RNA–Protein interactions for RNA: ENST00000430982.1

PTCD1-204, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-204ENST00000430982 MAP3K1Q13233 1512 aa23.85■■□□□ 1.41
PTCD1-204ENST00000430982 KANK4Q5T7N3 995 aaPredicted RBP23.85■■□□□ 1.41
PTCD1-204ENST00000430982 CPS1P31327 1500 aa23.84■■□□□ 1.41
PTCD1-204ENST00000430982 POLR1AO95602 1720 aaPredicted RBP23.84■■□□□ 1.41
PTCD1-204ENST00000430982 NCOA2Q15596 1464 aa23.83■■□□□ 1.41
PTCD1-204ENST00000430982 GGT6Q6P531 493 aa23.79■■□□□ 1.4
PTCD1-204ENST00000430982 HSPA1LP34931 641 aa23.78■■□□□ 1.4
PTCD1-204ENST00000430982 MBD5Q9P267 1494 aa23.77■■□□□ 1.4
PTCD1-204ENST00000430982 SHANK2Q9UPX8 1470 aa23.77■■□□□ 1.4
PTCD1-204ENST00000430982 FAM135AQ9P2D6 1515 aa23.77■■□□□ 1.4
PTCD1-204ENST00000430982 ALKQ9UM73 1620 aa23.77■■□□□ 1.4
PTCD1-204ENST00000430982 RTEL1-TNFRSF6BF6WH68 1400 aa23.76■■□□□ 1.39
PTCD1-204ENST00000430982 VWDEQ8N2E2 1590 aa23.75■■□□□ 1.39
PTCD1-204ENST00000430982 PZPP20742 1482 aa23.74■■□□□ 1.39
PTCD1-204ENST00000430982 ZNF644Q9H582 1327 aaPredicted RBP23.73■■□□□ 1.39
PTCD1-204ENST00000430982 TOM1O60784 492 aa23.72■■□□□ 1.39
PTCD1-204ENST00000430982 DHX29Q7Z478 1369 aaKnown RBP23.71■■□□□ 1.39
PTCD1-204ENST00000430982 TNRQ92752 1358 aa23.71■■□□□ 1.39
PTCD1-204ENST00000430982 KDM5DQ9BY66 1539 aa23.7■■□□□ 1.38
PTCD1-204ENST00000430982 MED14O60244 1454 aa23.7■■□□□ 1.38
PTCD1-204ENST00000430982 DEPDC5O75140 1603 aa23.7■■□□□ 1.38
PTCD1-204ENST00000430982 PIP4K2BP78356 416 aa23.68■■□□□ 1.38
PTCD1-204ENST00000430982 NLRP1Q9C000 1473 aa23.66■■□□□ 1.38
PTCD1-204ENST00000430982 SCAF1Q9H7N4 1312 aaKnown RBP23.65■■□□□ 1.38
PTCD1-204ENST00000430982 FBXO31Q5XUX0 539 aaPredicted RBP23.65■■□□□ 1.38
PTCD1-204ENST00000430982 CAMSAP2Q08AD1 1489 aa23.64■■□□□ 1.38
PTCD1-204ENST00000430982 MYOM3Q5VTT5 1437 aa23.63■■□□□ 1.37
PTCD1-204ENST00000430982 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.63■■□□□ 1.37
PTCD1-204ENST00000430982 UGGT1Q9NYU2 1555 aa23.61■■□□□ 1.37
PTCD1-204ENST00000430982 NPHP4O75161 1426 aaPredicted RBP23.61■■□□□ 1.37
PTCD1-204ENST00000430982 MIA2Q96PC5 1412 aa23.61■■□□□ 1.37
PTCD1-204ENST00000430982 ANKLE2Q86XL3 938 aa23.6■■□□□ 1.37
PTCD1-204ENST00000430982 IQGAP1P46940 1657 aa23.6■■□□□ 1.37
PTCD1-204ENST00000430982 STRCP1A6NGW2 1772 aa23.59■■□□□ 1.37
PTCD1-204ENST00000430982 SYNMO15061 1565 aa23.58■■□□□ 1.37
PTCD1-204ENST00000430982 CCDC141Q6ZP82 1450 aa23.58■■□□□ 1.37
PTCD1-204ENST00000430982 RNF17Q9BXT8 1623 aaKnown RBP23.58■■□□□ 1.36
PTCD1-204ENST00000430982 KIF3BO15066 747 aa23.57■■□□□ 1.36
PTCD1-204ENST00000430982 THEMISQ8N1K5 641 aaPredicted RBP23.57■■□□□ 1.36
PTCD1-204ENST00000430982 LRRC7Q96NW7 1537 aa23.56■■□□□ 1.36
PTCD1-204ENST00000430982 RSPH4AQ5TD94 716 aa23.55■■□□□ 1.36
PTCD1-204ENST00000430982 WASHC2CQ9Y4E1 1318 aa23.53■■□□□ 1.36
PTCD1-204ENST00000430982 PHF23Q9BUL5 403 aaPredicted RBP23.52■■□□□ 1.36
PTCD1-204ENST00000430982 ZC3H13Q5T200 1668 aaKnown RBP23.51■■□□□ 1.35
PTCD1-204ENST00000430982 PPARGC1BQ86YN6 1023 aaKnown RBP23.51■■□□□ 1.35
PTCD1-204ENST00000430982 ARHGEF5Q12774 1597 aa23.5■■□□□ 1.35
PTCD1-204ENST00000430982 TSPY4P0CV99 314 aa23.5■■□□□ 1.35
PTCD1-204ENST00000430982 TSPY10P0CW01 314 aa23.5■■□□□ 1.35
PTCD1-204ENST00000430982 FGD6Q6ZV73 1430 aa23.5■■□□□ 1.35
PTCD1-204ENST00000430982 ABCC3O15438 1527 aa23.48■■□□□ 1.35
PTCD1-204ENST00000430982 PTPN23Q9H3S7 1636 aa23.47■■□□□ 1.35
PTCD1-204ENST00000430982 ERVK-7P63135 1459 aa23.45■■□□□ 1.34
PTCD1-204ENST00000430982 RGS17Q9UGC6 210 aaPredicted RBP23.43■■□□□ 1.34
PTCD1-204ENST00000430982 MROH1Q8NDA8 1641 aa23.43■■□□□ 1.34
PTCD1-204ENST00000430982 UBR1Q8IWV7 1749 aa23.42■■□□□ 1.34
PTCD1-204ENST00000430982 EIF2AK4Q9P2K8 1649 aaKnown RBP23.42■■□□□ 1.34
PTCD1-204ENST00000430982 MAST1Q9Y2H9 1570 aa23.41■■□□□ 1.34
PTCD1-204ENST00000430982 XIRP1Q702N8 1843 aaKnown RBP23.41■■□□□ 1.34
PTCD1-204ENST00000430982 FAM50AQ14320 339 aaKnown RBP23.41■■□□□ 1.34
PTCD1-204ENST00000430982 ARHGAP23Q9P227 1491 aa23.4■■□□□ 1.34
PTCD1-204ENST00000430982 SCAF11Q99590 1463 aaKnown RBP23.39■■□□□ 1.34
PTCD1-204ENST00000430982 SLIT1O75093 1534 aa23.38■■□□□ 1.33
PTCD1-204ENST00000430982 ABCC5O15440 1437 aa23.38■■□□□ 1.33
PTCD1-204ENST00000430982 DAPK1P53355 1430 aa23.36■■□□□ 1.33
PTCD1-204ENST00000430982 CEP152O94986 1710 aa23.33■■□□□ 1.32
PTCD1-204ENST00000430982 FAM135BQ49AJ0 1406 aa23.32■■□□□ 1.32
PTCD1-204ENST00000430982 CHIC2Q9UKJ5 165 aa23.31■■□□□ 1.32
PTCD1-204ENST00000430982 LTKP29376 864 aa23.3■■□□□ 1.32
PTCD1-204ENST00000430982 ARHGAP31Q2M1Z3 1444 aa23.3■■□□□ 1.32
PTCD1-204ENST00000430982 SENP3Q9H4L4 574 aaPredicted RBP23.29■■□□□ 1.32
PTCD1-204ENST00000430982 CROCC2H7BZ55 1655 aa23.28■■□□□ 1.32
PTCD1-204ENST00000430982 RRP7BPQ9NSQ0 103 aa23.28■■□□□ 1.32
PTCD1-204ENST00000430982 PRDM15P57071 1507 aaPredicted RBP23.28■■□□□ 1.32
PTCD1-204ENST00000430982 KIF15Q9NS87 1388 aa23.27■■□□□ 1.31
PTCD1-204ENST00000430982 ANKRD30AQ9BXX3 1397 aa23.25■■□□□ 1.31
PTCD1-204ENST00000430982 DUOX2Q9NRD8 1548 aa23.23■■□□□ 1.31
PTCD1-204ENST00000430982 KDM5AP29375 1690 aaKnown RBP23.23■■□□□ 1.31
PTCD1-204ENST00000430982 CFAP65Q6ZU64 1925 aaKnown RBP23.23■■□□□ 1.31
PTCD1-204ENST00000430982 POTEAQ6S8J7 498 aa23.22■■□□□ 1.31
PTCD1-204ENST00000430982 TXNDC2Q86VQ3 553 aa23.22■■□□□ 1.31
PTCD1-204ENST00000430982 PIK3C2BO00750 1634 aa23.22■■□□□ 1.31
PTCD1-204ENST00000430982 ITGAEP38570 1179 aa23.21■■□□□ 1.31
PTCD1-204ENST00000430982 ROBO1Q9Y6N7 1651 aa23.21■■□□□ 1.31
PTCD1-204ENST00000430982 TMEM2Q9UHN6 1383 aa23.2■■□□□ 1.3
PTCD1-204ENST00000430982 TMEM94Q12767 1356 aa23.18■■□□□ 1.3
PTCD1-204ENST00000430982 TET3O43151 1660 aa23.18■■□□□ 1.3
PTCD1-204ENST00000430982 ADGRL2O95490 1459 aa23.17■■□□□ 1.3
PTCD1-204ENST00000430982 ERBINQ96RT1 1412 aa23.16■■□□□ 1.3
PTCD1-204ENST00000430982 NWD1Q149M9 1564 aa23.16■■□□□ 1.3
PTCD1-204ENST00000430982 EID1Q9Y6B2 187 aa23.16■■□□□ 1.3
PTCD1-204ENST00000430982 RRBP1Q9P2E9 1410 aaKnown RBP23.15■■□□□ 1.3
PTCD1-204ENST00000430982 EFCAB6Q5THR3 1501 aa23.14■■□□□ 1.3
PTCD1-204ENST00000430982 NKTRP30414 1462 aaKnown RBP23.13■■□□□ 1.29
PTCD1-204ENST00000430982 KCNA6P17658 529 aa23.12■■□□□ 1.29
PTCD1-204ENST00000430982 LMTK2Q8IWU2 1503 aa23.12■■□□□ 1.29
PTCD1-204ENST00000430982 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.11■■□□□ 1.294e-9■■□□□ 12.1
PTCD1-204ENST00000430982 SETD1AO15047 1707 aaKnown RBP23.11■■□□□ 1.29
PTCD1-204ENST00000430982 ROCK1Q13464 1354 aa23.08■■□□□ 1.29
PTCD1-204ENST00000430982 ANKRD50Q9ULJ7 1429 aa23.08■■□□□ 1.28
PTCD1-204ENST00000430982 ADGRB3O60242 1522 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms