RNA–Protein interactions for RNA: ENST00000431505.6

RHBDL3-202, Transcript of rhomboid like 3, humanhuman

TSL 1 (best)

Gene RHBDL3, Length 1,262 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3-202ENST00000431505 MYO3AQ8NEV4 1616 aa29.5■■■□□ 2.31
RHBDL3-202ENST00000431505 PTPRTO14522 1441 aa29.5■■■□□ 2.31
RHBDL3-202ENST00000431505 CAMSAP1Q5T5Y3 1602 aa29.49■■■□□ 2.31
RHBDL3-202ENST00000431505 NCOA1Q15788 1441 aa29.48■■■□□ 2.31
RHBDL3-202ENST00000431505 ZNF142P52746 1687 aaPredicted RBP29.48■■■□□ 2.31
RHBDL3-202ENST00000431505 FGD6Q6ZV73 1430 aa29.47■■■□□ 2.31
RHBDL3-202ENST00000431505 CEP170BQ9Y4F5 1589 aaPredicted RBP29.45■■■□□ 2.31
RHBDL3-202ENST00000431505 EIF2AK4Q9P2K8 1649 aaKnown RBP29.44■■■□□ 2.3
RHBDL3-202ENST00000431505 PZPP20742 1482 aa29.43■■■□□ 2.3
RHBDL3-202ENST00000431505 DUOX2Q9NRD8 1548 aa29.43■■■□□ 2.3
RHBDL3-202ENST00000431505 ABCC5O15440 1437 aa29.43■■■□□ 2.3
RHBDL3-202ENST00000431505 TCOF1Q13428 1488 aaKnown RBP29.42■■■□□ 2.3
RHBDL3-202ENST00000431505 RNF17Q9BXT8 1623 aaKnown RBP29.42■■■□□ 2.3
RHBDL3-202ENST00000431505 CROCC2H7BZ55 1655 aa29.42■■■□□ 2.3
RHBDL3-202ENST00000431505 FBXO31Q5XUX0 539 aaPredicted RBP29.42■■■□□ 2.3
RHBDL3-202ENST00000431505 SHANK2Q9UPX8 1470 aa29.42■■■□□ 2.3
RHBDL3-202ENST00000431505 TNRQ92752 1358 aa29.41■■■□□ 2.3
RHBDL3-202ENST00000431505 PKD2Q13563 968 aa29.4■■■□□ 2.3
RHBDL3-202ENST00000431505 A2ML1A8K2U0 1454 aa29.4■■■□□ 2.3
RHBDL3-202ENST00000431505 RRP7BPQ9NSQ0 103 aa29.39■■■□□ 2.3
RHBDL3-202ENST00000431505 NCKAP5LQ9HCH0 1330 aa29.39■■■□□ 2.3
RHBDL3-202ENST00000431505 KIF15Q9NS87 1388 aa29.39■■■□□ 2.29
RHBDL3-202ENST00000431505 DAPK1P53355 1430 aa29.38■■■□□ 2.29
RHBDL3-202ENST00000431505 PLA2R1Q13018 1463 aa29.38■■■□□ 2.29
RHBDL3-202ENST00000431505 DNMT1P26358 1616 aaKnown RBP29.38■■■□□ 2.29
RHBDL3-202ENST00000431505 ZC3H13Q5T200 1668 aaKnown RBP29.37■■■□□ 2.29
RHBDL3-202ENST00000431505 ABCC3O15438 1527 aa29.33■■■□□ 2.29
RHBDL3-202ENST00000431505 ERBINQ96RT1 1412 aa29.32■■■□□ 2.28
RHBDL3-202ENST00000431505 ANKRD30AQ9BXX3 1397 aa29.32■■■□□ 2.28
RHBDL3-202ENST00000431505 CHIC2Q9UKJ5 165 aa29.32■■■□□ 2.28
RHBDL3-202ENST00000431505 FAM50AQ14320 339 aaKnown RBP29.31■■■□□ 2.28
RHBDL3-202ENST00000431505 NLRP1Q9C000 1473 aa29.29■■■□□ 2.28
RHBDL3-202ENST00000431505 THEMISQ8N1K5 641 aaPredicted RBP29.28■■■□□ 2.28
RHBDL3-202ENST00000431505 CEP152O94986 1710 aa29.28■■■□□ 2.28
RHBDL3-202ENST00000431505 CFAP65Q6ZU64 1925 aaKnown RBP29.28■■■□□ 2.28
RHBDL3-202ENST00000431505 MROH1Q8NDA8 1641 aa29.27■■■□□ 2.28
RHBDL3-202ENST00000431505 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.25■■■□□ 2.27
RHBDL3-202ENST00000431505 KANK1Q14678 1352 aa29.25■■■□□ 2.27
RHBDL3-202ENST00000431505 UGGT1Q9NYU2 1555 aa29.22■■■□□ 2.27
RHBDL3-202ENST00000431505 PRDM15P57071 1507 aaPredicted RBP29.22■■■□□ 2.27
RHBDL3-202ENST00000431505 LTBP4Q8N2S1 1624 aa29.21■■■□□ 2.27
RHBDL3-202ENST00000431505 ANKLE2Q86XL3 938 aa29.21■■■□□ 2.27
RHBDL3-202ENST00000431505 SPATA31D1Q6ZQQ2 1576 aa29.21■■■□□ 2.27
RHBDL3-202ENST00000431505 POLR1AO95602 1720 aaPredicted RBP29.2■■■□□ 2.27
RHBDL3-202ENST00000431505 ERVK-7P63135 1459 aa29.2■■■□□ 2.26
RHBDL3-202ENST00000431505 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.19■■■□□ 2.26
RHBDL3-202ENST00000431505 ZNF335Q9H4Z2 1342 aaPredicted RBP29.18■■■□□ 2.26
RHBDL3-202ENST00000431505 ADGRL2O95490 1459 aa29.17■■■□□ 2.26
RHBDL3-202ENST00000431505 DEPDC5O75140 1603 aa29.16■■■□□ 2.26
RHBDL3-202ENST00000431505 ARHGAP31Q2M1Z3 1444 aa29.15■■■□□ 2.26
RHBDL3-202ENST00000431505 IQSEC2Q5JU85 1478 aa29.15■■■□□ 2.26
RHBDL3-202ENST00000431505 NEURL4Q96JN8 1562 aa29.09■■■□□ 2.25
RHBDL3-202ENST00000431505 ANKRD50Q9ULJ7 1429 aa29.06■■■□□ 2.24
RHBDL3-202ENST00000431505 PPARGC1BQ86YN6 1023 aaKnown RBP29.06■■■□□ 2.24
RHBDL3-202ENST00000431505 LMTK2Q8IWU2 1503 aa29.05■■■□□ 2.24
RHBDL3-202ENST00000431505 NPHP4O75161 1426 aaPredicted RBP29.04■■■□□ 2.24
RHBDL3-202ENST00000431505 VWDEQ8N2E2 1590 aa29.04■■■□□ 2.24
RHBDL3-202ENST00000431505 MED14O60244 1454 aa29.04■■■□□ 2.24
RHBDL3-202ENST00000431505 UBR1Q8IWV7 1749 aa29.03■■■□□ 2.24
RHBDL3-202ENST00000431505 STAG3Q9UJ98 1225 aa29.03■■■□□ 2.24
RHBDL3-202ENST00000431505 IQGAP1P46940 1657 aa29■■■□□ 2.23
RHBDL3-202ENST00000431505 ROCK1Q13464 1354 aa29■■■□□ 2.23
RHBDL3-202ENST00000431505 UBAP1LF5GYI3 381 aa28.97■■■□□ 2.23
RHBDL3-202ENST00000431505 EID1Q9Y6B2 187 aa28.97■■■□□ 2.23
RHBDL3-202ENST00000431505 CPS1P31327 1500 aa28.97■■■□□ 2.23
RHBDL3-202ENST00000431505 EFCAB6Q5THR3 1501 aa28.96■■■□□ 2.23
RHBDL3-202ENST00000431505 ITGAEP38570 1179 aa28.96■■■□□ 2.23
RHBDL3-202ENST00000431505 PIK3C2BO00750 1634 aa28.94■■■□□ 2.22
RHBDL3-202ENST00000431505 TXNDC2Q86VQ3 553 aa28.94■■■□□ 2.22
RHBDL3-202ENST00000431505 SCAF11Q99590 1463 aaKnown RBP28.93■■■□□ 2.22
RHBDL3-202ENST00000431505 IDI1Q13907 227 aa28.92■■■□□ 2.22
RHBDL3-202ENST00000431505 SLIT1O75093 1534 aa28.92■■■□□ 2.22
RHBDL3-202ENST00000431505 SLC52A1Q9NWF4 448 aa28.9■■■□□ 2.22
RHBDL3-202ENST00000431505 RPRD2Q5VT52 1461 aaKnown RBP28.9■■■□□ 2.22
RHBDL3-202ENST00000431505 ARHGAP23Q9P227 1491 aa28.9■■■□□ 2.22
RHBDL3-202ENST00000431505 KDM5AP29375 1690 aaKnown RBP28.89■■■□□ 2.22
RHBDL3-202ENST00000431505 NOS1P29475 1434 aa28.89■■■□□ 2.22
RHBDL3-202ENST00000431505 LTKP29376 864 aa28.89■■■□□ 2.22
RHBDL3-202ENST00000431505 TET3O43151 1660 aa28.89■■■□□ 2.21
RHBDL3-202ENST00000431505 SYNMO15061 1565 aa28.88■■■□□ 2.21
RHBDL3-202ENST00000431505 TMEM2Q9UHN6 1383 aa28.87■■■□□ 2.21
RHBDL3-202ENST00000431505 RRBP1Q9P2E9 1410 aaKnown RBP28.86■■■□□ 2.21
RHBDL3-202ENST00000431505 UNC13BO14795 1591 aa28.86■■■□□ 2.21
RHBDL3-202ENST00000431505 GCC2Q8IWJ2 1684 aa28.86■■■□□ 2.21
RHBDL3-202ENST00000431505 TOM1O60784 492 aa28.85■■■□□ 2.21
RHBDL3-202ENST00000431505 SCAF1Q9H7N4 1312 aaKnown RBP28.8■■■□□ 2.2
RHBDL3-202ENST00000431505 ADGRB3O60242 1522 aa28.79■■■□□ 2.2
RHBDL3-202ENST00000431505 NUP155O75694 1391 aa28.78■■■□□ 2.2
RHBDL3-202ENST00000431505 IQGAP3Q86VI3 1631 aa28.77■■■□□ 2.2
RHBDL3-202ENST00000431505 STRCP1A6NGW2 1772 aa28.76■■■□□ 2.19
RHBDL3-202ENST00000431505 PIP4K2BP78356 416 aa28.76■■■□□ 2.19
RHBDL3-202ENST00000431505 HDGFP51858 240 aaKnown RBP28.75■■■□□ 2.19
RHBDL3-202ENST00000431505 E9PCH4 1651 aa28.74■■■□□ 2.19
RHBDL3-202ENST00000431505 BCANQ96GW7 911 aa28.73■■■□□ 2.19
RHBDL3-202ENST00000431505 LRRC7Q96NW7 1537 aa28.72■■■□□ 2.19
RHBDL3-202ENST00000431505 CHGAP10645 457 aaKnown RBP28.71■■■□□ 2.19
RHBDL3-202ENST00000431505 MYO5BQ9ULV0 1848 aa28.71■■■□□ 2.19
RHBDL3-202ENST00000431505 DISP3Q9P2K9 1392 aa28.69■■■□□ 2.18
RHBDL3-202ENST00000431505 PPP1R15AO75807 674 aaPredicted RBP28.68■■■□□ 2.18
RHBDL3-202ENST00000431505 SLC26A8Q96RN1 970 aa28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms