RNA–Protein interactions for RNA: ENST00000432213.1

SEC13-212, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 594 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-212ENST00000432213 A2ML1A8K2U0 1454 aa22.79■■□□□ 1.24
SEC13-212ENST00000432213 FBXO31Q5XUX0 539 aaPredicted RBP22.79■■□□□ 1.24
SEC13-212ENST00000432213 KANK4Q5T7N3 995 aaPredicted RBP22.78■■□□□ 1.24
SEC13-212ENST00000432213 RNF17Q9BXT8 1623 aaKnown RBP22.78■■□□□ 1.24
SEC13-212ENST00000432213 MAST1Q9Y2H9 1570 aa22.77■■□□□ 1.24
SEC13-212ENST00000432213 KIF3BO15066 747 aa22.77■■□□□ 1.24
SEC13-212ENST00000432213 MROH1Q8NDA8 1641 aa22.77■■□□□ 1.24
SEC13-212ENST00000432213 PZPP20742 1482 aa22.77■■□□□ 1.24
SEC13-212ENST00000432213 IQSEC2Q5JU85 1478 aa22.75■■□□□ 1.23
SEC13-212ENST00000432213 CEP152O94986 1710 aa22.75■■□□□ 1.23
SEC13-212ENST00000432213 FAM135AQ9P2D6 1515 aa22.72■■□□□ 1.23
SEC13-212ENST00000432213 PPP6R1Q9UPN7 881 aa22.72■■□□□ 1.23
SEC13-212ENST00000432213 TNRQ92752 1358 aa22.72■■□□□ 1.23
SEC13-212ENST00000432213 CROCC2H7BZ55 1655 aa22.71■■□□□ 1.23
SEC13-212ENST00000432213 CFAP65Q6ZU64 1925 aaKnown RBP22.71■■□□□ 1.23
SEC13-212ENST00000432213 ABCC3O15438 1527 aa22.71■■□□□ 1.23
SEC13-212ENST00000432213 SPATA31D1Q6ZQQ2 1576 aa22.7■■□□□ 1.22
SEC13-212ENST00000432213 EIF2AK4Q9P2K8 1649 aaKnown RBP22.69■■□□□ 1.22
SEC13-212ENST00000432213 MAP3K1Q13233 1512 aa22.69■■□□□ 1.22
SEC13-212ENST00000432213 ZC3H13Q5T200 1668 aaKnown RBP22.68■■□□□ 1.22
SEC13-212ENST00000432213 PKD2Q13563 968 aa22.68■■□□□ 1.22
SEC13-212ENST00000432213 ILDR2Q71H61 639 aa22.68■■□□□ 1.22
SEC13-212ENST00000432213 MYOM3Q5VTT5 1437 aa22.67■■□□□ 1.22
SEC13-212ENST00000432213 STRCP1A6NGW2 1772 aa22.66■■□□□ 1.22
SEC13-212ENST00000432213 VWDEQ8N2E2 1590 aa22.65■■□□□ 1.22
SEC13-212ENST00000432213 DISP3Q9P2K9 1392 aa22.64■■□□□ 1.22
SEC13-212ENST00000432213 WASHC2CQ9Y4E1 1318 aa22.64■■□□□ 1.22
SEC13-212ENST00000432213 RSPH4AQ5TD94 716 aa22.63■■□□□ 1.21
SEC13-212ENST00000432213 MIA2Q96PC5 1412 aa22.63■■□□□ 1.21
SEC13-212ENST00000432213 UGGT1Q9NYU2 1555 aa22.63■■□□□ 1.21
SEC13-212ENST00000432213 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.63■■□□□ 1.211e-6■■■■□ 25.4
SEC13-212ENST00000432213 PTPN23Q9H3S7 1636 aa22.62■■□□□ 1.21
SEC13-212ENST00000432213 DEPDC5O75140 1603 aa22.6■■□□□ 1.21
SEC13-212ENST00000432213 UBR1Q8IWV7 1749 aa22.6■■□□□ 1.21
SEC13-212ENST00000432213 IQGAP1P46940 1657 aa22.6■■□□□ 1.21
SEC13-212ENST00000432213 ALKQ9UM73 1620 aa22.6■■□□□ 1.21
SEC13-212ENST00000432213 ERVK-7P63135 1459 aa22.6■■□□□ 1.21
SEC13-212ENST00000432213 NLRP1Q9C000 1473 aa22.6■■□□□ 1.21
SEC13-212ENST00000432213 TSPY4P0CV99 314 aa22.59■■□□□ 1.21
SEC13-212ENST00000432213 TSPY10P0CW01 314 aa22.59■■□□□ 1.21
SEC13-212ENST00000432213 PRDM15P57071 1507 aaPredicted RBP22.57■■□□□ 1.2
SEC13-212ENST00000432213 DUOX2Q9NRD8 1548 aa22.57■■□□□ 1.2
SEC13-212ENST00000432213 ABCC5O15440 1437 aa22.57■■□□□ 1.2
SEC13-212ENST00000432213 SHANK2Q9UPX8 1470 aa22.56■■□□□ 1.2
SEC13-212ENST00000432213 UBAP1LF5GYI3 381 aa22.56■■□□□ 1.2
SEC13-212ENST00000432213 MED14O60244 1454 aa22.54■■□□□ 1.2
SEC13-212ENST00000432213 NPHP4O75161 1426 aaPredicted RBP22.53■■□□□ 1.2
SEC13-212ENST00000432213 CPS1P31327 1500 aa22.52■■□□□ 1.2
SEC13-212ENST00000432213 KIF15Q9NS87 1388 aa22.5■■□□□ 1.19
SEC13-212ENST00000432213 DAPK1P53355 1430 aa22.49■■□□□ 1.19
SEC13-212ENST00000432213 PIK3C2BO00750 1634 aa22.49■■□□□ 1.19
SEC13-212ENST00000432213 XIRP1Q702N8 1843 aaKnown RBP22.48■■□□□ 1.19
SEC13-212ENST00000432213 FGD6Q6ZV73 1430 aa22.48■■□□□ 1.19
SEC13-212ENST00000432213 ANKLE2Q86XL3 938 aa22.47■■□□□ 1.19
SEC13-212ENST00000432213 THEMISQ8N1K5 641 aaPredicted RBP22.45■■□□□ 1.18
SEC13-212ENST00000432213 RRP7BPQ9NSQ0 103 aa22.45■■□□□ 1.18
SEC13-212ENST00000432213 ERBINQ96RT1 1412 aa22.45■■□□□ 1.18
SEC13-212ENST00000432213 SYNMO15061 1565 aa22.42■■□□□ 1.18
SEC13-212ENST00000432213 ARHGAP23Q9P227 1491 aa22.42■■□□□ 1.18
SEC13-212ENST00000432213 LRRC7Q96NW7 1537 aa22.41■■□□□ 1.18
SEC13-212ENST00000432213 HSPA1LP34931 641 aa22.41■■□□□ 1.18
SEC13-212ENST00000432213 PIP4K2BP78356 416 aa22.41■■□□□ 1.18
SEC13-212ENST00000432213 MED1Q15648 1581 aaPredicted RBP22.41■■□□□ 1.18
SEC13-212ENST00000432213 SLIT1O75093 1534 aa22.41■■□□□ 1.18
SEC13-212ENST00000432213 ARHGAP31Q2M1Z3 1444 aa22.4■■□□□ 1.18
SEC13-212ENST00000432213 SCAF11Q99590 1463 aaKnown RBP22.39■■□□□ 1.17
SEC13-212ENST00000432213 SCAF1Q9H7N4 1312 aaKnown RBP22.38■■□□□ 1.17
SEC13-212ENST00000432213 LTKP29376 864 aa22.38■■□□□ 1.17
SEC13-212ENST00000432213 CHIC2Q9UKJ5 165 aa22.38■■□□□ 1.17
SEC13-212ENST00000432213 MYO5BQ9ULV0 1848 aa22.37■■□□□ 1.17
SEC13-212ENST00000432213 SOCS7O14512 581 aa22.37■■□□□ 1.17
SEC13-212ENST00000432213 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.37■■□□□ 1.17
SEC13-212ENST00000432213 LMTK2Q8IWU2 1503 aa22.36■■□□□ 1.17
SEC13-212ENST00000432213 EFCAB6Q5THR3 1501 aa22.35■■□□□ 1.17
SEC13-212ENST00000432213 KDM5AP29375 1690 aaKnown RBP22.33■■□□□ 1.17
SEC13-212ENST00000432213 ADGRL2O95490 1459 aa22.33■■□□□ 1.16
SEC13-212ENST00000432213 TOM1O60784 492 aa22.29■■□□□ 1.16
SEC13-212ENST00000432213 ANKRD30AQ9BXX3 1397 aa22.28■■□□□ 1.16
SEC13-212ENST00000432213 APLP2Q06481 763 aa22.28■■□□□ 1.16
SEC13-212ENST00000432213 SENP3Q9H4L4 574 aaPredicted RBP22.28■■□□□ 1.16
SEC13-212ENST00000432213 TMEM2Q9UHN6 1383 aa22.27■■□□□ 1.16
SEC13-212ENST00000432213 ADGRB3O60242 1522 aa22.27■■□□□ 1.16
SEC13-212ENST00000432213 GCC2Q8IWJ2 1684 aa22.27■■□□□ 1.16
SEC13-212ENST00000432213 NOS1P29475 1434 aa22.27■■□□□ 1.16
SEC13-212ENST00000432213 TXNDC2Q86VQ3 553 aa22.27■■□□□ 1.16
SEC13-212ENST00000432213 TET3O43151 1660 aa22.26■■□□□ 1.15
SEC13-212ENST00000432213 IDI1Q13907 227 aa22.24■■□□□ 1.15
SEC13-212ENST00000432213 KANK1Q14678 1352 aa22.24■■□□□ 1.15
SEC13-212ENST00000432213 UNC13BO14795 1591 aa22.23■■□□□ 1.15
SEC13-212ENST00000432213 E9PCH4 1651 aa22.21■■□□□ 1.15
SEC13-212ENST00000432213 FAM50AQ14320 339 aaKnown RBP22.2■■□□□ 1.14
SEC13-212ENST00000432213 ANKRD50Q9ULJ7 1429 aa22.19■■□□□ 1.14
SEC13-212ENST00000432213 NWD1Q149M9 1564 aa22.19■■□□□ 1.14
SEC13-212ENST00000432213 TMEM131LA2VDJ0 1609 aa22.18■■□□□ 1.14
SEC13-212ENST00000432213 RBM33Q96EV2 1170 aaKnown RBP22.16■■□□□ 1.14
SEC13-212ENST00000432213 SLC26A8Q96RN1 970 aa22.15■■□□□ 1.14
SEC13-212ENST00000432213 ZFYVE9O95405 1425 aa22.14■■□□□ 1.14
SEC13-212ENST00000432213 EID1Q9Y6B2 187 aa22.14■■□□□ 1.13
SEC13-212ENST00000432213 CHD2O14647 1828 aaKnown RBP22.14■■□□□ 1.13
SEC13-212ENST00000432213 ROBO1Q9Y6N7 1651 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 138.3 ms