RNA–Protein interactions for RNA: ENST00000433454.3

NEFM-202, Transcript of neurofilament medium, humanhuman

TSL 2 BASIC

Gene NEFM, Length 2,519 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-202ENST00000433454 PKD2Q13563 968 aa15.31■□□□□ 0.04
NEFM-202ENST00000433454 DHX29Q7Z478 1369 aaKnown RBP15.3■□□□□ 0.04
NEFM-202ENST00000433454 DEPDC5O75140 1603 aa15.3■□□□□ 0.04
NEFM-202ENST00000433454 RAPGEF3O95398 923 aa15.29■□□□□ 0.04
NEFM-202ENST00000433454 ABCA6Q8N139 1617 aa15.28■□□□□ 0.04
NEFM-202ENST00000433454 FRMPD1Q5SYB0 1578 aa15.28■□□□□ 0.04
NEFM-202ENST00000433454 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.28■□□□□ 0.04
NEFM-202ENST00000433454 A2MP01023 1474 aa15.28■□□□□ 0.04
NEFM-202ENST00000433454 RPRD2Q5VT52 1461 aaKnown RBP15.28■□□□□ 0.04
NEFM-202ENST00000433454 ZMYM4Q5VZL5 1548 aa15.27■□□□□ 0.03
NEFM-202ENST00000433454 PRDM15P57071 1507 aaPredicted RBP15.25■□□□□ 0.03
NEFM-202ENST00000433454 DIP2CQ9Y2E4 1556 aa15.25■□□□□ 0.03
NEFM-202ENST00000433454 KIF3BO15066 747 aa15.23■□□□□ 0.03
NEFM-202ENST00000433454 KANK1Q14678 1352 aa15.23■□□□□ 0.03
NEFM-202ENST00000433454 RNF17Q9BXT8 1623 aaKnown RBP15.23■□□□□ 0.03
NEFM-202ENST00000433454 BCORL1Q5H9F3 1711 aa15.23■□□□□ 0.03
NEFM-202ENST00000433454 MROH1Q8NDA8 1641 aa15.23■□□□□ 0.03
NEFM-202ENST00000433454 VWDEQ8N2E2 1590 aa15.22■□□□□ 0.03
NEFM-202ENST00000433454 PPP1R15AO75807 674 aaPredicted RBP15.21■□□□□ 0.03
NEFM-202ENST00000433454 DNAJC5Q9H3Z4 198 aa15.21■□□□□ 0.03
NEFM-202ENST00000433454 TET3O43151 1660 aa15.21■□□□□ 0.02
NEFM-202ENST00000433454 YEATS2Q9ULM3 1422 aa15.2■□□□□ 0.02
NEFM-202ENST00000433454 ZNF316A6NFI3 1004 aaPredicted RBP15.19■□□□□ 0.02
NEFM-202ENST00000433454 E9PCH4 1651 aa15.18■□□□□ 0.02
NEFM-202ENST00000433454 ATP10AO60312 1499 aa15.17■□□□□ 0.02
NEFM-202ENST00000433454 CCDC144AA2RUR9 1427 aa15.17■□□□□ 0.02
NEFM-202ENST00000433454 L3MBTL2Q969R5 705 aa15.16■□□□□ 0.02
NEFM-202ENST00000433454 PLA2R1Q13018 1463 aa15.15■□□□□ 0.02
NEFM-202ENST00000433454 LMTK2Q8IWU2 1503 aa15.15■□□□□ 0.02
NEFM-202ENST00000433454 COL17A1Q9UMD9 1497 aaPredicted RBP15.15■□□□□ 0.02
NEFM-202ENST00000433454 EFCAB6Q5THR3 1501 aa15.15■□□□□ 0.02
NEFM-202ENST00000433454 REREQ9P2R6 1566 aa15.14■□□□□ 0.02
NEFM-202ENST00000433454 CEP152O94986 1710 aa15.14■□□□□ 0.01
NEFM-202ENST00000433454 SPHKAPQ2M3C7 1700 aa15.13■□□□□ 0.01
NEFM-202ENST00000433454 ARHGEF40Q8TER5 1519 aa15.13■□□□□ 0.01
NEFM-202ENST00000433454 TRPM2O94759 1503 aa15.13■□□□□ 0.01
NEFM-202ENST00000433454 GGT6Q6P531 493 aa15.12■□□□□ 0.01
NEFM-202ENST00000433454 ABCC3O15438 1527 aa15.11■□□□□ 0.01
NEFM-202ENST00000433454 PTPRTO14522 1441 aa15.1■□□□□ 0.01
NEFM-202ENST00000433454 TRHP20396 242 aaPredicted RBP15.1■□□□□ 0.01
NEFM-202ENST00000433454 ZC3H13Q5T200 1668 aaKnown RBP15.1■□□□□ 0.01
NEFM-202ENST00000433454 AGLP35573 1532 aa15.09■□□□□ 0.01
NEFM-202ENST00000433454 WASHC2CQ9Y4E1 1318 aa15.08■□□□□ 0
NEFM-202ENST00000433454 CAMSAP1Q5T5Y3 1602 aa15.08■□□□□ 0
NEFM-202ENST00000433454 CLTCL1P53675 1640 aa15.06■□□□□ 0
NEFM-202ENST00000433454 NPATQ14207 1427 aa15.05■□□□□ -0
NEFM-202ENST00000433454 UHRF1BP1Q6BDS2 1440 aa15.04■□□□□ -0
NEFM-202ENST00000433454 SIGLEC1Q9BZZ2 1709 aa15.03■□□□□ -0
NEFM-202ENST00000433454 NBPF8Q3BBV2 869 aa15.03■□□□□ -0
NEFM-202ENST00000433454 SPATA31E1Q6ZUB1 1445 aa15.02■□□□□ -0
NEFM-202ENST00000433454 ARHGAP31Q2M1Z3 1444 aa15.02□□□□□ -0.01
NEFM-202ENST00000433454 DIEXFQ68CQ4 756 aaKnown RBP15.02□□□□□ -0.01
NEFM-202ENST00000433454 DCAF11Q8TEB1 546 aa15.01□□□□□ -0.01
NEFM-202ENST00000433454 NEURL4Q96JN8 1562 aa15.01□□□□□ -0.01
NEFM-202ENST00000433454 CNTLNQ9NXG0 1405 aa15.01□□□□□ -0.01
NEFM-202ENST00000433454 RGL3Q3MIN7 710 aa15.01□□□□□ -0.01
NEFM-202ENST00000433454 ZNF326Q5BKZ1 582 aaKnown RBP15□□□□□ -0.01
NEFM-202ENST00000433454 PPP6R1Q9UPN7 881 aa15□□□□□ -0.01
NEFM-202ENST00000433454 UGGT1Q9NYU2 1555 aa15□□□□□ -0.01
NEFM-202ENST00000433454 KIF1BO60333 1816 aa14.99□□□□□ -0.01
NEFM-202ENST00000433454 RALGAPBQ86X10 1494 aa14.99□□□□□ -0.01
NEFM-202ENST00000433454 CFAP65Q6ZU64 1925 aaKnown RBP14.98□□□□□ -0.01
NEFM-202ENST00000433454 KDM2AQ9Y2K7 1162 aa14.98□□□□□ -0.01
NEFM-202ENST00000433454 NOS1P29475 1434 aa14.98□□□□□ -0.01
NEFM-202ENST00000433454 PRAG1Q86YV5 1406 aa14.97□□□□□ -0.01
NEFM-202ENST00000433454 CLTCQ00610 1675 aaKnown RBP14.96□□□□□ -0.01
NEFM-202ENST00000433454 EIF4G2P78344 907 aaKnown RBP eCLIP14.96□□□□□ -0.02
NEFM-202ENST00000433454 PREX1Q8TCU6 1659 aa14.95□□□□□ -0.02
NEFM-202ENST00000433454 SYNMO15061 1565 aa14.95□□□□□ -0.02
NEFM-202ENST00000433454 ADGRB3O60242 1522 aa14.94□□□□□ -0.02
NEFM-202ENST00000433454 PIK3C2BO00750 1634 aa14.94□□□□□ -0.02
NEFM-202ENST00000433454 TRPM1Q7Z4N2 1603 aa14.94□□□□□ -0.02
NEFM-202ENST00000433454 HIRIP3Q9BW71 556 aaPredicted RBP14.94□□□□□ -0.02
NEFM-202ENST00000433454 MROH2AA6NES4 1674 aa14.93□□□□□ -0.02
NEFM-202ENST00000433454 MLECQ14165 292 aa14.93□□□□□ -0.02
NEFM-202ENST00000433454 STAC3Q96MF2 364 aa14.93□□□□□ -0.02
NEFM-202ENST00000433454 ARID4BQ4LE39 1312 aaPredicted RBP14.93□□□□□ -0.02
NEFM-202ENST00000433454 HSPA5P11021 654 aaKnown RBP14.93□□□□□ -0.02
NEFM-202ENST00000433454 MADDQ8WXG6 1647 aa14.92□□□□□ -0.02
NEFM-202ENST00000433454 ROCK2O75116 1388 aaKnown RBP14.91□□□□□ -0.02
NEFM-202ENST00000433454 ERVK-7P63135 1459 aa14.91□□□□□ -0.02
NEFM-202ENST00000433454 IFT172Q9UG01 1749 aa14.9□□□□□ -0.02
NEFM-202ENST00000433454 ESF1Q9H501 851 aaKnown RBP14.9□□□□□ -0.02
NEFM-202ENST00000433454 USP47Q96K76 1375 aa14.9□□□□□ -0.02
NEFM-202ENST00000433454 MYOM2P54296 1465 aa14.9□□□□□ -0.02
NEFM-202ENST00000433454 CARD11Q9BXL7 1154 aa14.89□□□□□ -0.03
NEFM-202ENST00000433454 SLC52A1Q9NWF4 448 aa14.89□□□□□ -0.03
NEFM-202ENST00000433454 LAMC1P11047 1609 aa14.88□□□□□ -0.03
NEFM-202ENST00000433454 CHGAP10645 457 aaKnown RBP14.88□□□□□ -0.03
NEFM-202ENST00000433454 GPRASP1Q5JY77 1395 aa14.88□□□□□ -0.03
NEFM-202ENST00000433454 SPATA31D1Q6ZQQ2 1576 aa14.88□□□□□ -0.03
NEFM-202ENST00000433454 PPLO60437 1756 aa14.86□□□□□ -0.03
NEFM-202ENST00000433454 FBXO31Q5XUX0 539 aaPredicted RBP14.86□□□□□ -0.03
NEFM-202ENST00000433454 KIAA1210Q9ULL0 1709 aa14.85□□□□□ -0.03
NEFM-202ENST00000433454 IDI1Q13907 227 aa14.85□□□□□ -0.03
NEFM-202ENST00000433454 RPGRIP1LQ68CZ1 1315 aa14.84□□□□□ -0.03
NEFM-202ENST00000433454 ZMYM3Q14202 1370 aa14.84□□□□□ -0.03
NEFM-202ENST00000433454 NRXN1Q9ULB1 1477 aa14.84□□□□□ -0.03
NEFM-202ENST00000433454 POLR1AO95602 1720 aaPredicted RBP14.84□□□□□ -0.03
NEFM-202ENST00000433454 TMEM131LA2VDJ0 1609 aa14.83□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms