RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 GGT6Q6P531 493 aa18.75■□□□□ 0.59
HDAC4-202ENST00000430200 MIA2Q96PC5 1412 aa18.74■□□□□ 0.59
HDAC4-202ENST00000430200 LTBP4Q8N2S1 1624 aa18.74■□□□□ 0.59
HDAC4-202ENST00000430200 ESF1Q9H501 851 aaKnown RBP18.74■□□□□ 0.59
HDAC4-202ENST00000430200 FBXO41Q8TF61 875 aa18.73■□□□□ 0.59
HDAC4-202ENST00000430200 ABCC3O15438 1527 aa18.73■□□□□ 0.59
HDAC4-202ENST00000430200 NEURL4Q96JN8 1562 aa18.72■□□□□ 0.59
HDAC4-202ENST00000430200 PZPP20742 1482 aa18.72■□□□□ 0.59
HDAC4-202ENST00000430200 DEPDC5O75140 1603 aa18.71■□□□□ 0.59
HDAC4-202ENST00000430200 PTPRTO14522 1441 aa18.71■□□□□ 0.59
HDAC4-202ENST00000430200 TCOF1Q13428 1488 aaKnown RBP18.71■□□□□ 0.59
HDAC4-202ENST00000430200 SHANK2Q9UPX8 1470 aa18.71■□□□□ 0.59
HDAC4-202ENST00000430200 CFAP65Q6ZU64 1925 aaKnown RBP18.7■□□□□ 0.58
HDAC4-202ENST00000430200 PRDM15P57071 1507 aaPredicted RBP18.69■□□□□ 0.58
HDAC4-202ENST00000430200 PLA2R1Q13018 1463 aa18.69■□□□□ 0.58
HDAC4-202ENST00000430200 ABCC5O15440 1437 aa18.68■□□□□ 0.58
HDAC4-202ENST00000430200 FGD6Q6ZV73 1430 aa18.68■□□□□ 0.58
HDAC4-202ENST00000430200 KIF3BO15066 747 aa18.68■□□□□ 0.58
HDAC4-202ENST00000430200 A2ML1A8K2U0 1454 aa18.68■□□□□ 0.58
HDAC4-202ENST00000430200 DUOX2Q9NRD8 1548 aa18.67■□□□□ 0.58
HDAC4-202ENST00000430200 SPATA31D1Q6ZQQ2 1576 aa18.66■□□□□ 0.58
HDAC4-202ENST00000430200 DAPK1P53355 1430 aa18.66■□□□□ 0.58
HDAC4-202ENST00000430200 CERKQ8TCT0 537 aa18.65■□□□□ 0.58
HDAC4-202ENST00000430200 RSPH4AQ5TD94 716 aa18.63■□□□□ 0.57
HDAC4-202ENST00000430200 FBXO31Q5XUX0 539 aaPredicted RBP18.63■□□□□ 0.57
HDAC4-202ENST00000430200 UBR1Q8IWV7 1749 aa18.63■□□□□ 0.57
HDAC4-202ENST00000430200 TNRQ92752 1358 aa18.62■□□□□ 0.57
HDAC4-202ENST00000430200 ERVK-7P63135 1459 aa18.61■□□□□ 0.57
HDAC4-202ENST00000430200 NCKAP5LQ9HCH0 1330 aa18.61■□□□□ 0.57
HDAC4-202ENST00000430200 PPP6R1Q9UPN7 881 aa18.61■□□□□ 0.57
HDAC4-202ENST00000430200 KIF15Q9NS87 1388 aa18.6■□□□□ 0.57
HDAC4-202ENST00000430200 TSPY4P0CV99 314 aa18.59■□□□□ 0.57
HDAC4-202ENST00000430200 TSPY10P0CW01 314 aa18.59■□□□□ 0.57
HDAC4-202ENST00000430200 ERBINQ96RT1 1412 aa18.58■□□□□ 0.57
HDAC4-202ENST00000430200 VWDEQ8N2E2 1590 aa18.58■□□□□ 0.56
HDAC4-202ENST00000430200 STRCP1A6NGW2 1772 aa18.58■□□□□ 0.56
HDAC4-202ENST00000430200 UGGT1Q9NYU2 1555 aa18.57■□□□□ 0.56
HDAC4-202ENST00000430200 WASHC2CQ9Y4E1 1318 aa18.56■□□□□ 0.56
HDAC4-202ENST00000430200 NLRP1Q9C000 1473 aa18.56■□□□□ 0.56
HDAC4-202ENST00000430200 IQGAP1P46940 1657 aa18.56■□□□□ 0.56
HDAC4-202ENST00000430200 ADGRL2O95490 1459 aa18.55■□□□□ 0.56
HDAC4-202ENST00000430200 DMRT2Q9Y5R5 561 aa18.55■□□□□ 0.56
HDAC4-202ENST00000430200 PIK3C2BO00750 1634 aa18.55■□□□□ 0.56
HDAC4-202ENST00000430200 ZNF335Q9H4Z2 1342 aaPredicted RBP18.54■□□□□ 0.56
HDAC4-202ENST00000430200 SYNMO15061 1565 aa18.53■□□□□ 0.56
HDAC4-202ENST00000430200 IQSEC2Q5JU85 1478 aa18.52■□□□□ 0.56
HDAC4-202ENST00000430200 EFCAB6Q5THR3 1501 aa18.51■□□□□ 0.55
HDAC4-202ENST00000430200 MYO5BQ9ULV0 1848 aa18.5■□□□□ 0.55
HDAC4-202ENST00000430200 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.5■□□□□ 0.55
HDAC4-202ENST00000430200 LMTK2Q8IWU2 1503 aa18.49■□□□□ 0.55
HDAC4-202ENST00000430200 RRP7BPQ9NSQ0 103 aa18.49■□□□□ 0.55
HDAC4-202ENST00000430200 UNC13BO14795 1591 aa18.48■□□□□ 0.55
HDAC4-202ENST00000430200 APLP2Q06481 763 aa18.48■□□□□ 0.55
HDAC4-202ENST00000430200 MED14O60244 1454 aa18.47■□□□□ 0.55
HDAC4-202ENST00000430200 ARHGAP31Q2M1Z3 1444 aa18.47■□□□□ 0.55
HDAC4-202ENST00000430200 ALKQ9UM73 1620 aa18.46■□□□□ 0.55
HDAC4-202ENST00000430200 PKD2Q13563 968 aa18.46■□□□□ 0.55
HDAC4-202ENST00000430200 CHIC2Q9UKJ5 165 aa18.46■□□□□ 0.55
HDAC4-202ENST00000430200 KDM5AP29375 1690 aaKnown RBP18.46■□□□□ 0.55
HDAC4-202ENST00000430200 GCC2Q8IWJ2 1684 aa18.46■□□□□ 0.55
HDAC4-202ENST00000430200 TET3O43151 1660 aa18.45■□□□□ 0.54
HDAC4-202ENST00000430200 XIRP1Q702N8 1843 aaKnown RBP18.45■□□□□ 0.54
HDAC4-202ENST00000430200 SLIT1O75093 1534 aa18.44■□□□□ 0.54
HDAC4-202ENST00000430200 ANKRD30AQ9BXX3 1397 aa18.43■□□□□ 0.54
HDAC4-202ENST00000430200 ARHGAP23Q9P227 1491 aa18.43■□□□□ 0.54
HDAC4-202ENST00000430200 NPHP4O75161 1426 aaPredicted RBP18.42■□□□□ 0.54
HDAC4-202ENST00000430200 E9PCH4 1651 aa18.42■□□□□ 0.54
HDAC4-202ENST00000430200 CPS1P31327 1500 aa18.4■□□□□ 0.54
HDAC4-202ENST00000430200 ADGRB3O60242 1522 aa18.39■□□□□ 0.54
HDAC4-202ENST00000430200 IQGAP3Q86VI3 1631 aa18.39■□□□□ 0.53
HDAC4-202ENST00000430200 FAM50AQ14320 339 aaKnown RBP18.38■□□□□ 0.53
HDAC4-202ENST00000430200 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.38■□□□□ 0.53
HDAC4-202ENST00000430200 SCAF11Q99590 1463 aaKnown RBP18.38■□□□□ 0.53
HDAC4-202ENST00000430200 NOS1P29475 1434 aa18.37■□□□□ 0.53
HDAC4-202ENST00000430200 ANKRD50Q9ULJ7 1429 aa18.37■□□□□ 0.53
HDAC4-202ENST00000430200 PPARGC1BQ86YN6 1023 aaKnown RBP18.34■□□□□ 0.53
HDAC4-202ENST00000430200 THEMISQ8N1K5 641 aaPredicted RBP18.33■□□□□ 0.52
HDAC4-202ENST00000430200 TMEM131LA2VDJ0 1609 aa18.33■□□□□ 0.52
HDAC4-202ENST00000430200 KANK1Q14678 1352 aa18.32■□□□□ 0.52
HDAC4-202ENST00000430200 ANKLE2Q86XL3 938 aa18.32■□□□□ 0.52
HDAC4-202ENST00000430200 LRRC7Q96NW7 1537 aa18.32■□□□□ 0.52
HDAC4-202ENST00000430200 LTKP29376 864 aa18.3■□□□□ 0.52
HDAC4-202ENST00000430200 RPRD2Q5VT52 1461 aaKnown RBP18.3■□□□□ 0.52
HDAC4-202ENST00000430200 ROCK1Q13464 1354 aa18.29■□□□□ 0.52
HDAC4-202ENST00000430200 SPHKAPQ2M3C7 1700 aa18.28■□□□□ 0.52
HDAC4-202ENST00000430200 TMEM2Q9UHN6 1383 aa18.28■□□□□ 0.52
HDAC4-202ENST00000430200 NWD1Q149M9 1564 aa18.26■□□□□ 0.51
HDAC4-202ENST00000430200 UBAP1LF5GYI3 381 aa18.26■□□□□ 0.51
HDAC4-202ENST00000430200 ZFYVE9O95405 1425 aa18.24■□□□□ 0.51
HDAC4-202ENST00000430200 IDI1Q13907 227 aa18.24■□□□□ 0.51
HDAC4-202ENST00000430200 RRBP1Q9P2E9 1410 aaKnown RBP18.23■□□□□ 0.51
HDAC4-202ENST00000430200 CHD2O14647 1828 aaKnown RBP18.22■□□□□ 0.51
HDAC4-202ENST00000430200 MED1Q15648 1581 aaPredicted RBP18.19■□□□□ 0.5
HDAC4-202ENST00000430200 TXNDC2Q86VQ3 553 aa18.19■□□□□ 0.5
HDAC4-202ENST00000430200 ITGAEP38570 1179 aa18.18■□□□□ 0.5
HDAC4-202ENST00000430200 CLTCL1P53675 1640 aa18.18■□□□□ 0.5
HDAC4-202ENST00000430200 NRXN3Q9Y4C0 1643 aa18.18■□□□□ 0.5
HDAC4-202ENST00000430200 DISP3Q9P2K9 1392 aa18.17■□□□□ 0.5
HDAC4-202ENST00000430200 ILDR2Q71H61 639 aa18.15■□□□□ 0.5
HDAC4-202ENST00000430200 PIP4K2BP78356 416 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms