RNA–Protein interactions for RNA: ENST00000430799.7

ARID1A-204, Transcript of AT-rich interaction domain 1A, human

APPRIS ALT2 TSL 5 BASIC

Gene ARID1A, Length 6,521 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARID1A-204	ENST00000430799	IPO9	Q96P70	1041 aa	Known RBP	13.65	□□□□□ -0.22
ARID1A-204	ENST00000430799	SLK	Q9H2G2	1235 aa	Predicted RBP	13.65	□□□□□ -0.22
ARID1A-204	ENST00000430799	TAF7L	Q5H9L4	462 aa		13.65	□□□□□ -0.22
ARID1A-204	ENST00000430799	ZNF330	Q9Y3S2	320 aa	Predicted RBP	13.65	□□□□□ -0.22
ARID1A-204	ENST00000430799	MFAP1	P55081	439 aa	Known RBP	13.64	□□□□□ -0.23
ARID1A-204	ENST00000430799	RTN4	Q9NQC3	1192 aa	Known RBP	13.64	□□□□□ -0.23
ARID1A-204	ENST00000430799	ST20-MTHFS	A0A0A6YYL1	179 aa		13.64	□□□□□ -0.23
ARID1A-204	ENST00000430799	CGNL1	Q0VF96	1302 aa		13.64	□□□□□ -0.23
ARID1A-204	ENST00000430799	ST18	O60284	1047 aa		13.64	□□□□□ -0.23
ARID1A-204	ENST00000430799	TRIM6-TRIM34	B2RNG4	842 aa		13.63	□□□□□ -0.23
ARID1A-204	ENST00000430799		E9PSI1	815 aa		13.63	□□□□□ -0.23
ARID1A-204	ENST00000430799	CLUAP1	Q96AJ1	413 aa		13.63	□□□□□ -0.23
ARID1A-204	ENST00000430799	EVC2	Q86UK5	1308 aa		13.62	□□□□□ -0.23
ARID1A-204	ENST00000430799	DHX57	Q6P158	1386 aa	Known RBP	13.62	□□□□□ -0.23
ARID1A-204	ENST00000430799	ATAD2B	Q9ULI0	1458 aa		13.62	□□□□□ -0.23
ARID1A-204	ENST00000430799	PTPRG	P23470	1445 aa		13.62	□□□□□ -0.23
ARID1A-204	ENST00000430799	TRAK1	Q9UPV9	953 aa		13.62	□□□□□ -0.23
ARID1A-204	ENST00000430799	SLC4A10	Q6U841	1118 aa		13.62	□□□□□ -0.23
ARID1A-204	ENST00000430799	CENPQ	Q7L2Z9	268 aa	Predicted RBP	13.62	□□□□□ -0.23
ARID1A-204	ENST00000430799	GOLGA6L3	A6NEY3	463 aa		13.61	□□□□□ -0.23
ARID1A-204	ENST00000430799	PRKRIP1	Q9H875	184 aa	Predicted RBP	13.61	□□□□□ -0.23
ARID1A-204	ENST00000430799	PANK3	Q9H999	370 aa		13.61	□□□□□ -0.23
ARID1A-204	ENST00000430799	CHMP3	Q9Y3E7	222 aa		13.6	□□□□□ -0.23
ARID1A-204	ENST00000430799	CCDC146	Q8IYE0	955 aa		13.6	□□□□□ -0.23
ARID1A-204	ENST00000430799	ZKSCAN2	Q63HK3	967 aa		13.6	□□□□□ -0.23
ARID1A-204	ENST00000430799	COG3	Q96JB2	828 aa		13.6	□□□□□ -0.23
ARID1A-204	ENST00000430799	CLSTN1	O94985	981 aa		13.59	□□□□□ -0.23
ARID1A-204	ENST00000430799	PHF14	O94880	888 aa		13.59	□□□□□ -0.23
ARID1A-204	ENST00000430799	USP35	Q9P2H5	1018 aa		13.59	□□□□□ -0.23
ARID1A-204	ENST00000430799	ZBED9	Q6R2W3	1325 aa		13.58	□□□□□ -0.24
ARID1A-204	ENST00000430799	KIF16B	Q96L93	1317 aa		13.58	□□□□□ -0.24
ARID1A-204	ENST00000430799	HSP90B1	P14625	803 aa	Known RBP	13.58	□□□□□ -0.24
ARID1A-204	ENST00000430799	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	13.57	□□□□□ -0.24	2e-7	■■□□□ 14.1
ARID1A-204	ENST00000430799	ATP6V1D	Q9Y5K8	247 aa		13.57	□□□□□ -0.24
ARID1A-204	ENST00000430799	USP47	Q96K76	1375 aa		13.56	□□□□□ -0.24
ARID1A-204	ENST00000430799	DDX11L8	A8MPP1	907 aa		13.56	□□□□□ -0.24
ARID1A-204	ENST00000430799	LRRFIP1	Q32MZ4	808 aa	Known RBP	13.56	□□□□□ -0.24
ARID1A-204	ENST00000430799	GZF1	Q9H116	711 aa	Predicted RBP	13.56	□□□□□ -0.24
ARID1A-204	ENST00000430799	FAM161A	Q3B820	660 aa		13.55	□□□□□ -0.24
ARID1A-204	ENST00000430799	TSHZ2	Q9NRE2	1034 aa		13.55	□□□□□ -0.24
ARID1A-204	ENST00000430799	MYOM3	Q5VTT5	1437 aa		13.55	□□□□□ -0.24
ARID1A-204	ENST00000430799	CCDC9	Q9Y3X0	531 aa	Known RBP	13.55	□□□□□ -0.24
ARID1A-204	ENST00000430799	GTF2E1	P29083	439 aa	Predicted RBP	13.54	□□□□□ -0.24
ARID1A-204	ENST00000430799	TEF	Q10587	303 aa		13.54	□□□□□ -0.24
ARID1A-204	ENST00000430799	NUTM2D	Q5VT03	806 aa	Predicted RBP	13.54	□□□□□ -0.24
ARID1A-204	ENST00000430799	API5	Q9BZZ5	524 aa	Known RBP	13.54	□□□□□ -0.24
ARID1A-204	ENST00000430799	C1orf141	Q5JVX7	400 aa		13.53	□□□□□ -0.24
ARID1A-204	ENST00000430799	FANCD2	Q9BXW9	1451 aa		13.53	□□□□□ -0.24
ARID1A-204	ENST00000430799	AAMP	Q13685	434 aa		13.53	□□□□□ -0.24
ARID1A-204	ENST00000430799	LTV1	Q96GA3	475 aa	Predicted RBP	13.53	□□□□□ -0.24
ARID1A-204	ENST00000430799	RASSF8	Q8NHQ8	419 aa		13.53	□□□□□ -0.24
ARID1A-204	ENST00000430799	DDX19B	Q9UMR2	479 aa		13.53	□□□□□ -0.24
ARID1A-204	ENST00000430799	NEXN	Q0ZGT2	675 aa		13.52	□□□□□ -0.24
ARID1A-204	ENST00000430799	RRP1	P56182	461 aa	Known RBP	13.52	□□□□□ -0.25
ARID1A-204	ENST00000430799	SKOR2	Q2VWA4	1001 aa	Predicted RBP	13.52	□□□□□ -0.25
ARID1A-204	ENST00000430799	SF3A1	Q15459	793 aa	Known RBP	13.51	□□□□□ -0.25
ARID1A-204	ENST00000430799	RUFY2	Q8WXA3	655 aa		13.51	□□□□□ -0.25
ARID1A-204	ENST00000430799	REC8	O95072	547 aa		13.51	□□□□□ -0.25
ARID1A-204	ENST00000430799	FRAT2	O75474	233 aa	Predicted RBP	13.5	□□□□□ -0.25
ARID1A-204	ENST00000430799	RRP7A	Q9Y3A4	280 aa	Known RBP	13.5	□□□□□ -0.25
ARID1A-204	ENST00000430799	CPLX2	Q6PUV4	134 aa	Known RBP	13.5	□□□□□ -0.25
ARID1A-204	ENST00000430799	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	13.5	□□□□□ -0.25	5e-8	■■■□□ 17.8
ARID1A-204	ENST00000430799	DIAPH1	O60610	1272 aa	Known RBP	13.5	□□□□□ -0.25
ARID1A-204	ENST00000430799	TOMM22	Q9NS69	142 aa		13.5	□□□□□ -0.25
ARID1A-204	ENST00000430799		G3V3G9	751 aa		13.5	□□□□□ -0.25
ARID1A-204	ENST00000430799	DCAF8	Q5TAQ9	597 aa		13.5	□□□□□ -0.25
ARID1A-204	ENST00000430799	PDE4A	P27815	886 aa		13.49	□□□□□ -0.25
ARID1A-204	ENST00000430799	ROCK1	Q13464	1354 aa		13.49	□□□□□ -0.25
ARID1A-204	ENST00000430799	WIZ	O95785	1651 aa		13.49	□□□□□ -0.25
ARID1A-204	ENST00000430799	ANKRD45	Q5TZF3	282 aa		13.48	□□□□□ -0.25
ARID1A-204	ENST00000430799	TPM3	P06753	285 aa		13.48	□□□□□ -0.25
ARID1A-204	ENST00000430799	NUTM2F	A1L443	756 aa		13.47	□□□□□ -0.25
ARID1A-204	ENST00000430799	APAF1	O14727	1248 aa		13.47	□□□□□ -0.25
ARID1A-204	ENST00000430799	TTC5	Q8N0Z6	440 aa		13.47	□□□□□ -0.25
ARID1A-204	ENST00000430799	NOC3L	Q8WTT2	800 aa	Known RBP	13.47	□□□□□ -0.25
ARID1A-204	ENST00000430799	ZKSCAN1	P17029	563 aa	Predicted RBP	13.47	□□□□□ -0.25
ARID1A-204	ENST00000430799	DIAPH3	Q9NSV4	1193 aa		13.47	□□□□□ -0.25
ARID1A-204	ENST00000430799	IGF1R	P08069	1367 aa		13.47	□□□□□ -0.25
ARID1A-204	ENST00000430799	ELL2	O00472	640 aa	Predicted RBP	13.47	□□□□□ -0.25
ARID1A-204	ENST00000430799	DDX58	O95786	925 aa	Known RBP	13.46	□□□□□ -0.25
ARID1A-204	ENST00000430799	FAM184A	Q8NB25	1140 aa		13.46	□□□□□ -0.25
ARID1A-204	ENST00000430799		H3BQV1	296 aa		13.46	□□□□□ -0.26
ARID1A-204	ENST00000430799	IFFO2	Q5TF58	517 aa		13.46	□□□□□ -0.26
ARID1A-204	ENST00000430799	OSCAR	Q8IYS5	282 aa		13.46	□□□□□ -0.26
ARID1A-204	ENST00000430799	MINK1	Q8N4C8	1332 aa	Predicted RBP	13.46	□□□□□ -0.26
ARID1A-204	ENST00000430799	DZIP1L	Q8IYY4	767 aa	Known RBP	13.46	□□□□□ -0.26
ARID1A-204	ENST00000430799	MIA2	Q96PC5	1412 aa		13.45	□□□□□ -0.26
ARID1A-204	ENST00000430799	NOL8	Q76FK4	1167 aa	Known RBP	13.45	□□□□□ -0.26
ARID1A-204	ENST00000430799	HSP90AB4P	Q58FF6	505 aa		13.45	□□□□□ -0.26
ARID1A-204	ENST00000430799	SYNE3	Q6ZMZ3	975 aa		13.45	□□□□□ -0.26
ARID1A-204	ENST00000430799	RILPL2	Q969X0	211 aa		13.45	□□□□□ -0.26
ARID1A-204	ENST00000430799	COG6	Q9Y2V7	657 aa		13.45	□□□□□ -0.26
ARID1A-204	ENST00000430799	GNAI1	P63096	354 aa		13.45	□□□□□ -0.26
ARID1A-204	ENST00000430799	AKAP17A	Q02040	695 aa	Known RBP	13.45	□□□□□ -0.26
ARID1A-204	ENST00000430799	MARCH6	O60337	910 aa		13.44	□□□□□ -0.26
ARID1A-204	ENST00000430799	BCL2L13	Q9BXK5	485 aa		13.44	□□□□□ -0.26
ARID1A-204	ENST00000430799	GOLGA6L1	Q8N7Z2	621 aa		13.44	□□□□□ -0.26
ARID1A-204	ENST00000430799	EXOC6	Q8TAG9	804 aa		13.44	□□□□□ -0.26
ARID1A-204	ENST00000430799	RUNDC1	Q96C34	613 aa		13.44	□□□□□ -0.26
ARID1A-204	ENST00000430799	C9orf78	Q9NZ63	289 aa	Predicted RBP	13.44	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms