RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 SETD1BQ9UPS6 1966 aaKnown RBP15.13■□□□□ 0.01
HDAC6-207ENST00000430858 CLTCQ00610 1675 aaKnown RBP15.12■□□□□ 0.01
HDAC6-207ENST00000430858 RRP7BPQ9NSQ0 103 aa15.12■□□□□ 0.01
HDAC6-207ENST00000430858 CROCC2H7BZ55 1655 aa15.12■□□□□ 0.01
HDAC6-207ENST00000430858 KDM5DQ9BY66 1539 aa15.12■□□□□ 0.01
HDAC6-207ENST00000430858 ANKRD30AQ9BXX3 1397 aa15.11■□□□□ 0.01
HDAC6-207ENST00000430858 EIF2AK4Q9P2K8 1649 aaKnown RBP15.1■□□□□ 0.01
HDAC6-207ENST00000430858 PTPRKQ15262 1439 aa15.1■□□□□ 0.01
HDAC6-207ENST00000430858 ERBINQ96RT1 1412 aa15.1■□□□□ 0.01
HDAC6-207ENST00000430858 CHIC2Q9UKJ5 165 aa15.1■□□□□ 0.01
HDAC6-207ENST00000430858 PPARGC1BQ86YN6 1023 aaKnown RBP15.09■□□□□ 0.01
HDAC6-207ENST00000430858 NCOA1Q15788 1441 aa15.09■□□□□ 0.01
HDAC6-207ENST00000430858 RNF17Q9BXT8 1623 aaKnown RBP15.08■□□□□ 0
HDAC6-207ENST00000430858 ADGRL2O95490 1459 aa15.08■□□□□ 0
HDAC6-207ENST00000430858 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.06■□□□□ 0
HDAC6-207ENST00000430858 PZPP20742 1482 aa15.06■□□□□ 0
HDAC6-207ENST00000430858 ABCC3O15438 1527 aa15.04■□□□□ -0
HDAC6-207ENST00000430858 MROH1Q8NDA8 1641 aa15.03■□□□□ -0
HDAC6-207ENST00000430858 FBXO31Q5XUX0 539 aaPredicted RBP15.03■□□□□ -0
HDAC6-207ENST00000430858 DMRT2Q9Y5R5 561 aa15.03■□□□□ -0
HDAC6-207ENST00000430858 ZC3H13Q5T200 1668 aaKnown RBP15.03■□□□□ -0
HDAC6-207ENST00000430858 TNRQ92752 1358 aa15.02■□□□□ -0
HDAC6-207ENST00000430858 PRDM15P57071 1507 aaPredicted RBP15.02□□□□□ -0.01
HDAC6-207ENST00000430858 KANK1Q14678 1352 aa15.01□□□□□ -0.01
HDAC6-207ENST00000430858 ROCK1Q13464 1354 aa15□□□□□ -0.01
HDAC6-207ENST00000430858 MYO3AQ8NEV4 1616 aa15□□□□□ -0.01
HDAC6-207ENST00000430858 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15□□□□□ -0.01
HDAC6-207ENST00000430858 ANKRD50Q9ULJ7 1429 aa15□□□□□ -0.01
HDAC6-207ENST00000430858 CEP170BQ9Y4F5 1589 aaPredicted RBP14.99□□□□□ -0.01
HDAC6-207ENST00000430858 ZNF142P52746 1687 aaPredicted RBP14.98□□□□□ -0.01
HDAC6-207ENST00000430858 A2ML1A8K2U0 1454 aa14.98□□□□□ -0.01
HDAC6-207ENST00000430858 DEPDC5O75140 1603 aa14.98□□□□□ -0.01
HDAC6-207ENST00000430858 ARHGAP31Q2M1Z3 1444 aa14.98□□□□□ -0.01
HDAC6-207ENST00000430858 RRBP1Q9P2E9 1410 aaKnown RBP14.98□□□□□ -0.01
HDAC6-207ENST00000430858 NLRP1Q9C000 1473 aa14.97□□□□□ -0.01
HDAC6-207ENST00000430858 CAMSAP1Q5T5Y3 1602 aa14.97□□□□□ -0.01
HDAC6-207ENST00000430858 ITGAEP38570 1179 aa14.97□□□□□ -0.01
HDAC6-207ENST00000430858 ERVK-7P63135 1459 aa14.96□□□□□ -0.01
HDAC6-207ENST00000430858 PLA2R1Q13018 1463 aa14.96□□□□□ -0.01
HDAC6-207ENST00000430858 STRCQ7RTU9 1775 aa14.96□□□□□ -0.01
HDAC6-207ENST00000430858 PTPRTO14522 1441 aa14.96□□□□□ -0.01
HDAC6-207ENST00000430858 SPATA31D1Q6ZQQ2 1576 aa14.96□□□□□ -0.01
HDAC6-207ENST00000430858 PKD2Q13563 968 aa14.95□□□□□ -0.02
HDAC6-207ENST00000430858 LMTK2Q8IWU2 1503 aa14.95□□□□□ -0.02
HDAC6-207ENST00000430858 CEP152O94986 1710 aa14.95□□□□□ -0.02
HDAC6-207ENST00000430858 VWDEQ8N2E2 1590 aa14.94□□□□□ -0.02
HDAC6-207ENST00000430858 THEMISQ8N1K5 641 aaPredicted RBP14.93□□□□□ -0.02
HDAC6-207ENST00000430858 NCKAP5LQ9HCH0 1330 aa14.92□□□□□ -0.02
HDAC6-207ENST00000430858 UGGT1Q9NYU2 1555 aa14.9□□□□□ -0.02
HDAC6-207ENST00000430858 EFCAB6Q5THR3 1501 aa14.88□□□□□ -0.03
HDAC6-207ENST00000430858 ILDR1Q86SU0 546 aaPredicted RBP14.88□□□□□ -0.03
HDAC6-207ENST00000430858 ANKLE2Q86XL3 938 aa14.88□□□□□ -0.03
HDAC6-207ENST00000430858 UNC13BO14795 1591 aa14.87□□□□□ -0.03
HDAC6-207ENST00000430858 RPRD2Q5VT52 1461 aaKnown RBP14.87□□□□□ -0.03
HDAC6-207ENST00000430858 CERKQ8TCT0 537 aa14.86□□□□□ -0.03
HDAC6-207ENST00000430858 NOS1P29475 1434 aa14.85□□□□□ -0.03
HDAC6-207ENST00000430858 FBXO41Q8TF61 875 aa14.85□□□□□ -0.03
HDAC6-207ENST00000430858 NUP155O75694 1391 aa14.85□□□□□ -0.03
HDAC6-207ENST00000430858 IDI1Q13907 227 aa14.83□□□□□ -0.04
HDAC6-207ENST00000430858 SLC52A1Q9NWF4 448 aa14.83□□□□□ -0.04
HDAC6-207ENST00000430858 STAG3Q9UJ98 1225 aa14.83□□□□□ -0.04
HDAC6-207ENST00000430858 CFAP65Q6ZU64 1925 aaKnown RBP14.83□□□□□ -0.04
HDAC6-207ENST00000430858 TET3O43151 1660 aa14.83□□□□□ -0.04
HDAC6-207ENST00000430858 NAIPQ13075 1403 aa14.83□□□□□ -0.04
HDAC6-207ENST00000430858 MED14O60244 1454 aa14.82□□□□□ -0.04
HDAC6-207ENST00000430858 HFM1A2PYH4 1435 aa14.81□□□□□ -0.04
HDAC6-207ENST00000430858 NEURL4Q96JN8 1562 aa14.81□□□□□ -0.04
HDAC6-207ENST00000430858 IQGAP3Q86VI3 1631 aa14.81□□□□□ -0.04
HDAC6-207ENST00000430858 ZNF335Q9H4Z2 1342 aaPredicted RBP14.8□□□□□ -0.04
HDAC6-207ENST00000430858 NPHP4O75161 1426 aaPredicted RBP14.8□□□□□ -0.04
HDAC6-207ENST00000430858 SYNMO15061 1565 aa14.8□□□□□ -0.04
HDAC6-207ENST00000430858 UBR1Q8IWV7 1749 aa14.8□□□□□ -0.04
HDAC6-207ENST00000430858 SLIT1O75093 1534 aa14.79□□□□□ -0.04
HDAC6-207ENST00000430858 POLR1AO95602 1720 aaPredicted RBP14.79□□□□□ -0.04
HDAC6-207ENST00000430858 GCC2Q8IWJ2 1684 aa14.79□□□□□ -0.04
HDAC6-207ENST00000430858 LTBP4Q8N2S1 1624 aa14.79□□□□□ -0.04
HDAC6-207ENST00000430858 ARHGAP23Q9P227 1491 aa14.79□□□□□ -0.04
HDAC6-207ENST00000430858 EID1Q9Y6B2 187 aa14.79□□□□□ -0.04
HDAC6-207ENST00000430858 PIK3C2BO00750 1634 aa14.78□□□□□ -0.04
HDAC6-207ENST00000430858 TMEM2Q9UHN6 1383 aa14.78□□□□□ -0.04
HDAC6-207ENST00000430858 TXNDC2Q86VQ3 553 aa14.78□□□□□ -0.04
HDAC6-207ENST00000430858 SCAF11Q99590 1463 aaKnown RBP14.77□□□□□ -0.04
HDAC6-207ENST00000430858 KDM5AP29375 1690 aaKnown RBP14.77□□□□□ -0.05
HDAC6-207ENST00000430858 LTKP29376 864 aa14.76□□□□□ -0.05
HDAC6-207ENST00000430858 E9PCH4 1651 aa14.75□□□□□ -0.05
HDAC6-207ENST00000430858 ADGRB3O60242 1522 aa14.75□□□□□ -0.05
HDAC6-207ENST00000430858 IQSEC2Q5JU85 1478 aa14.75□□□□□ -0.05
HDAC6-207ENST00000430858 TRIM52Q96A61 297 aa14.73□□□□□ -0.05
HDAC6-207ENST00000430858 IQGAP1P46940 1657 aa14.73□□□□□ -0.05
HDAC6-207ENST00000430858 HDGFP51858 240 aaKnown RBP14.72□□□□□ -0.05
HDAC6-207ENST00000430858 CPS1P31327 1500 aa14.71□□□□□ -0.06
HDAC6-207ENST00000430858 CHGAP10645 457 aaKnown RBP14.7□□□□□ -0.06
HDAC6-207ENST00000430858 SLC4A1APQ9BWU0 796 aaKnown RBP14.69□□□□□ -0.06
HDAC6-207ENST00000430858 ACIN1Q9UKV3 1341 aaKnown RBP14.68□□□□□ -0.06
HDAC6-207ENST00000430858 TMEM131LA2VDJ0 1609 aa14.68□□□□□ -0.06
HDAC6-207ENST00000430858 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.68□□□□□ -0.06
HDAC6-207ENST00000430858 ZFYVE9O95405 1425 aa14.67□□□□□ -0.06
HDAC6-207ENST00000430858 RIMS2Q9UQ26 1411 aa14.67□□□□□ -0.06
HDAC6-207ENST00000430858 PPP1R15AO75807 674 aaPredicted RBP14.66□□□□□ -0.06
HDAC6-207ENST00000430858 PLEKHG1Q9ULL1 1385 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms