658 CNTLNQ9NXG0 1405 aa26.45■■□□□ 1.82
FAM3A-212ENST00000434658 CEBPAP49715 358 aaPredicted RBP26.44■■□□□ 1.82
FAM3A-212ENST00000434658 ANKRD50Q9ULJ7 1429 aa26.42■■□□□ 1.82
FAM3A-212ENST00000434658 RNF17Q9BXT8 1623 aaKnown RBP26.41■■□□□ 1.82
FAM3A-212ENST00000434658 CLTCQ00610 1675 aaKnown RBP26.41■■□□□ 1.82
FAM3A-212ENST00000434658 WASHC2CQ9Y4E1 1318 aa26.41■■□□□ 1.82
FAM3A-212ENST00000434658 ZMYM3Q14202 1370 aa26.39■■□□□ 1.82
FAM3A-212ENST00000434658 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.38■■□□□ 1.81
FAM3A-212ENST00000434658 MROH2AA6NES4 1674 aa26.36■■□□□ 1.81
FAM3A-212ENST00000434658 C3P01024 1663 aa26.36■■□□□ 1.81
FAM3A-212ENST00000434658 MROH1Q8NDA8 1641 aa26.36■■□□□ 1.81
FAM3A-212ENST00000434658 KDM5DQ9BY66 1539 aa26.35■■□□□ 1.81
FAM3A-212ENST00000434658 FAM135AQ9P2D6 1515 aa26.34■■□□□ 1.81
FAM3A-212ENST00000434658 DEPDC5O75140 1603 aa26.32■■□□□ 1.8
FAM3A-212ENST00000434658 PRDM15P57071 1507 aaPredicted RBP26.31■■□□□ 1.8
FAM3A-212ENST00000434658 KANK1Q14678 1352 aa26.3■■□□□ 1.8
FAM3A-212ENST00000434658 ABCC3O15438 1527 aa26.3■■□□□ 1.8
FAM3A-212ENST00000434658 ZC3H13Q5T200 1668 aaKnown RBP26.28■■□□□ 1.8
FAM3A-212ENST00000434658 TRIM52Q96A61 297 aa26.26■■□□□ 1.79
FAM3A-212ENST00000434658 CEP152O94986 1710 aa26.26■■□□□ 1.79
FAM3A-212ENST00000434658 DDX10Q13206 875 aaKnown RBP26.24■■□□□ 1.79
FAM3A-212ENST00000434658 MPHOSPH9Q99550 1183 aa26.24■■□□□ 1.79
FAM3A-212ENST00000434658 FBXO31Q5XUX0 539 aaPredicted RBP26.23■■□□□ 1.79
FAM3A-212ENST00000434658 NPATQ14207 1427 aa26.22■■□□□ 1.79
FAM3A-212ENST00000434658 VWDEQ8N2E2 1590 aa26.22■■□□□ 1.79
FAM3A-212ENST00000434658 PZPP20742 1482 aa26.22■■□□□ 1.79
FAM3A-212ENST00000434658 UNC13BO14795 1591 aa26.2■■□□□ 1.79
FAM3A-212ENST00000434658 CAMSAP1Q5T5Y3 1602 aa26.2■■□□□ 1.79
FAM3A-212ENST00000434658 SETD1BQ9UPS6 1966 aaKnown RBP26.2■■□□□ 1.78
FAM3A-212ENST00000434658 PELP1Q8IZL8 1130 aaKnown RBP26.19■■□□□ 1.78
FAM3A-212ENST00000434658 LMTK2Q8IWU2 1503 aa26.18■■□□□ 1.78
FAM3A-212ENST00000434658 NUP155O75694 1391 aa26.17■■□□□ 1.78
FAM3A-212ENST00000434658 LMTK3Q96Q04 1460 aa26.17■■□□□ 1.78
FAM3A-212ENST00000434658 PREX1Q8TCU6 1659 aa26.16■■□□□ 1.78
FAM3A-212ENST00000434658 ARHGAP31Q2M1Z3 1444 aa26.15■■□□□ 1.78
FAM3A-212ENST00000434658 UHRF1BP1Q6BDS2 1440 aa26.15■■□□□ 1.78
FAM3A-212ENST00000434658 HIRIP3Q9BW71 556 aaPredicted RBP26.14■■□□□ 1.78
FAM3A-212ENST00000434658 ANKRD30BQ9BXX2 1392 aa26.13■■□□□ 1.77
FAM3A-212ENST00000434658 TNRQ92752 1358 aa26.13■■□□□ 1.77
FAM3A-212ENST00000434658 RPRD2Q5VT52 1461 aaKnown RBP26.12■■□□□ 1.77
FAM3A-212ENST00000434658 HSPA2P54652 639 aa26.11■■□□□ 1.77
FAM3A-212ENST00000434658 CFAP65Q6ZU64 1925 aaKnown RBP26.11■■□□□ 1.77
FAM3A-212ENST00000434658 IQGAP3Q86VI3 1631 aa26.1■■□□□ 1.77
FAM3A-212ENST00000434658 EFCAB6Q5THR3 1501 aa26.1■■□□□ 1.77
FAM3A-212ENST00000434658 ERVK-7P63135 1459 aa26.09■■□□□ 1.77
FAM3A-212ENST00000434658 SPATA31D1Q6ZQQ2 1576 aa26.08■■□□□ 1.77
FAM3A-212ENST00000434658 TET3O43151 1660 aa26.08■■□□□ 1.77
FAM3A-212ENST00000434658 MYO3AQ8NEV4 1616 aa26.07■■□□□ 1.76
FAM3A-212ENST00000434658 CCER2I3L3R5 266 aa26.05■■□□□ 1.76
FAM3A-212ENST00000434658 FOXD1Q16676 465 aa26.03■■□□□ 1.76
FAM3A-212ENST00000434658 ANP32CO43423 234 aa26.02■■□□□ 1.76
FAM3A-212ENST00000434658 L3MBTL2Q969R5 705 aa26.02■■□□□ 1.76
FAM3A-212ENST00000434658 SLC4A1APQ9BWU0 796 aaKnown RBP26.02■■□□□ 1.76
FAM3A-212ENST00000434658 CEP170BQ9Y4F5 1589 aaPredicted RBP26.01■■□□□ 1.75
FAM3A-212ENST00000434658 A2ML1A8K2U0 1454 aa26■■□□□ 1.75
FAM3A-212ENST00000434658 NLRP1Q9C000 1473 aa26■■□□□ 1.75
FAM3A-212ENST00000434658 E9PCH4 1651 aa25.99■■□□□ 1.75
FAM3A-212ENST00000434658 NOS1P29475 1434 aa25.99■■□□□ 1.75
FAM3A-212ENST00000434658 ZNF142P52746 1687 aaPredicted RBP25.99■■□□□ 1.75
FAM3A-212ENST00000434658 HSPA5P11021 654 aaKnown RBP25.98■■□□□ 1.75
FAM3A-212ENST00000434658 EIF4G2P78344 907 aaKnown RBP eCLIP25.95■■□□□ 1.74
FAM3A-212ENST00000434658 SYNMO15061 1565 aa25.94■■□□□ 1.74
FAM3A-212ENST00000434658 IDI1Q13907 227 aa25.94■■□□□ 1.74
FAM3A-212ENST00000434658 PKD2Q13563 968 aa25.93■■□□□ 1.74
FAM3A-212ENST00000434658 UGGT1Q9NYU2 1555 aa25.93■■□□□ 1.74
FAM3A-212ENST00000434658 SLC52A1Q9NWF4 448 aa25.92■■□□□ 1.74
FAM3A-212ENST00000434658 THEMISQ8N1K5 641 aaPredicted RBP25.91■■□□□ 1.74
FAM3A-212ENST00000434658 WASHC2AQ641Q2 1341 aa25.9■■□□□ 1.74
FAM3A-212ENST00000434658 POLR1AO95602 1720 aaPredicted RBP25.89■■□□□ 1.73
FAM3A-212ENST00000434658 STAG3Q9UJ98 1225 aa25.88■■□□□ 1.73
FAM3A-212ENST00000434658 PIK3C2BO00750 1634 aa25.87■■□□□ 1.73
FAM3A-212ENST00000434658 NBPF8Q3BBV2 869 aa25.86■■□□□ 1.73
FAM3A-212ENST00000434658 STRCQ7RTU9 1775 aa25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms