RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 RIMS1Q86UR5 1692 aaKnown RBP8.89□□□□□ -0.99
HMGB3P24-201ENST00000433260 CEBPAP49715 358 aaPredicted RBP8.89□□□□□ -0.99
HMGB3P24-201ENST00000433260 GGT6Q6P531 493 aa8.89□□□□□ -0.99
HMGB3P24-201ENST00000433260 CHIC2Q9UKJ5 165 aa8.89□□□□□ -0.99
HMGB3P24-201ENST00000433260 MADDQ8WXG6 1647 aa8.89□□□□□ -0.99
HMGB3P24-201ENST00000433260 ATP7AQ04656 1500 aa8.89□□□□□ -0.99
HMGB3P24-201ENST00000433260 SPDYE4A6NLX3 237 aa8.88□□□□□ -0.99
HMGB3P24-201ENST00000433260 ITGAEP38570 1179 aa8.88□□□□□ -0.99
HMGB3P24-201ENST00000433260 ESF1Q9H501 851 aaKnown RBP8.88□□□□□ -0.99
HMGB3P24-201ENST00000433260 MIA2Q96PC5 1412 aa8.88□□□□□ -0.99
HMGB3P24-201ENST00000433260 PTPN23Q9H3S7 1636 aa8.87□□□□□ -0.99
HMGB3P24-201ENST00000433260 CCDC141Q6ZP82 1450 aa8.87□□□□□ -0.99
HMGB3P24-201ENST00000433260 INO80Q9ULG1 1556 aaPredicted RBP8.86□□□□□ -0.99
HMGB3P24-201ENST00000433260 FER1L4A9Z1Z3 1794 aa8.86□□□□□ -0.99
HMGB3P24-201ENST00000433260 A2MP01023 1474 aa8.86□□□□□ -0.99
HMGB3P24-201ENST00000433260 PTPRMP28827 1452 aa8.86□□□□□ -0.99
HMGB3P24-201ENST00000433260 KIF3BO15066 747 aa8.86□□□□□ -0.99
HMGB3P24-201ENST00000433260 RRP7BPQ9NSQ0 103 aa8.86□□□□□ -0.99
HMGB3P24-201ENST00000433260 FGD6Q6ZV73 1430 aa8.86□□□□□ -0.99
HMGB3P24-201ENST00000433260 ADGBQ8N7X0 1667 aa8.85□□□□□ -0.99
HMGB3P24-201ENST00000433260 ARHGEF5Q12774 1597 aa8.85□□□□□ -0.99
HMGB3P24-201ENST00000433260 RTEL1-TNFRSF6BF6WH68 1400 aa8.84□□□□□ -0.99
HMGB3P24-201ENST00000433260 DHX29Q7Z478 1369 aaKnown RBP8.84□□□□□ -0.99
HMGB3P24-201ENST00000433260 ABCC5O15440 1437 aa8.83□□□□□ -1
HMGB3P24-201ENST00000433260 REREQ9P2R6 1566 aa8.82□□□□□ -1
HMGB3P24-201ENST00000433260 DAPK1P53355 1430 aa8.82□□□□□ -1
HMGB3P24-201ENST00000433260 AGLP35573 1532 aa8.82□□□□□ -1
HMGB3P24-201ENST00000433260 TCOF1Q13428 1488 aaKnown RBP8.82□□□□□ -1
HMGB3P24-201ENST00000433260 CLTCQ00610 1675 aaKnown RBP8.81□□□□□ -1
HMGB3P24-201ENST00000433260 DNMT1P26358 1616 aaKnown RBP8.8□□□□□ -1
HMGB3P24-201ENST00000433260 MAST1Q9Y2H9 1570 aa8.8□□□□□ -1
HMGB3P24-201ENST00000433260 CROCC2H7BZ55 1655 aa8.8□□□□□ -1
HMGB3P24-201ENST00000433260 WASHC2CQ9Y4E1 1318 aa8.8□□□□□ -1
HMGB3P24-201ENST00000433260 C3P01024 1663 aa8.79□□□□□ -1
HMGB3P24-201ENST00000433260 ZMYM3Q14202 1370 aa8.79□□□□□ -1
HMGB3P24-201ENST00000433260 HSPA2P54652 639 aa8.79□□□□□ -1
HMGB3P24-201ENST00000433260 PLXNC1O60486 1568 aa8.78□□□□□ -1
HMGB3P24-201ENST00000433260 CFAP65Q6ZU64 1925 aaKnown RBP8.78□□□□□ -1
HMGB3P24-201ENST00000433260 ANKRD30AQ9BXX3 1397 aa8.78□□□□□ -1
HMGB3P24-201ENST00000433260 KIF15Q9NS87 1388 aa8.77□□□□□ -1.01
HMGB3P24-201ENST00000433260 FBXO31Q5XUX0 539 aaPredicted RBP8.77□□□□□ -1.01
HMGB3P24-201ENST00000433260 PTPRKQ15262 1439 aa8.77□□□□□ -1.01
HMGB3P24-201ENST00000433260 DUOX2Q9NRD8 1548 aa8.76□□□□□ -1.01
HMGB3P24-201ENST00000433260 NCOA1Q15788 1441 aa8.76□□□□□ -1.01
HMGB3P24-201ENST00000433260 CNTLNQ9NXG0 1405 aa8.75□□□□□ -1.01
HMGB3P24-201ENST00000433260 SPDYE2BA6NHP3 402 aa8.75□□□□□ -1.01
HMGB3P24-201ENST00000433260 SPDYE6P0CI01 402 aa8.75□□□□□ -1.01
HMGB3P24-201ENST00000433260 SPDYE2Q495Y8 402 aa8.75□□□□□ -1.01
HMGB3P24-201ENST00000433260 SHANK2Q9UPX8 1470 aa8.75□□□□□ -1.01
HMGB3P24-201ENST00000433260 ZNF692Q9BU19 519 aaPredicted RBP8.74□□□□□ -1.01
HMGB3P24-201ENST00000433260 FBXO3Q9UK99 471 aa8.74□□□□□ -1.01
HMGB3P24-201ENST00000433260 CEP152O94986 1710 aa8.74□□□□□ -1.01
HMGB3P24-201ENST00000433260 SETD1BQ9UPS6 1966 aaKnown RBP8.73□□□□□ -1.01
HMGB3P24-201ENST00000433260 MROH2AA6NES4 1674 aa8.73□□□□□ -1.01
HMGB3P24-201ENST00000433260 PREX1Q8TCU6 1659 aa8.73□□□□□ -1.01
HMGB3P24-201ENST00000433260 EIF2AK4Q9P2K8 1649 aaKnown RBP8.72□□□□□ -1.01
HMGB3P24-201ENST00000433260 LMTK3Q96Q04 1460 aa8.72□□□□□ -1.01
HMGB3P24-201ENST00000433260 ERBINQ96RT1 1412 aa8.71□□□□□ -1.01
HMGB3P24-201ENST00000433260 RRBP1Q9P2E9 1410 aaKnown RBP8.71□□□□□ -1.01
HMGB3P24-201ENST00000433260 KANK1Q14678 1352 aa8.71□□□□□ -1.02
HMGB3P24-201ENST00000433260 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.71□□□□□ -1.02
HMGB3P24-201ENST00000433260 UHRF1BP1Q6BDS2 1440 aa8.71□□□□□ -1.02
HMGB3P24-201ENST00000433260 ANKRD50Q9ULJ7 1429 aa8.71□□□□□ -1.02
HMGB3P24-201ENST00000433260 ADGRL2O95490 1459 aa8.7□□□□□ -1.02
HMGB3P24-201ENST00000433260 KDM5DQ9BY66 1539 aa8.7□□□□□ -1.02
HMGB3P24-201ENST00000433260 RNF17Q9BXT8 1623 aaKnown RBP8.7□□□□□ -1.02
HMGB3P24-201ENST00000433260 MROH1Q8NDA8 1641 aa8.69□□□□□ -1.02
HMGB3P24-201ENST00000433260 ROCK1Q13464 1354 aa8.69□□□□□ -1.02
HMGB3P24-201ENST00000433260 ABCC3O15438 1527 aa8.69□□□□□ -1.02
HMGB3P24-201ENST00000433260 CAMSAP1Q5T5Y3 1602 aa8.69□□□□□ -1.02
HMGB3P24-201ENST00000433260 TRIM52Q96A61 297 aa8.68□□□□□ -1.02
HMGB3P24-201ENST00000433260 NCKAP5LQ9HCH0 1330 aa8.68□□□□□ -1.02
HMGB3P24-201ENST00000433260 TNRQ92752 1358 aa8.68□□□□□ -1.02
HMGB3P24-201ENST00000433260 NPATQ14207 1427 aa8.68□□□□□ -1.02
HMGB3P24-201ENST00000433260 ZC3H13Q5T200 1668 aaKnown RBP8.68□□□□□ -1.02
HMGB3P24-201ENST00000433260 NUP155O75694 1391 aa8.67□□□□□ -1.02
HMGB3P24-201ENST00000433260 PZPP20742 1482 aa8.67□□□□□ -1.02
HMGB3P24-201ENST00000433260 PROM2Q8N271 834 aa8.67□□□□□ -1.02
HMGB3P24-201ENST00000433260 DEPDC5O75140 1603 aa8.66□□□□□ -1.02
HMGB3P24-201ENST00000433260 MYO3AQ8NEV4 1616 aa8.66□□□□□ -1.02
HMGB3P24-201ENST00000433260 RBM42Q9BTD8 480 aaKnown RBP8.66□□□□□ -1.02
HMGB3P24-201ENST00000433260 STRCQ7RTU9 1775 aa8.66□□□□□ -1.02
HMGB3P24-201ENST00000433260 PRDM15P57071 1507 aaPredicted RBP8.65□□□□□ -1.02
HMGB3P24-201ENST00000433260 STAG3Q9UJ98 1225 aa8.65□□□□□ -1.02
HMGB3P24-201ENST00000433260 CEP170BQ9Y4F5 1589 aaPredicted RBP8.65□□□□□ -1.03
HMGB3P24-201ENST00000433260 IDI1Q13907 227 aa8.64□□□□□ -1.03
HMGB3P24-201ENST00000433260 THEMISQ8N1K5 641 aaPredicted RBP8.64□□□□□ -1.03
HMGB3P24-201ENST00000433260 SSUH2Q9Y2M2 353 aa8.64□□□□□ -1.03
HMGB3P24-201ENST00000433260 FAM135AQ9P2D6 1515 aa8.64□□□□□ -1.03
HMGB3P24-201ENST00000433260 A2ML1A8K2U0 1454 aa8.64□□□□□ -1.03
HMGB3P24-201ENST00000433260 NAIPQ13075 1403 aa8.63□□□□□ -1.03
HMGB3P24-201ENST00000433260 CHGAP10645 457 aaKnown RBP8.63□□□□□ -1.03
HMGB3P24-201ENST00000433260 ERVK-7P63135 1459 aa8.63□□□□□ -1.03
HMGB3P24-201ENST00000433260 UNC13BO14795 1591 aa8.62□□□□□ -1.03
HMGB3P24-201ENST00000433260 SPATA31D1Q6ZQQ2 1576 aa8.62□□□□□ -1.03
HMGB3P24-201ENST00000433260 VWDEQ8N2E2 1590 aa8.62□□□□□ -1.03
HMGB3P24-201ENST00000433260 GCC2Q8IWJ2 1684 aa8.62□□□□□ -1.03
HMGB3P24-201ENST00000433260 ARHGAP31Q2M1Z3 1444 aa8.62□□□□□ -1.03
HMGB3P24-201ENST00000433260 UGGT1Q9NYU2 1555 aa8.61□□□□□ -1.03
HMGB3P24-201ENST00000433260 LMTK2Q8IWU2 1503 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms