RNA–Protein interactions for RNA: ENST00000433463.1

POLR2B-204, Transcript of RNA polymerase II subunit B, humanhuman

TSL 3

Gene POLR2B, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-204ENST00000433463 FAM135AQ9P2D6 1515 aa36.54■■■■□ 3.44
POLR2B-204ENST00000433463 KDM5DQ9BY66 1539 aa36.53■■■■□ 3.44
POLR2B-204ENST00000433463 MAST1Q9Y2H9 1570 aa36.53■■■■□ 3.44
POLR2B-204ENST00000433463 CEP170BQ9Y4F5 1589 aaPredicted RBP36.52■■■■□ 3.44
POLR2B-204ENST00000433463 NCKAP5LQ9HCH0 1330 aa36.51■■■■□ 3.43
POLR2B-204ENST00000433463 ZNF142P52746 1687 aaPredicted RBP36.51■■■■□ 3.43
POLR2B-204ENST00000433463 PKD2Q13563 968 aa36.5■■■■□ 3.43
POLR2B-204ENST00000433463 FBXO31Q5XUX0 539 aaPredicted RBP36.48■■■■□ 3.43
POLR2B-204ENST00000433463 PLA2R1Q13018 1463 aa36.46■■■■□ 3.43
POLR2B-204ENST00000433463 TNRQ92752 1358 aa36.46■■■■□ 3.43
POLR2B-204ENST00000433463 PZPP20742 1482 aa36.45■■■■□ 3.43
POLR2B-204ENST00000433463 A2ML1A8K2U0 1454 aa36.44■■■■□ 3.42
POLR2B-204ENST00000433463 PTPN23Q9H3S7 1636 aa36.37■■■■□ 3.41
POLR2B-204ENST00000433463 RNF17Q9BXT8 1623 aaKnown RBP36.36■■■■□ 3.41
POLR2B-204ENST00000433463 EIF2AK4Q9P2K8 1649 aaKnown RBP36.36■■■■□ 3.41
POLR2B-204ENST00000433463 TCOF1Q13428 1488 aaKnown RBP36.36■■■■□ 3.41
POLR2B-204ENST00000433463 DUOX2Q9NRD8 1548 aa36.35■■■■□ 3.41
POLR2B-204ENST00000433463 DNMT1P26358 1616 aaKnown RBP36.35■■■■□ 3.41
POLR2B-204ENST00000433463 ABCC5O15440 1437 aa36.34■■■■□ 3.41
POLR2B-204ENST00000433463 LTBP4Q8N2S1 1624 aa36.33■■■■□ 3.41
POLR2B-204ENST00000433463 FGD6Q6ZV73 1430 aa36.33■■■■□ 3.41
POLR2B-204ENST00000433463 RRP7BPQ9NSQ0 103 aa36.32■■■■□ 3.4
POLR2B-204ENST00000433463 SHANK2Q9UPX8 1470 aa36.31■■■■□ 3.4
POLR2B-204ENST00000433463 KIF15Q9NS87 1388 aa36.31■■■■□ 3.4
POLR2B-204ENST00000433463 THEMISQ8N1K5 641 aaPredicted RBP36.31■■■■□ 3.4
POLR2B-204ENST00000433463 NLRP1Q9C000 1473 aa36.29■■■■□ 3.4
POLR2B-204ENST00000433463 ZC3H13Q5T200 1668 aaKnown RBP36.29■■■■□ 3.4
POLR2B-204ENST00000433463 ABCC3O15438 1527 aa36.29■■■■□ 3.4
POLR2B-204ENST00000433463 DAPK1P53355 1430 aa36.27■■■■□ 3.4
POLR2B-204ENST00000433463 ZNF335Q9H4Z2 1342 aaPredicted RBP36.27■■■■□ 3.4
POLR2B-204ENST00000433463 ANKLE2Q86XL3 938 aa36.25■■■■□ 3.39
POLR2B-204ENST00000433463 CROCC2H7BZ55 1655 aa36.25■■■■□ 3.39
POLR2B-204ENST00000433463 IQSEC2Q5JU85 1478 aa36.24■■■■□ 3.39
POLR2B-204ENST00000433463 ERBINQ96RT1 1412 aa36.23■■■■□ 3.39
POLR2B-204ENST00000433463 CHIC2Q9UKJ5 165 aa36.21■■■■□ 3.39
POLR2B-204ENST00000433463 UGGT1Q9NYU2 1555 aa36.2■■■■□ 3.39
POLR2B-204ENST00000433463 ANKRD30AQ9BXX3 1397 aa36.2■■■■□ 3.39
POLR2B-204ENST00000433463 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.2■■■■□ 3.39
POLR2B-204ENST00000433463 MROH1Q8NDA8 1641 aa36.19■■■■□ 3.38
POLR2B-204ENST00000433463 GRWD1Q9BQ67 446 aaKnown RBP eCLIP36.18■■■■□ 3.382e-6■■■■□ 20.5
POLR2B-204ENST00000433463 SPATA31D1Q6ZQQ2 1576 aa36.16■■■■□ 3.38
POLR2B-204ENST00000433463 CEP152O94986 1710 aa36.15■■■■□ 3.38
POLR2B-204ENST00000433463 POLR1AO95602 1720 aaPredicted RBP36.15■■■■□ 3.38
POLR2B-204ENST00000433463 FAM50AQ14320 339 aaKnown RBP36.15■■■■□ 3.38
POLR2B-204ENST00000433463 ERVK-7P63135 1459 aa36.15■■■■□ 3.38
POLR2B-204ENST00000433463 KANK1Q14678 1352 aa36.15■■■■□ 3.38
POLR2B-204ENST00000433463 CFAP65Q6ZU64 1925 aaKnown RBP36.13■■■■□ 3.37
POLR2B-204ENST00000433463 PRDM15P57071 1507 aaPredicted RBP36.1■■■■□ 3.37
POLR2B-204ENST00000433463 ARHGAP31Q2M1Z3 1444 aa36.08■■■■□ 3.37
POLR2B-204ENST00000433463 NEURL4Q96JN8 1562 aa36.07■■■■□ 3.37
POLR2B-204ENST00000433463 UBAP1LF5GYI3 381 aa36.06■■■■□ 3.36
POLR2B-204ENST00000433463 NPHP4O75161 1426 aaPredicted RBP36.04■■■■□ 3.36
POLR2B-204ENST00000433463 DEPDC5O75140 1603 aa36.02■■■■□ 3.36
POLR2B-204ENST00000433463 MED14O60244 1454 aa36.01■■■■□ 3.36
POLR2B-204ENST00000433463 ADGRL2O95490 1459 aa35.98■■■■□ 3.35
POLR2B-204ENST00000433463 CPS1P31327 1500 aa35.98■■■■□ 3.35
POLR2B-204ENST00000433463 STAG3Q9UJ98 1225 aa35.94■■■■□ 3.34
POLR2B-204ENST00000433463 UBR1Q8IWV7 1749 aa35.92■■■■□ 3.34
POLR2B-204ENST00000433463 IQGAP1P46940 1657 aa35.91■■■■□ 3.34
POLR2B-204ENST00000433463 LMTK2Q8IWU2 1503 aa35.91■■■■□ 3.34
POLR2B-204ENST00000433463 TXNDC2Q86VQ3 553 aa35.9■■■■□ 3.34
POLR2B-204ENST00000433463 EID1Q9Y6B2 187 aa35.9■■■■□ 3.34
POLR2B-204ENST00000433463 ANKRD50Q9ULJ7 1429 aa35.9■■■■□ 3.34
POLR2B-204ENST00000433463 TOM1O60784 492 aa35.87■■■■□ 3.33
POLR2B-204ENST00000433463 VWDEQ8N2E2 1590 aa35.87■■■■□ 3.33
POLR2B-204ENST00000433463 SCAF11Q99590 1463 aaKnown RBP35.86■■■■□ 3.33
POLR2B-204ENST00000433463 LTKP29376 864 aa35.83■■■■□ 3.33
POLR2B-204ENST00000433463 DISP3Q9P2K9 1392 aa35.82■■■■□ 3.32
POLR2B-204ENST00000433463 IDI1Q13907 227 aa35.82■■■■□ 3.32
POLR2B-204ENST00000433463 SLIT1O75093 1534 aa35.82■■■■□ 3.32
POLR2B-204ENST00000433463 SCAF1Q9H7N4 1312 aaKnown RBP35.82■■■■□ 3.32
POLR2B-204ENST00000433463 ARHGAP23Q9P227 1491 aa35.81■■■■□ 3.32
POLR2B-204ENST00000433463 PIK3C2BO00750 1634 aa35.8■■■■□ 3.32
POLR2B-204ENST00000433463 EFCAB6Q5THR3 1501 aa35.78■■■■□ 3.32
POLR2B-204ENST00000433463 TMEM2Q9UHN6 1383 aa35.77■■■■□ 3.32
POLR2B-204ENST00000433463 PIP4K2BP78356 416 aa35.77■■■■□ 3.32
POLR2B-204ENST00000433463 SLC52A1Q9NWF4 448 aa35.77■■■■□ 3.32
POLR2B-204ENST00000433463 PPARGC1BQ86YN6 1023 aaKnown RBP35.76■■■■□ 3.32
POLR2B-204ENST00000433463 NOS1P29475 1434 aa35.75■■■■□ 3.31
POLR2B-204ENST00000433463 ROCK1Q13464 1354 aa35.74■■■■□ 3.31
POLR2B-204ENST00000433463 ITGAEP38570 1179 aa35.72■■■■□ 3.31
POLR2B-204ENST00000433463 RPRD2Q5VT52 1461 aaKnown RBP35.72■■■■□ 3.31
POLR2B-204ENST00000433463 KDM5AP29375 1690 aaKnown RBP35.71■■■■□ 3.31
POLR2B-204ENST00000433463 SYNMO15061 1565 aa35.7■■■■□ 3.31
POLR2B-204ENST00000433463 LRRC7Q96NW7 1537 aa35.66■■■■□ 3.3
POLR2B-204ENST00000433463 STRCP1A6NGW2 1772 aa35.65■■■■□ 3.3
POLR2B-204ENST00000433463 TET3O43151 1660 aa35.65■■■■□ 3.3
POLR2B-204ENST00000433463 ADGRB3O60242 1522 aa35.62■■■■□ 3.29
POLR2B-204ENST00000433463 UNC13BO14795 1591 aa35.61■■■■□ 3.29
POLR2B-204ENST00000433463 HSPA1LP34931 641 aa35.61■■■■□ 3.29
POLR2B-204ENST00000433463 BCANQ96GW7 911 aa35.6■■■■□ 3.29
POLR2B-204ENST00000433463 HDGFP51858 240 aaKnown RBP35.59■■■■□ 3.29
POLR2B-204ENST00000433463 GCC2Q8IWJ2 1684 aa35.58■■■■□ 3.29
POLR2B-204ENST00000433463 NUP155O75694 1391 aa35.55■■■■□ 3.28
POLR2B-204ENST00000433463 SLC26A8Q96RN1 970 aa35.55■■■■□ 3.28
POLR2B-204ENST00000433463 CHGAP10645 457 aaKnown RBP35.53■■■■□ 3.28
POLR2B-204ENST00000433463 PPP1R15AO75807 674 aaPredicted RBP35.51■■■■□ 3.28
POLR2B-204ENST00000433463 KCNA6P17658 529 aa35.51■■■■□ 3.28
POLR2B-204ENST00000433463 ILDR2Q71H61 639 aa35.51■■■■□ 3.28
POLR2B-204ENST00000433463 IQGAP3Q86VI3 1631 aa35.49■■■■□ 3.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms