RNA–Protein interactions for RNA: ENST00000434101.6

TRAPPC4-202, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 794 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-202ENST00000434101 DUOX2Q9NRD8 1548 aa20.41■□□□□ 0.86
TRAPPC4-202ENST00000434101 RNF17Q9BXT8 1623 aaKnown RBP20.4■□□□□ 0.86
TRAPPC4-202ENST00000434101 KDM5DQ9BY66 1539 aa20.39■□□□□ 0.85
TRAPPC4-202ENST00000434101 FAM50AQ14320 339 aaKnown RBP20.38■□□□□ 0.85
TRAPPC4-202ENST00000434101 KIF15Q9NS87 1388 aa20.37■□□□□ 0.85
TRAPPC4-202ENST00000434101 WASHC2CQ9Y4E1 1318 aa20.36■□□□□ 0.85
TRAPPC4-202ENST00000434101 ANKRD30AQ9BXX3 1397 aa20.35■□□□□ 0.85
TRAPPC4-202ENST00000434101 ZC3H13Q5T200 1668 aaKnown RBP20.35■□□□□ 0.85
TRAPPC4-202ENST00000434101 PTPRKQ15262 1439 aa20.35■□□□□ 0.85
TRAPPC4-202ENST00000434101 ERBINQ96RT1 1412 aa20.35■□□□□ 0.85
TRAPPC4-202ENST00000434101 RRP7BPQ9NSQ0 103 aa20.33■□□□□ 0.85
TRAPPC4-202ENST00000434101 CHIC2Q9UKJ5 165 aa20.32■□□□□ 0.84
TRAPPC4-202ENST00000434101 MYO3AQ8NEV4 1616 aa20.31■□□□□ 0.84
TRAPPC4-202ENST00000434101 PZPP20742 1482 aa20.3■□□□□ 0.84
TRAPPC4-202ENST00000434101 ZNF142P52746 1687 aaPredicted RBP20.3■□□□□ 0.84
TRAPPC4-202ENST00000434101 MROH1Q8NDA8 1641 aa20.3■□□□□ 0.84
TRAPPC4-202ENST00000434101 ADGRL2O95490 1459 aa20.3■□□□□ 0.84
TRAPPC4-202ENST00000434101 NCOA1Q15788 1441 aa20.29■□□□□ 0.84
TRAPPC4-202ENST00000434101 ABCC3O15438 1527 aa20.29■□□□□ 0.84
TRAPPC4-202ENST00000434101 PPARGC1BQ86YN6 1023 aaKnown RBP20.28■□□□□ 0.84
TRAPPC4-202ENST00000434101 STRCQ7RTU9 1775 aa20.28■□□□□ 0.84
TRAPPC4-202ENST00000434101 CEP152O94986 1710 aa20.27■□□□□ 0.84
TRAPPC4-202ENST00000434101 PRDM15P57071 1507 aaPredicted RBP20.27■□□□□ 0.83
TRAPPC4-202ENST00000434101 CEP170BQ9Y4F5 1589 aaPredicted RBP20.26■□□□□ 0.83
TRAPPC4-202ENST00000434101 DMRT2Q9Y5R5 561 aa20.26■□□□□ 0.83
TRAPPC4-202ENST00000434101 DEPDC5O75140 1603 aa20.26■□□□□ 0.83
TRAPPC4-202ENST00000434101 CFAP65Q6ZU64 1925 aaKnown RBP20.25■□□□□ 0.83
TRAPPC4-202ENST00000434101 CAMSAP1Q5T5Y3 1602 aa20.24■□□□□ 0.83
TRAPPC4-202ENST00000434101 TNRQ92752 1358 aa20.24■□□□□ 0.83
TRAPPC4-202ENST00000434101 KANK1Q14678 1352 aa20.23■□□□□ 0.83
TRAPPC4-202ENST00000434101 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.23■□□□□ 0.833e-6■■■■□ 26.4
TRAPPC4-202ENST00000434101 FBXO31Q5XUX0 539 aaPredicted RBP20.23■□□□□ 0.83
TRAPPC4-202ENST00000434101 A2ML1A8K2U0 1454 aa20.22■□□□□ 0.83
TRAPPC4-202ENST00000434101 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.2■□□□□ 0.82
TRAPPC4-202ENST00000434101 ANKRD50Q9ULJ7 1429 aa20.19■□□□□ 0.82
TRAPPC4-202ENST00000434101 SPATA31D1Q6ZQQ2 1576 aa20.19■□□□□ 0.82
TRAPPC4-202ENST00000434101 ROCK1Q13464 1354 aa20.19■□□□□ 0.82
TRAPPC4-202ENST00000434101 PLA2R1Q13018 1463 aa20.18■□□□□ 0.82
TRAPPC4-202ENST00000434101 NLRP1Q9C000 1473 aa20.18■□□□□ 0.82
TRAPPC4-202ENST00000434101 PTPRTO14522 1441 aa20.18■□□□□ 0.82
TRAPPC4-202ENST00000434101 ARHGAP31Q2M1Z3 1444 aa20.17■□□□□ 0.82
TRAPPC4-202ENST00000434101 ERVK-7P63135 1459 aa20.17■□□□□ 0.82
TRAPPC4-202ENST00000434101 VWDEQ8N2E2 1590 aa20.16■□□□□ 0.82
TRAPPC4-202ENST00000434101 RRBP1Q9P2E9 1410 aaKnown RBP20.15■□□□□ 0.82
TRAPPC4-202ENST00000434101 LMTK2Q8IWU2 1503 aa20.14■□□□□ 0.81
TRAPPC4-202ENST00000434101 ITGAEP38570 1179 aa20.14■□□□□ 0.81
TRAPPC4-202ENST00000434101 PKD2Q13563 968 aa20.14■□□□□ 0.81
TRAPPC4-202ENST00000434101 UGGT1Q9NYU2 1555 aa20.12■□□□□ 0.81
TRAPPC4-202ENST00000434101 POLR1AO95602 1720 aaPredicted RBP20.1■□□□□ 0.81
TRAPPC4-202ENST00000434101 NCKAP5LQ9HCH0 1330 aa20.1■□□□□ 0.81
TRAPPC4-202ENST00000434101 THEMISQ8N1K5 641 aaPredicted RBP20.1■□□□□ 0.81
TRAPPC4-202ENST00000434101 UNC13BO14795 1591 aa20.09■□□□□ 0.81
TRAPPC4-202ENST00000434101 EFCAB6Q5THR3 1501 aa20.08■□□□□ 0.81
TRAPPC4-202ENST00000434101 ILDR1Q86SU0 546 aaPredicted RBP20.07■□□□□ 0.8
TRAPPC4-202ENST00000434101 TET3O43151 1660 aa20.07■□□□□ 0.8
TRAPPC4-202ENST00000434101 GCC2Q8IWJ2 1684 aa20.06■□□□□ 0.8
TRAPPC4-202ENST00000434101 UBR1Q8IWV7 1749 aa20.05■□□□□ 0.8
TRAPPC4-202ENST00000434101 ANKLE2Q86XL3 938 aa20.04■□□□□ 0.8
TRAPPC4-202ENST00000434101 CERKQ8TCT0 537 aa20.04■□□□□ 0.8
TRAPPC4-202ENST00000434101 RPRD2Q5VT52 1461 aaKnown RBP20.04■□□□□ 0.8
TRAPPC4-202ENST00000434101 FBXO41Q8TF61 875 aa20.03■□□□□ 0.8
TRAPPC4-202ENST00000434101 IQGAP3Q86VI3 1631 aa20.02■□□□□ 0.8
TRAPPC4-202ENST00000434101 NEURL4Q96JN8 1562 aa20.01■□□□□ 0.79
TRAPPC4-202ENST00000434101 PIK3C2BO00750 1634 aa20■□□□□ 0.79
TRAPPC4-202ENST00000434101 NOS1P29475 1434 aa20■□□□□ 0.79
TRAPPC4-202ENST00000434101 KDM5AP29375 1690 aaKnown RBP20■□□□□ 0.79
TRAPPC4-202ENST00000434101 SYNMO15061 1565 aa19.99■□□□□ 0.79
TRAPPC4-202ENST00000434101 NUP155O75694 1391 aa19.98■□□□□ 0.79
TRAPPC4-202ENST00000434101 STAG3Q9UJ98 1225 aa19.98■□□□□ 0.79
TRAPPC4-202ENST00000434101 LTBP4Q8N2S1 1624 aa19.98■□□□□ 0.79
TRAPPC4-202ENST00000434101 MED14O60244 1454 aa19.97■□□□□ 0.79
TRAPPC4-202ENST00000434101 E9PCH4 1651 aa19.97■□□□□ 0.79
TRAPPC4-202ENST00000434101 SLC52A1Q9NWF4 448 aa19.96■□□□□ 0.79
TRAPPC4-202ENST00000434101 IQGAP1P46940 1657 aa19.96■□□□□ 0.79
TRAPPC4-202ENST00000434101 NPHP4O75161 1426 aaPredicted RBP19.95■□□□□ 0.78
TRAPPC4-202ENST00000434101 IDI1Q13907 227 aa19.95■□□□□ 0.78
TRAPPC4-202ENST00000434101 SLIT1O75093 1534 aa19.95■□□□□ 0.78
TRAPPC4-202ENST00000434101 NAIPQ13075 1403 aa19.94■□□□□ 0.78
TRAPPC4-202ENST00000434101 ARHGAP23Q9P227 1491 aa19.93■□□□□ 0.78
TRAPPC4-202ENST00000434101 ZNF335Q9H4Z2 1342 aaPredicted RBP19.93■□□□□ 0.78
TRAPPC4-202ENST00000434101 HFM1A2PYH4 1435 aa19.93■□□□□ 0.78
TRAPPC4-202ENST00000434101 SCAF11Q99590 1463 aaKnown RBP19.92■□□□□ 0.78
TRAPPC4-202ENST00000434101 IQSEC2Q5JU85 1478 aa19.92■□□□□ 0.78
TRAPPC4-202ENST00000434101 ADGRB3O60242 1522 aa19.92■□□□□ 0.78
TRAPPC4-202ENST00000434101 EID1Q9Y6B2 187 aa19.91■□□□□ 0.78
TRAPPC4-202ENST00000434101 TXNDC2Q86VQ3 553 aa19.9■□□□□ 0.78
TRAPPC4-202ENST00000434101 TMEM2Q9UHN6 1383 aa19.9■□□□□ 0.78
TRAPPC4-202ENST00000434101 MYO5BQ9ULV0 1848 aa19.88■□□□□ 0.77
TRAPPC4-202ENST00000434101 SPHKAPQ2M3C7 1700 aa19.86■□□□□ 0.77
TRAPPC4-202ENST00000434101 LTKP29376 864 aa19.86■□□□□ 0.77
TRAPPC4-202ENST00000434101 CPS1P31327 1500 aa19.86■□□□□ 0.77
TRAPPC4-202ENST00000434101 TMEM131LA2VDJ0 1609 aa19.84■□□□□ 0.77
TRAPPC4-202ENST00000434101 TRIM52Q96A61 297 aa19.82■□□□□ 0.76
TRAPPC4-202ENST00000434101 HDGFP51858 240 aaKnown RBP19.81■□□□□ 0.76
TRAPPC4-202ENST00000434101 CHGAP10645 457 aaKnown RBP19.8■□□□□ 0.76
TRAPPC4-202ENST00000434101 STRCP1A6NGW2 1772 aa19.78■□□□□ 0.76
TRAPPC4-202ENST00000434101 ZFYVE9O95405 1425 aa19.77■□□□□ 0.76
TRAPPC4-202ENST00000434101 RIMS2Q9UQ26 1411 aa19.77■□□□□ 0.76
TRAPPC4-202ENST00000434101 PPP1R15AO75807 674 aaPredicted RBP19.76■□□□□ 0.75
TRAPPC4-202ENST00000434101 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms