RNA–Protein interactions for RNA: ENST00000431116.2

HMGN1P38-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 38, humanhuman

BASIC

Gene HMGN1P38, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P38-201ENST00000431116 CEP170BQ9Y4F5 1589 aaPredicted RBP16■□□□□ 0.15
HMGN1P38-201ENST00000431116 FAM135AQ9P2D6 1515 aa15.99■□□□□ 0.15
HMGN1P38-201ENST00000431116 DMRT2Q9Y5R5 561 aa15.99■□□□□ 0.15
HMGN1P38-201ENST00000431116 NCOA1Q15788 1441 aa15.99■□□□□ 0.15
HMGN1P38-201ENST00000431116 KIF3BO15066 747 aa15.98■□□□□ 0.15
HMGN1P38-201ENST00000431116 TSPY4P0CV99 314 aa15.98■□□□□ 0.15
HMGN1P38-201ENST00000431116 TSPY10P0CW01 314 aa15.98■□□□□ 0.15
HMGN1P38-201ENST00000431116 CROCC2H7BZ55 1655 aa15.98■□□□□ 0.15
HMGN1P38-201ENST00000431116 APLP2Q06481 763 aa15.97■□□□□ 0.15
HMGN1P38-201ENST00000431116 RNF17Q9BXT8 1623 aaKnown RBP15.97■□□□□ 0.15
HMGN1P38-201ENST00000431116 PTPRTO14522 1441 aa15.96■□□□□ 0.15
HMGN1P38-201ENST00000431116 PTPN23Q9H3S7 1636 aa15.96■□□□□ 0.15
HMGN1P38-201ENST00000431116 EIF2AK4Q9P2K8 1649 aaKnown RBP15.96■□□□□ 0.15
HMGN1P38-201ENST00000431116 CERKQ8TCT0 537 aa15.95■□□□□ 0.14
HMGN1P38-201ENST00000431116 PZPP20742 1482 aa15.94■□□□□ 0.14
HMGN1P38-201ENST00000431116 ZC3H13Q5T200 1668 aaKnown RBP15.94■□□□□ 0.14
HMGN1P38-201ENST00000431116 PLA2R1Q13018 1463 aa15.92■□□□□ 0.14
HMGN1P38-201ENST00000431116 SHANK2Q9UPX8 1470 aa15.92■□□□□ 0.14
HMGN1P38-201ENST00000431116 WASHC2CQ9Y4E1 1318 aa15.92■□□□□ 0.14
HMGN1P38-201ENST00000431116 A2ML1A8K2U0 1454 aa15.91■□□□□ 0.14
HMGN1P38-201ENST00000431116 DNMT1P26358 1616 aaKnown RBP15.91■□□□□ 0.14
HMGN1P38-201ENST00000431116 MROH1Q8NDA8 1641 aa15.9■□□□□ 0.14
HMGN1P38-201ENST00000431116 TNRQ92752 1358 aa15.9■□□□□ 0.14
HMGN1P38-201ENST00000431116 ABCC3O15438 1527 aa15.9■□□□□ 0.14
HMGN1P38-201ENST00000431116 DUOX2Q9NRD8 1548 aa15.9■□□□□ 0.14
HMGN1P38-201ENST00000431116 FGD6Q6ZV73 1430 aa15.9■□□□□ 0.14
HMGN1P38-201ENST00000431116 CEP152O94986 1710 aa15.9■□□□□ 0.14
HMGN1P38-201ENST00000431116 POLR1AO95602 1720 aaPredicted RBP15.89■□□□□ 0.13
HMGN1P38-201ENST00000431116 TCOF1Q13428 1488 aaKnown RBP15.89■□□□□ 0.13
HMGN1P38-201ENST00000431116 ABCC5O15440 1437 aa15.88■□□□□ 0.13
HMGN1P38-201ENST00000431116 LTBP4Q8N2S1 1624 aa15.88■□□□□ 0.13
HMGN1P38-201ENST00000431116 FBXO31Q5XUX0 539 aaPredicted RBP15.88■□□□□ 0.13
HMGN1P38-201ENST00000431116 NCKAP5LQ9HCH0 1330 aa15.88■□□□□ 0.13
HMGN1P38-201ENST00000431116 DAPK1P53355 1430 aa15.87■□□□□ 0.13
HMGN1P38-201ENST00000431116 KIF15Q9NS87 1388 aa15.87■□□□□ 0.13
HMGN1P38-201ENST00000431116 PRDM15P57071 1507 aaPredicted RBP15.85■□□□□ 0.13
HMGN1P38-201ENST00000431116 PKD2Q13563 968 aa15.85■□□□□ 0.13
HMGN1P38-201ENST00000431116 ERBINQ96RT1 1412 aa15.85■□□□□ 0.13
HMGN1P38-201ENST00000431116 CFAP65Q6ZU64 1925 aaKnown RBP15.84■□□□□ 0.13
HMGN1P38-201ENST00000431116 NLRP1Q9C000 1473 aa15.84■□□□□ 0.13
HMGN1P38-201ENST00000431116 SPATA31D1Q6ZQQ2 1576 aa15.83■□□□□ 0.13
HMGN1P38-201ENST00000431116 NEURL4Q96JN8 1562 aa15.83■□□□□ 0.12
HMGN1P38-201ENST00000431116 DEPDC5O75140 1603 aa15.83■□□□□ 0.12
HMGN1P38-201ENST00000431116 UGGT1Q9NYU2 1555 aa15.82■□□□□ 0.12
HMGN1P38-201ENST00000431116 ERVK-7P63135 1459 aa15.81■□□□□ 0.12
HMGN1P38-201ENST00000431116 IQSEC2Q5JU85 1478 aa15.81■□□□□ 0.12
HMGN1P38-201ENST00000431116 ZNF335Q9H4Z2 1342 aaPredicted RBP15.8■□□□□ 0.12
HMGN1P38-201ENST00000431116 RRP7BPQ9NSQ0 103 aa15.8■□□□□ 0.12
HMGN1P38-201ENST00000431116 ANKRD30AQ9BXX3 1397 aa15.78■□□□□ 0.12
HMGN1P38-201ENST00000431116 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.77■□□□□ 0.12
HMGN1P38-201ENST00000431116 CHIC2Q9UKJ5 165 aa15.77■□□□□ 0.12
HMGN1P38-201ENST00000431116 UBR1Q8IWV7 1749 aa15.77■□□□□ 0.11
HMGN1P38-201ENST00000431116 FAM50AQ14320 339 aaKnown RBP15.75■□□□□ 0.11
HMGN1P38-201ENST00000431116 THEMISQ8N1K5 641 aaPredicted RBP15.75■□□□□ 0.11
HMGN1P38-201ENST00000431116 ADGRL2O95490 1459 aa15.75■□□□□ 0.11
HMGN1P38-201ENST00000431116 IQGAP1P46940 1657 aa15.75■□□□□ 0.11
HMGN1P38-201ENST00000431116 KANK1Q14678 1352 aa15.75■□□□□ 0.11
HMGN1P38-201ENST00000431116 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.74■□□□□ 0.11
HMGN1P38-201ENST00000431116 ARHGAP31Q2M1Z3 1444 aa15.74■□□□□ 0.11
HMGN1P38-201ENST00000431116 VWDEQ8N2E2 1590 aa15.74■□□□□ 0.11
HMGN1P38-201ENST00000431116 NPHP4O75161 1426 aaPredicted RBP15.72■□□□□ 0.11
HMGN1P38-201ENST00000431116 ANKLE2Q86XL3 938 aa15.72■□□□□ 0.11
HMGN1P38-201ENST00000431116 LMTK2Q8IWU2 1503 aa15.72■□□□□ 0.11
HMGN1P38-201ENST00000431116 MED14O60244 1454 aa15.71■□□□□ 0.11
HMGN1P38-201ENST00000431116 PIK3C2BO00750 1634 aa15.71■□□□□ 0.11
HMGN1P38-201ENST00000431116 CPS1P31327 1500 aa15.7■□□□□ 0.1
HMGN1P38-201ENST00000431116 EFCAB6Q5THR3 1501 aa15.7■□□□□ 0.1
HMGN1P38-201ENST00000431116 ANKRD50Q9ULJ7 1429 aa15.68■□□□□ 0.1
HMGN1P38-201ENST00000431116 KDM5AP29375 1690 aaKnown RBP15.67■□□□□ 0.1
HMGN1P38-201ENST00000431116 SYNMO15061 1565 aa15.66■□□□□ 0.1
HMGN1P38-201ENST00000431116 SCAF11Q99590 1463 aaKnown RBP15.66■□□□□ 0.1
HMGN1P38-201ENST00000431116 SLIT1O75093 1534 aa15.66■□□□□ 0.1
HMGN1P38-201ENST00000431116 UNC13BO14795 1591 aa15.66■□□□□ 0.1
HMGN1P38-201ENST00000431116 ARHGAP23Q9P227 1491 aa15.65■□□□□ 0.1
HMGN1P38-201ENST00000431116 STRCP1A6NGW2 1772 aa15.65■□□□□ 0.1
HMGN1P38-201ENST00000431116 TET3O43151 1660 aa15.65■□□□□ 0.1
HMGN1P38-201ENST00000431116 UBAP1LF5GYI3 381 aa15.65■□□□□ 0.1
HMGN1P38-201ENST00000431116 GCC2Q8IWJ2 1684 aa15.64■□□□□ 0.09
HMGN1P38-201ENST00000431116 ADGRB3O60242 1522 aa15.62■□□□□ 0.09
HMGN1P38-201ENST00000431116 NOS1P29475 1434 aa15.61■□□□□ 0.09
HMGN1P38-201ENST00000431116 RPRD2Q5VT52 1461 aaKnown RBP15.61■□□□□ 0.09
HMGN1P38-201ENST00000431116 PPARGC1BQ86YN6 1023 aaKnown RBP15.61■□□□□ 0.09
HMGN1P38-201ENST00000431116 STAG3Q9UJ98 1225 aa15.6■□□□□ 0.09
HMGN1P38-201ENST00000431116 ROCK1Q13464 1354 aa15.6■□□□□ 0.09
HMGN1P38-201ENST00000431116 TMEM2Q9UHN6 1383 aa15.6■□□□□ 0.09
HMGN1P38-201ENST00000431116 MYO5BQ9ULV0 1848 aa15.59■□□□□ 0.09
HMGN1P38-201ENST00000431116 IQGAP3Q86VI3 1631 aa15.59■□□□□ 0.09
HMGN1P38-201ENST00000431116 LTKP29376 864 aa15.59■□□□□ 0.09
HMGN1P38-201ENST00000431116 TXNDC2Q86VQ3 553 aa15.59■□□□□ 0.09
HMGN1P38-201ENST00000431116 E9PCH4 1651 aa15.58■□□□□ 0.08
HMGN1P38-201ENST00000431116 EID1Q9Y6B2 187 aa15.58■□□□□ 0.08
HMGN1P38-201ENST00000431116 LRRC7Q96NW7 1537 aa15.58■□□□□ 0.08
HMGN1P38-201ENST00000431116 ITGAEP38570 1179 aa15.57■□□□□ 0.08
HMGN1P38-201ENST00000431116 IDI1Q13907 227 aa15.57■□□□□ 0.08
HMGN1P38-201ENST00000431116 DISP3Q9P2K9 1392 aa15.57■□□□□ 0.08
HMGN1P38-201ENST00000431116 SCAF1Q9H7N4 1312 aaKnown RBP15.56■□□□□ 0.08
HMGN1P38-201ENST00000431116 ALKQ9UM73 1620 aa15.55■□□□□ 0.08
HMGN1P38-201ENST00000431116 XIRP1Q702N8 1843 aaKnown RBP15.54■□□□□ 0.08
HMGN1P38-201ENST00000431116 TOM1O60784 492 aa15.54■□□□□ 0.08
HMGN1P38-201ENST00000431116 PIP4K2BP78356 416 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms