RNA–Protein interactions for RNA: ENST00000434243.5

EDEM1-202, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

TSL 2

Gene EDEM1, Length 978 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-202ENST00000434243 CAMSAP1Q5T5Y3 1602 aa20.75■□□□□ 0.91
EDEM1-202ENST00000434243 KDM5DQ9BY66 1539 aa20.73■□□□□ 0.91
EDEM1-202ENST00000434243 RRP7BPQ9NSQ0 103 aa20.72■□□□□ 0.91
EDEM1-202ENST00000434243 MAST1Q9Y2H9 1570 aa20.72■□□□□ 0.91
EDEM1-202ENST00000434243 TNRQ92752 1358 aa20.72■□□□□ 0.91
EDEM1-202ENST00000434243 PKD2Q13563 968 aa20.71■□□□□ 0.91
EDEM1-202ENST00000434243 MYO3AQ8NEV4 1616 aa20.71■□□□□ 0.91
EDEM1-202ENST00000434243 CEP170BQ9Y4F5 1589 aaPredicted RBP20.7■□□□□ 0.9
EDEM1-202ENST00000434243 ABCC5O15440 1437 aa20.69■□□□□ 0.9
EDEM1-202ENST00000434243 PZPP20742 1482 aa20.69■□□□□ 0.9
EDEM1-202ENST00000434243 PTPN23Q9H3S7 1636 aa20.68■□□□□ 0.9
EDEM1-202ENST00000434243 CHIC2Q9UKJ5 165 aa20.68■□□□□ 0.9
EDEM1-202ENST00000434243 KIF15Q9NS87 1388 aa20.68■□□□□ 0.9
EDEM1-202ENST00000434243 FGD6Q6ZV73 1430 aa20.68■□□□□ 0.9
EDEM1-202ENST00000434243 A2ML1A8K2U0 1454 aa20.68■□□□□ 0.9
EDEM1-202ENST00000434243 FAM135AQ9P2D6 1515 aa20.68■□□□□ 0.9
EDEM1-202ENST00000434243 FAM50AQ14320 339 aaKnown RBP20.66■□□□□ 0.9
EDEM1-202ENST00000434243 PLA2R1Q13018 1463 aa20.65■□□□□ 0.9
EDEM1-202ENST00000434243 DAPK1P53355 1430 aa20.65■□□□□ 0.9
EDEM1-202ENST00000434243 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.65■□□□□ 0.92e-6■■■□□ 14.9
EDEM1-202ENST00000434243 DUOX2Q9NRD8 1548 aa20.64■□□□□ 0.9
EDEM1-202ENST00000434243 ZNF142P52746 1687 aaPredicted RBP20.64■□□□□ 0.89
EDEM1-202ENST00000434243 TCOF1Q13428 1488 aaKnown RBP20.62■□□□□ 0.89
EDEM1-202ENST00000434243 SHANK2Q9UPX8 1470 aa20.62■□□□□ 0.89
EDEM1-202ENST00000434243 THEMISQ8N1K5 641 aaPredicted RBP20.62■□□□□ 0.89
EDEM1-202ENST00000434243 ZNF335Q9H4Z2 1342 aaPredicted RBP20.61■□□□□ 0.89
EDEM1-202ENST00000434243 ABCC3O15438 1527 aa20.61■□□□□ 0.89
EDEM1-202ENST00000434243 RNF17Q9BXT8 1623 aaKnown RBP20.6■□□□□ 0.89
EDEM1-202ENST00000434243 ANKRD30AQ9BXX3 1397 aa20.6■□□□□ 0.89
EDEM1-202ENST00000434243 EIF2AK4Q9P2K8 1649 aaKnown RBP20.6■□□□□ 0.89
EDEM1-202ENST00000434243 DNMT1P26358 1616 aaKnown RBP20.6■□□□□ 0.89
EDEM1-202ENST00000434243 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.59■□□□□ 0.89
EDEM1-202ENST00000434243 ANKLE2Q86XL3 938 aa20.59■□□□□ 0.89
EDEM1-202ENST00000434243 ERBINQ96RT1 1412 aa20.59■□□□□ 0.89
EDEM1-202ENST00000434243 NLRP1Q9C000 1473 aa20.58■□□□□ 0.89
EDEM1-202ENST00000434243 LTBP4Q8N2S1 1624 aa20.57■□□□□ 0.88
EDEM1-202ENST00000434243 KANK1Q14678 1352 aa20.56■□□□□ 0.88
EDEM1-202ENST00000434243 CROCC2H7BZ55 1655 aa20.55■□□□□ 0.88
EDEM1-202ENST00000434243 UGGT1Q9NYU2 1555 aa20.55■□□□□ 0.88
EDEM1-202ENST00000434243 ZC3H13Q5T200 1668 aaKnown RBP20.54■□□□□ 0.88
EDEM1-202ENST00000434243 MROH1Q8NDA8 1641 aa20.54■□□□□ 0.88
EDEM1-202ENST00000434243 ERVK-7P63135 1459 aa20.54■□□□□ 0.88
EDEM1-202ENST00000434243 PPARGC1BQ86YN6 1023 aaKnown RBP20.53■□□□□ 0.88
EDEM1-202ENST00000434243 SPATA31D1Q6ZQQ2 1576 aa20.51■□□□□ 0.87
EDEM1-202ENST00000434243 CEP152O94986 1710 aa20.5■□□□□ 0.87
EDEM1-202ENST00000434243 PRDM15P57071 1507 aaPredicted RBP20.49■□□□□ 0.87
EDEM1-202ENST00000434243 UBAP1LF5GYI3 381 aa20.48■□□□□ 0.87
EDEM1-202ENST00000434243 IQSEC2Q5JU85 1478 aa20.48■□□□□ 0.87
EDEM1-202ENST00000434243 NPHP4O75161 1426 aaPredicted RBP20.47■□□□□ 0.87
EDEM1-202ENST00000434243 ARHGAP31Q2M1Z3 1444 aa20.47■□□□□ 0.87
EDEM1-202ENST00000434243 STAG3Q9UJ98 1225 aa20.47■□□□□ 0.87
EDEM1-202ENST00000434243 ITGAEP38570 1179 aa20.45■□□□□ 0.86
EDEM1-202ENST00000434243 NEURL4Q96JN8 1562 aa20.45■□□□□ 0.86
EDEM1-202ENST00000434243 ADGRL2O95490 1459 aa20.44■□□□□ 0.86
EDEM1-202ENST00000434243 ANKRD50Q9ULJ7 1429 aa20.44■□□□□ 0.86
EDEM1-202ENST00000434243 POLR1AO95602 1720 aaPredicted RBP20.42■□□□□ 0.86
EDEM1-202ENST00000434243 TXNDC2Q86VQ3 553 aa20.42■□□□□ 0.86
EDEM1-202ENST00000434243 EID1Q9Y6B2 187 aa20.41■□□□□ 0.86
EDEM1-202ENST00000434243 DEPDC5O75140 1603 aa20.41■□□□□ 0.86
EDEM1-202ENST00000434243 CFAP65Q6ZU64 1925 aaKnown RBP20.41■□□□□ 0.86
EDEM1-202ENST00000434243 MED14O60244 1454 aa20.4■□□□□ 0.86
EDEM1-202ENST00000434243 SCAF1Q9H7N4 1312 aaKnown RBP20.39■□□□□ 0.85
EDEM1-202ENST00000434243 IDI1Q13907 227 aa20.39■□□□□ 0.85
EDEM1-202ENST00000434243 LTKP29376 864 aa20.38■□□□□ 0.85
EDEM1-202ENST00000434243 LMTK2Q8IWU2 1503 aa20.37■□□□□ 0.85
EDEM1-202ENST00000434243 CPS1P31327 1500 aa20.37■□□□□ 0.85
EDEM1-202ENST00000434243 PIP4K2BP78356 416 aa20.36■□□□□ 0.85
EDEM1-202ENST00000434243 VWDEQ8N2E2 1590 aa20.36■□□□□ 0.85
EDEM1-202ENST00000434243 SCAF11Q99590 1463 aaKnown RBP20.36■□□□□ 0.85
EDEM1-202ENST00000434243 TOM1O60784 492 aa20.35■□□□□ 0.85
EDEM1-202ENST00000434243 UBR1Q8IWV7 1749 aa20.34■□□□□ 0.85
EDEM1-202ENST00000434243 IQGAP1P46940 1657 aa20.33■□□□□ 0.85
EDEM1-202ENST00000434243 ROCK1Q13464 1354 aa20.33■□□□□ 0.84
EDEM1-202ENST00000434243 TMEM2Q9UHN6 1383 aa20.33■□□□□ 0.84
EDEM1-202ENST00000434243 SLC52A1Q9NWF4 448 aa20.32■□□□□ 0.84
EDEM1-202ENST00000434243 EFCAB6Q5THR3 1501 aa20.32■□□□□ 0.84
EDEM1-202ENST00000434243 ARHGAP23Q9P227 1491 aa20.31■□□□□ 0.84
EDEM1-202ENST00000434243 NOS1P29475 1434 aa20.31■□□□□ 0.84
EDEM1-202ENST00000434243 SLIT1O75093 1534 aa20.31■□□□□ 0.84
EDEM1-202ENST00000434243 DISP3Q9P2K9 1392 aa20.31■□□□□ 0.84
EDEM1-202ENST00000434243 PIK3C2BO00750 1634 aa20.31■□□□□ 0.84
EDEM1-202ENST00000434243 BCANQ96GW7 911 aa20.3■□□□□ 0.84
EDEM1-202ENST00000434243 CHGAP10645 457 aaKnown RBP20.28■□□□□ 0.84
EDEM1-202ENST00000434243 SYNMO15061 1565 aa20.27■□□□□ 0.84
EDEM1-202ENST00000434243 SENP3Q9H4L4 574 aaPredicted RBP20.27■□□□□ 0.84
EDEM1-202ENST00000434243 RPRD2Q5VT52 1461 aaKnown RBP20.26■□□□□ 0.83
EDEM1-202ENST00000434243 NUP155O75694 1391 aa20.26■□□□□ 0.83
EDEM1-202ENST00000434243 SLC26A8Q96RN1 970 aa20.25■□□□□ 0.83
EDEM1-202ENST00000434243 LRRC7Q96NW7 1537 aa20.23■□□□□ 0.83
EDEM1-202ENST00000434243 PPP1R15AO75807 674 aaPredicted RBP20.23■□□□□ 0.83
EDEM1-202ENST00000434243 HSPA1LP34931 641 aa20.22■□□□□ 0.83
EDEM1-202ENST00000434243 HDGFP51858 240 aaKnown RBP20.22■□□□□ 0.83
EDEM1-202ENST00000434243 ADGRB3O60242 1522 aa20.22■□□□□ 0.83
EDEM1-202ENST00000434243 UNC13BO14795 1591 aa20.21■□□□□ 0.83
EDEM1-202ENST00000434243 TET3O43151 1660 aa20.21■□□□□ 0.83
EDEM1-202ENST00000434243 KCNA6P17658 529 aa20.18■□□□□ 0.82
EDEM1-202ENST00000434243 KDM5AP29375 1690 aaKnown RBP20.18■□□□□ 0.82
EDEM1-202ENST00000434243 STRCP1A6NGW2 1772 aa20.17■□□□□ 0.82
EDEM1-202ENST00000434243 RRBP1Q9P2E9 1410 aaKnown RBP20.17■□□□□ 0.82
EDEM1-202ENST00000434243 NUTM2DQ5VT03 806 aaPredicted RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms