RNA–Protein interactions for RNA: ENST00000433480.2

LINC00441-201, humanhuman

TSL 1 (best) BASIC

Gene LINC00441, Length 1,143 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00441-201ENST00000433480 PTPRKQ15262 1439 aa21.84■■□□□ 1.09
LINC00441-201ENST00000433480 GGT6Q6P531 493 aa21.84■■□□□ 1.09
LINC00441-201ENST00000433480 PPP6R1Q9UPN7 881 aa21.83■■□□□ 1.09
LINC00441-201ENST00000433480 MBD5Q9P267 1494 aa21.83■■□□□ 1.08
LINC00441-201ENST00000433480 NCKAP5LQ9HCH0 1330 aa21.82■■□□□ 1.08
LINC00441-201ENST00000433480 PTPN23Q9H3S7 1636 aa21.82■■□□□ 1.08
LINC00441-201ENST00000433480 PLA2R1Q13018 1463 aa21.82■■□□□ 1.08
LINC00441-201ENST00000433480 CEP170BQ9Y4F5 1589 aaPredicted RBP21.81■■□□□ 1.08
LINC00441-201ENST00000433480 PKD2Q13563 968 aa21.79■■□□□ 1.08
LINC00441-201ENST00000433480 RTEL1-TNFRSF6BF6WH68 1400 aa21.79■■□□□ 1.08
LINC00441-201ENST00000433480 ILDR2Q71H61 639 aa21.78■■□□□ 1.08
LINC00441-201ENST00000433480 ZNF335Q9H4Z2 1342 aaPredicted RBP21.77■■□□□ 1.07
LINC00441-201ENST00000433480 CCDC141Q6ZP82 1450 aa21.77■■□□□ 1.07
LINC00441-201ENST00000433480 ARHGEF5Q12774 1597 aa21.76■■□□□ 1.07
LINC00441-201ENST00000433480 SPATA31D1Q6ZQQ2 1576 aa21.75■■□□□ 1.07
LINC00441-201ENST00000433480 DHX29Q7Z478 1369 aaKnown RBP21.74■■□□□ 1.07
LINC00441-201ENST00000433480 ABCC5O15440 1437 aa21.74■■□□□ 1.07
LINC00441-201ENST00000433480 DAPK1P53355 1430 aa21.73■■□□□ 1.07
LINC00441-201ENST00000433480 TRIM26Q12899 539 aaPredicted RBP21.73■■□□□ 1.07
LINC00441-201ENST00000433480 A2ML1A8K2U0 1454 aa21.72■■□□□ 1.07
LINC00441-201ENST00000433480 SOCS7O14512 581 aa21.71■■□□□ 1.07
LINC00441-201ENST00000433480 ITGAEP38570 1179 aa21.7■■□□□ 1.06
LINC00441-201ENST00000433480 DNMT1P26358 1616 aaKnown RBP21.69■■□□□ 1.06
LINC00441-201ENST00000433480 UBAP1LF5GYI3 381 aa21.69■■□□□ 1.06
LINC00441-201ENST00000433480 SHANK2Q9UPX8 1470 aa21.69■■□□□ 1.06
LINC00441-201ENST00000433480 FAM135AQ9P2D6 1515 aa21.68■■□□□ 1.06
LINC00441-201ENST00000433480 ANKRD30AQ9BXX3 1397 aa21.67■■□□□ 1.06
LINC00441-201ENST00000433480 KIF3BO15066 747 aa21.67■■□□□ 1.06
LINC00441-201ENST00000433480 TNRQ92752 1358 aa21.66■■□□□ 1.06
LINC00441-201ENST00000433480 CHIC2Q9UKJ5 165 aa21.66■■□□□ 1.06
LINC00441-201ENST00000433480 KDM5DQ9BY66 1539 aa21.65■■□□□ 1.06
LINC00441-201ENST00000433480 ROCK1Q13464 1354 aa21.65■■□□□ 1.06
LINC00441-201ENST00000433480 PZPP20742 1482 aa21.64■■□□□ 1.06
LINC00441-201ENST00000433480 FBXO31Q5XUX0 539 aaPredicted RBP21.64■■□□□ 1.05
LINC00441-201ENST00000433480 POLR1AO95602 1720 aaPredicted RBP21.63■■□□□ 1.05
LINC00441-201ENST00000433480 WASHC2CQ9Y4E1 1318 aa21.61■■□□□ 1.05
LINC00441-201ENST00000433480 RRP7BPQ9NSQ0 103 aa21.61■■□□□ 1.05
LINC00441-201ENST00000433480 MAST1Q9Y2H9 1570 aa21.61■■□□□ 1.05
LINC00441-201ENST00000433480 NEURL4Q96JN8 1562 aa21.6■■□□□ 1.05
LINC00441-201ENST00000433480 ADGRL2O95490 1459 aa21.59■■□□□ 1.05
LINC00441-201ENST00000433480 CPS1P31327 1500 aa21.57■■□□□ 1.04
LINC00441-201ENST00000433480 KIF15Q9NS87 1388 aa21.57■■□□□ 1.04
LINC00441-201ENST00000433480 THEMISQ8N1K5 641 aaPredicted RBP21.56■■□□□ 1.04
LINC00441-201ENST00000433480 NLRP1Q9C000 1473 aa21.56■■□□□ 1.04
LINC00441-201ENST00000433480 ANKLE2Q86XL3 938 aa21.55■■□□□ 1.04
LINC00441-201ENST00000433480 ACIN1Q9UKV3 1341 aaKnown RBP21.55■■□□□ 1.04
LINC00441-201ENST00000433480 UGGT1Q9NYU2 1555 aa21.53■■□□□ 1.04
LINC00441-201ENST00000433480 CROCC2H7BZ55 1655 aa21.52■■□□□ 1.04
LINC00441-201ENST00000433480 RNF17Q9BXT8 1623 aaKnown RBP21.51■■□□□ 1.03
LINC00441-201ENST00000433480 MED14O60244 1454 aa21.51■■□□□ 1.03
LINC00441-201ENST00000433480 DEPDC5O75140 1603 aa21.51■■□□□ 1.03
LINC00441-201ENST00000433480 DUOX2Q9NRD8 1548 aa21.5■■□□□ 1.03
LINC00441-201ENST00000433480 HFM1A2PYH4 1435 aa21.5■■□□□ 1.03
LINC00441-201ENST00000433480 TOM1O60784 492 aa21.5■■□□□ 1.03
LINC00441-201ENST00000433480 VWDEQ8N2E2 1590 aa21.49■■□□□ 1.03
LINC00441-201ENST00000433480 NPHP4O75161 1426 aaPredicted RBP21.49■■□□□ 1.03
LINC00441-201ENST00000433480 ZC3H13Q5T200 1668 aaKnown RBP21.49■■□□□ 1.03
LINC00441-201ENST00000433480 SCAF1Q9H7N4 1312 aaKnown RBP21.49■■□□□ 1.03
LINC00441-201ENST00000433480 ERBINQ96RT1 1412 aa21.48■■□□□ 1.03
LINC00441-201ENST00000433480 ANKRD50Q9ULJ7 1429 aa21.48■■□□□ 1.03
LINC00441-201ENST00000433480 PIP4K2BP78356 416 aa21.48■■□□□ 1.03
LINC00441-201ENST00000433480 ABCC3O15438 1527 aa21.48■■□□□ 1.03
LINC00441-201ENST00000433480 EIF2AK4Q9P2K8 1649 aaKnown RBP21.47■■□□□ 1.03
LINC00441-201ENST00000433480 HSPA1LP34931 641 aa21.47■■□□□ 1.03
LINC00441-201ENST00000433480 NAIPQ13075 1403 aa21.46■■□□□ 1.03
LINC00441-201ENST00000433480 HRCP23327 699 aa21.45■■□□□ 1.02
LINC00441-201ENST00000433480 SETD5Q9C0A6 1442 aa21.44■■□□□ 1.02
LINC00441-201ENST00000433480 ERVK-7P63135 1459 aa21.44■■□□□ 1.02
LINC00441-201ENST00000433480 IQGAP1P46940 1657 aa21.44■■□□□ 1.02
LINC00441-201ENST00000433480 MROH1Q8NDA8 1641 aa21.42■■□□□ 1.02
LINC00441-201ENST00000433480 PCGF6Q9BYE7 350 aa21.42■■□□□ 1.02
LINC00441-201ENST00000433480 MED1Q15648 1581 aaPredicted RBP21.4■■□□□ 1.02
LINC00441-201ENST00000433480 CEP152O94986 1710 aa21.38■■□□□ 1.01
LINC00441-201ENST00000433480 ALKQ9UM73 1620 aa21.38■■□□□ 1.01
LINC00441-201ENST00000433480 KANK1Q14678 1352 aa21.36■■□□□ 1.01
LINC00441-201ENST00000433480 STRCP1A6NGW2 1772 aa21.36■■□□□ 1.01
LINC00441-201ENST00000433480 UBR1Q8IWV7 1749 aa21.36■■□□□ 1.01
LINC00441-201ENST00000433480 LRRC7Q96NW7 1537 aa21.35■■□□□ 1.01
LINC00441-201ENST00000433480 SYNMO15061 1565 aa21.35■■□□□ 1.01
LINC00441-201ENST00000433480 CFAP65Q6ZU64 1925 aaKnown RBP21.33■■□□□ 1.01
LINC00441-201ENST00000433480 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.33■■□□□ 1.01
LINC00441-201ENST00000433480 RAB3GAP2Q9H2M9 1393 aa21.33■■□□□ 1
LINC00441-201ENST00000433480 ARHGAP31Q2M1Z3 1444 aa21.32■■□□□ 1
LINC00441-201ENST00000433480 TRIM52Q96A61 297 aa21.32■■□□□ 1
LINC00441-201ENST00000433480 PRDM15P57071 1507 aaPredicted RBP21.32■■□□□ 1
LINC00441-201ENST00000433480 SCAF11Q99590 1463 aaKnown RBP21.32■■□□□ 1
LINC00441-201ENST00000433480 ARHGAP23Q9P227 1491 aa21.31■■□□□ 1
LINC00441-201ENST00000433480 SLIT1O75093 1534 aa21.3■■□□□ 1
LINC00441-201ENST00000433480 NUP155O75694 1391 aa21.3■■□□□ 1
LINC00441-201ENST00000433480 GCC2Q8IWJ2 1684 aa21.29■■□□□ 1
LINC00441-201ENST00000433480 LTKP29376 864 aa21.27■■□□□ 1
LINC00441-201ENST00000433480 TXNDC2Q86VQ3 553 aa21.27■■□□□ 1
LINC00441-201ENST00000433480 PHF23Q9BUL5 403 aaPredicted RBP21.25■□□□□ 0.99
LINC00441-201ENST00000433480 EID1Q9Y6B2 187 aa21.24■□□□□ 0.99
LINC00441-201ENST00000433480 PIK3C2BO00750 1634 aa21.23■□□□□ 0.99
LINC00441-201ENST00000433480 SLC4A1APQ9BWU0 796 aaKnown RBP21.22■□□□□ 0.99
LINC00441-201ENST00000433480 SENP3Q9H4L4 574 aaPredicted RBP21.21■□□□□ 0.99
LINC00441-201ENST00000433480 TMEM2Q9UHN6 1383 aa21.21■□□□□ 0.99
LINC00441-201ENST00000433480 MPHOSPH9Q99550 1183 aa21.2■□□□□ 0.98
LINC00441-201ENST00000433480 LMTK2Q8IWU2 1503 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms