RNA–Protein interactions for RNA: ENST00000434537.1

LINC01007-201, Transcript of long intergenic non-protein coding RNA 1007, humanhuman

TSL 1 (best) BASIC

Gene LINC01007, Length 2,291 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01007-201ENST00000434537 TSPY4P0CV99 314 aa13.24□□□□□ -0.29
LINC01007-201ENST00000434537 TSPY10P0CW01 314 aa13.24□□□□□ -0.29
LINC01007-201ENST00000434537 PPP6R1Q9UPN7 881 aa13.23□□□□□ -0.29
LINC01007-201ENST00000434537 PZPP20742 1482 aa13.23□□□□□ -0.29
LINC01007-201ENST00000434537 ANKRD30BQ9BXX2 1392 aa13.21□□□□□ -0.3
LINC01007-201ENST00000434537 KIF15Q9NS87 1388 aa13.21□□□□□ -0.3
LINC01007-201ENST00000434537 PLCH2O75038 1416 aa13.2□□□□□ -0.3
LINC01007-201ENST00000434537 MIER1Q8N108 512 aa13.2□□□□□ -0.3
LINC01007-201ENST00000434537 CD109Q6YHK3 1445 aa13.19□□□□□ -0.3
LINC01007-201ENST00000434537 RSPH4AQ5TD94 716 aa13.19□□□□□ -0.3
LINC01007-201ENST00000434537 ARHGEF12Q9NZN5 1544 aa13.19□□□□□ -0.3
LINC01007-201ENST00000434537 KIAA1107Q9UPP5 1409 aa13.18□□□□□ -0.3
LINC01007-201ENST00000434537 PLEKHH2Q8IVE3 1493 aa13.17□□□□□ -0.3
LINC01007-201ENST00000434537 MAST1Q9Y2H9 1570 aa13.17□□□□□ -0.3
LINC01007-201ENST00000434537 RPRD2Q5VT52 1461 aaKnown RBP13.16□□□□□ -0.3
LINC01007-201ENST00000434537 YTHDC1Q96MU7 727 aaKnown RBP13.16□□□□□ -0.3
LINC01007-201ENST00000434537 ABCC1P33527 1531 aa13.16□□□□□ -0.3
LINC01007-201ENST00000434537 NUP155O75694 1391 aa13.15□□□□□ -0.3
LINC01007-201ENST00000434537 EFCAB2Q5VUJ9 269 aa13.14□□□□□ -0.31
LINC01007-201ENST00000434537 HIRIP3Q9BW71 556 aaPredicted RBP13.14□□□□□ -0.31
LINC01007-201ENST00000434537 KDM5DQ9BY66 1539 aa13.14□□□□□ -0.31
LINC01007-201ENST00000434537 PLEKHG5O94827 1062 aa13.14□□□□□ -0.31
LINC01007-201ENST00000434537 PKD2Q13563 968 aa13.14□□□□□ -0.31
LINC01007-201ENST00000434537 PLXNC1O60486 1568 aa13.13□□□□□ -0.31
LINC01007-201ENST00000434537 L3MBTL2Q969R5 705 aa13.13□□□□□ -0.31
LINC01007-201ENST00000434537 ABCA9Q8IUA7 1624 aa13.13□□□□□ -0.31
LINC01007-201ENST00000434537 ARAP3Q8WWN8 1544 aa13.12□□□□□ -0.31
LINC01007-201ENST00000434537 TRAPPC8Q9Y2L5 1435 aa13.12□□□□□ -0.31
LINC01007-201ENST00000434537 PPP4R3CPQ6ZMV5 832 aa13.1□□□□□ -0.31
LINC01007-201ENST00000434537 FANCAO15360 1455 aa13.09□□□□□ -0.31
LINC01007-201ENST00000434537 FAM135AQ9P2D6 1515 aa13.09□□□□□ -0.31
LINC01007-201ENST00000434537 UNC13BO14795 1591 aa13.08□□□□□ -0.32
LINC01007-201ENST00000434537 DUOX2Q9NRD8 1548 aa13.08□□□□□ -0.32
LINC01007-201ENST00000434537 AFAP1Q8N556 730 aa13.06□□□□□ -0.32
LINC01007-201ENST00000434537 ZFYVE16Q7Z3T8 1539 aa13.05□□□□□ -0.32
LINC01007-201ENST00000434537 DDX10Q13206 875 aaKnown RBP13.05□□□□□ -0.32
LINC01007-201ENST00000434537 ERBINQ96RT1 1412 aa13.05□□□□□ -0.32
LINC01007-201ENST00000434537 NBPF8Q3BBV2 869 aa13.05□□□□□ -0.32
LINC01007-201ENST00000434537 SPAG9O60271 1321 aaKnown RBP13.04□□□□□ -0.32
LINC01007-201ENST00000434537 ADAMTSL3P82987 1691 aa13.04□□□□□ -0.32
LINC01007-201ENST00000434537 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.04□□□□□ -0.32
LINC01007-201ENST00000434537 IQGAP3Q86VI3 1631 aa13.03□□□□□ -0.32
LINC01007-201ENST00000434537 RTEL1-TNFRSF6BF6WH68 1400 aa13.03□□□□□ -0.32
LINC01007-201ENST00000434537 PTPRMP28827 1452 aa13.03□□□□□ -0.32
LINC01007-201ENST00000434537 FBXO41Q8TF61 875 aa13.02□□□□□ -0.32
LINC01007-201ENST00000434537 MAGI2Q86UL8 1455 aa13.02□□□□□ -0.32
LINC01007-201ENST00000434537 SCAPERQ9BY12 1400 aa13.02□□□□□ -0.33
LINC01007-201ENST00000434537 INO80Q9ULG1 1556 aaPredicted RBP13.02□□□□□ -0.33
LINC01007-201ENST00000434537 HSPA5P11021 654 aaKnown RBP13.01□□□□□ -0.33
LINC01007-201ENST00000434537 ATP7AQ04656 1500 aa13.01□□□□□ -0.33
LINC01007-201ENST00000434537 NEO1Q92859 1461 aa13□□□□□ -0.33
LINC01007-201ENST00000434537 EIF4G2P78344 907 aaKnown RBP eCLIP13□□□□□ -0.33
LINC01007-201ENST00000434537 RAPGEF3O95398 923 aa12.99□□□□□ -0.33
LINC01007-201ENST00000434537 FRMPD1Q5SYB0 1578 aa12.99□□□□□ -0.33
LINC01007-201ENST00000434537 FBXO3Q9UK99 471 aa12.99□□□□□ -0.33
LINC01007-201ENST00000434537 BCORL1Q5H9F3 1711 aa12.98□□□□□ -0.33
LINC01007-201ENST00000434537 FOXD4L1Q9NU39 408 aa12.98□□□□□ -0.33
LINC01007-201ENST00000434537 PLA2R1Q13018 1463 aa12.97□□□□□ -0.33
LINC01007-201ENST00000434537 ZNF326Q5BKZ1 582 aaKnown RBP12.97□□□□□ -0.33
LINC01007-201ENST00000434537 MADDQ8WXG6 1647 aa12.97□□□□□ -0.33
LINC01007-201ENST00000434537 CCDC144AA2RUR9 1427 aa12.96□□□□□ -0.33
LINC01007-201ENST00000434537 CFAP74Q9C0B2 1584 aa12.96□□□□□ -0.34
LINC01007-201ENST00000434537 KIDINS220Q9ULH0 1771 aa12.95□□□□□ -0.34
LINC01007-201ENST00000434537 DEPDC5O75140 1603 aa12.95□□□□□ -0.34
LINC01007-201ENST00000434537 WASHC2AQ641Q2 1341 aa12.95□□□□□ -0.34
LINC01007-201ENST00000434537 MYT1LQ9UL68 1186 aa12.95□□□□□ -0.34
LINC01007-201ENST00000434537 ZNF518AQ6AHZ1 1483 aa12.95□□□□□ -0.34
LINC01007-201ENST00000434537 ARID4BQ4LE39 1312 aaPredicted RBP12.95□□□□□ -0.34
LINC01007-201ENST00000434537 SPATA31E1Q6ZUB1 1445 aa12.95□□□□□ -0.34
LINC01007-201ENST00000434537 UHRF1BP1Q6BDS2 1440 aa12.94□□□□□ -0.34
LINC01007-201ENST00000434537 ARHGEF40Q8TER5 1519 aa12.94□□□□□ -0.34
LINC01007-201ENST00000434537 E9PCH4 1651 aa12.93□□□□□ -0.34
LINC01007-201ENST00000434537 LMTK3Q96Q04 1460 aa12.93□□□□□ -0.34
LINC01007-201ENST00000434537 DCAF11Q8TEB1 546 aa12.92□□□□□ -0.34
LINC01007-201ENST00000434537 RIMS1Q86UR5 1692 aaKnown RBP12.92□□□□□ -0.34
LINC01007-201ENST00000434537 POGZQ7Z3K3 1410 aa12.92□□□□□ -0.34
LINC01007-201ENST00000434537 KDM5CP41229 1560 aa12.92□□□□□ -0.34
LINC01007-201ENST00000434537 ATP10AO60312 1499 aa12.92□□□□□ -0.34
LINC01007-201ENST00000434537 EIF2AK4Q9P2K8 1649 aaKnown RBP12.91□□□□□ -0.34
LINC01007-201ENST00000434537 C11orf95C9JLR9 678 aaPredicted RBP12.91□□□□□ -0.34
LINC01007-201ENST00000434537 DHX29Q7Z478 1369 aaKnown RBP12.91□□□□□ -0.34
LINC01007-201ENST00000434537 RALGAPBQ86X10 1494 aa12.91□□□□□ -0.34
LINC01007-201ENST00000434537 KIF3BO15066 747 aa12.9□□□□□ -0.34
LINC01007-201ENST00000434537 POLR1AO95602 1720 aaPredicted RBP12.9□□□□□ -0.34
LINC01007-201ENST00000434537 RICTORQ6R327 1708 aa12.9□□□□□ -0.34
LINC01007-201ENST00000434537 MROH1Q8NDA8 1641 aa12.9□□□□□ -0.34
LINC01007-201ENST00000434537 VWDEQ8N2E2 1590 aa12.89□□□□□ -0.35
LINC01007-201ENST00000434537 USP47Q96K76 1375 aa12.89□□□□□ -0.35
LINC01007-201ENST00000434537 PRDM15P57071 1507 aaPredicted RBP12.89□□□□□ -0.35
LINC01007-201ENST00000434537 RGL3Q3MIN7 710 aa12.89□□□□□ -0.35
LINC01007-201ENST00000434537 TET3O43151 1660 aa12.89□□□□□ -0.35
LINC01007-201ENST00000434537 A2MP01023 1474 aa12.88□□□□□ -0.35
LINC01007-201ENST00000434537 ANP32CO43423 234 aa12.88□□□□□ -0.35
LINC01007-201ENST00000434537 SPHKAPQ2M3C7 1700 aa12.88□□□□□ -0.35
LINC01007-201ENST00000434537 CCDC7Q96M83 1385 aa12.88□□□□□ -0.35
LINC01007-201ENST00000434537 MLH3Q9UHC1 1453 aa12.87□□□□□ -0.35
LINC01007-201ENST00000434537 KANK1Q14678 1352 aa12.86□□□□□ -0.35
LINC01007-201ENST00000434537 ZMYM4Q5VZL5 1548 aa12.86□□□□□ -0.35
LINC01007-201ENST00000434537 PRAG1Q86YV5 1406 aa12.86□□□□□ -0.35
LINC01007-201ENST00000434537 TRPM1Q7Z4N2 1603 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms