RNA–Protein interactions for RNA: ENST00000430085.5

CALD1-207, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-207ENST00000430085 ATP7AQ04656 1500 aa20.44■□□□□ 0.86
CALD1-207ENST00000430085 INO80Q9ULG1 1556 aaPredicted RBP20.43■□□□□ 0.86
CALD1-207ENST00000430085 MYT1LQ9UL68 1186 aa20.43■□□□□ 0.86
CALD1-207ENST00000430085 KDM5CP41229 1560 aa20.42■□□□□ 0.86
CALD1-207ENST00000430085 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.41■□□□□ 0.864e-7■■■■□ 20
CALD1-207ENST00000430085 ZMYM4Q5VZL5 1548 aa20.41■□□□□ 0.86
CALD1-207ENST00000430085 L3MBTL2Q969R5 705 aa20.4■□□□□ 0.86
CALD1-207ENST00000430085 IQGAP3Q86VI3 1631 aa20.39■□□□□ 0.86
CALD1-207ENST00000430085 MAGI2Q86UL8 1455 aa20.38■□□□□ 0.85
CALD1-207ENST00000430085 HECW2Q9P2P5 1572 aa20.38■□□□□ 0.85
CALD1-207ENST00000430085 KIDINS220Q9ULH0 1771 aa20.35■□□□□ 0.85
CALD1-207ENST00000430085 MLH3Q9UHC1 1453 aa20.34■□□□□ 0.85
CALD1-207ENST00000430085 YEATS2Q9ULM3 1422 aa20.33■□□□□ 0.85
CALD1-207ENST00000430085 ARHGEF40Q8TER5 1519 aa20.32■□□□□ 0.84
CALD1-207ENST00000430085 ABCA6Q8N139 1617 aa20.31■□□□□ 0.84
CALD1-207ENST00000430085 DHX29Q7Z478 1369 aaKnown RBP20.31■□□□□ 0.84
CALD1-207ENST00000430085 EIF2AK4Q9P2K8 1649 aaKnown RBP20.3■□□□□ 0.84
CALD1-207ENST00000430085 DIP2CQ9Y2E4 1556 aa20.29■□□□□ 0.84
CALD1-207ENST00000430085 DEPDC5O75140 1603 aa20.29■□□□□ 0.84
CALD1-207ENST00000430085 CCDC144AA2RUR9 1427 aa20.27■□□□□ 0.84
CALD1-207ENST00000430085 KIF3BO15066 747 aa20.27■□□□□ 0.84
CALD1-207ENST00000430085 KANK1Q14678 1352 aa20.27■□□□□ 0.84
CALD1-207ENST00000430085 SIGLEC1Q9BZZ2 1709 aa20.25■□□□□ 0.83
CALD1-207ENST00000430085 A2MP01023 1474 aa20.25■□□□□ 0.83
CALD1-207ENST00000430085 HIRIP3Q9BW71 556 aaPredicted RBP20.25■□□□□ 0.83
CALD1-207ENST00000430085 ATP10AO60312 1499 aa20.24■□□□□ 0.83
CALD1-207ENST00000430085 NBPF8Q3BBV2 869 aa20.23■□□□□ 0.83
CALD1-207ENST00000430085 MIER1Q8N108 512 aa20.22■□□□□ 0.83
CALD1-207ENST00000430085 PRDM15P57071 1507 aaPredicted RBP20.22■□□□□ 0.83
CALD1-207ENST00000430085 PLA2R1Q13018 1463 aa20.22■□□□□ 0.83
CALD1-207ENST00000430085 TET3O43151 1660 aa20.2■□□□□ 0.82
CALD1-207ENST00000430085 EIF4G2P78344 907 aaKnown RBP eCLIP20.2■□□□□ 0.82
CALD1-207ENST00000430085 VWDEQ8N2E2 1590 aa20.2■□□□□ 0.82
CALD1-207ENST00000430085 E9PCH4 1651 aa20.2■□□□□ 0.82
CALD1-207ENST00000430085 REREQ9P2R6 1566 aa20.19■□□□□ 0.82
CALD1-207ENST00000430085 MROH1Q8NDA8 1641 aa20.18■□□□□ 0.82
CALD1-207ENST00000430085 ZNF326Q5BKZ1 582 aaKnown RBP20.18■□□□□ 0.82
CALD1-207ENST00000430085 HSPA5P11021 654 aaKnown RBP20.17■□□□□ 0.82
CALD1-207ENST00000430085 RNF17Q9BXT8 1623 aaKnown RBP20.16■□□□□ 0.82
CALD1-207ENST00000430085 UHRF1BP1Q6BDS2 1440 aa20.16■□□□□ 0.82
CALD1-207ENST00000430085 DCAF11Q8TEB1 546 aa20.15■□□□□ 0.82
CALD1-207ENST00000430085 DDX10Q13206 875 aaKnown RBP20.14■□□□□ 0.81
CALD1-207ENST00000430085 SPHKAPQ2M3C7 1700 aa20.14■□□□□ 0.81
CALD1-207ENST00000430085 KDM2AQ9Y2K7 1162 aa20.14■□□□□ 0.81
CALD1-207ENST00000430085 ARID4BQ4LE39 1312 aaPredicted RBP20.13■□□□□ 0.81
CALD1-207ENST00000430085 TRPM2O94759 1503 aa20.13■□□□□ 0.81
CALD1-207ENST00000430085 BCORL1Q5H9F3 1711 aa20.13■□□□□ 0.81
CALD1-207ENST00000430085 RGL3Q3MIN7 710 aa20.12■□□□□ 0.81
CALD1-207ENST00000430085 AGLP35573 1532 aa20.11■□□□□ 0.81
CALD1-207ENST00000430085 PTPRTO14522 1441 aa20.11■□□□□ 0.81
CALD1-207ENST00000430085 EFCAB6Q5THR3 1501 aa20.1■□□□□ 0.81
CALD1-207ENST00000430085 LMTK2Q8IWU2 1503 aa20.1■□□□□ 0.81
CALD1-207ENST00000430085 RALGAPBQ86X10 1494 aa20.1■□□□□ 0.81
CALD1-207ENST00000430085 GGT6Q6P531 493 aa20.08■□□□□ 0.81
CALD1-207ENST00000430085 CEP152O94986 1710 aa20.08■□□□□ 0.81
CALD1-207ENST00000430085 MLECQ14165 292 aa20.08■□□□□ 0.8
CALD1-207ENST00000430085 SPATA31E1Q6ZUB1 1445 aa20.05■□□□□ 0.8
CALD1-207ENST00000430085 CLTCL1P53675 1640 aa20.05■□□□□ 0.8
CALD1-207ENST00000430085 PRAG1Q86YV5 1406 aa20.04■□□□□ 0.8
CALD1-207ENST00000430085 USP47Q96K76 1375 aa20.04■□□□□ 0.8
CALD1-207ENST00000430085 WASHC2CQ9Y4E1 1318 aa20.03■□□□□ 0.8
CALD1-207ENST00000430085 ADAMTSL3P82987 1691 aa20.03■□□□□ 0.8
CALD1-207ENST00000430085 CARD11Q9BXL7 1154 aa20.02■□□□□ 0.8
CALD1-207ENST00000430085 ABCC3O15438 1527 aa20.01■□□□□ 0.79
CALD1-207ENST00000430085 WASHC2AQ641Q2 1341 aa20.01■□□□□ 0.79
CALD1-207ENST00000430085 FER1L4A9Z1Z3 1794 aa20.01■□□□□ 0.79
CALD1-207ENST00000430085 ROCK2O75116 1388 aaKnown RBP20.01■□□□□ 0.79
CALD1-207ENST00000430085 MADDQ8WXG6 1647 aa20■□□□□ 0.79
CALD1-207ENST00000430085 TRPM1Q7Z4N2 1603 aa20■□□□□ 0.79
CALD1-207ENST00000430085 CAMSAP1Q5T5Y3 1602 aa19.97■□□□□ 0.79
CALD1-207ENST00000430085 NPATQ14207 1427 aa19.97■□□□□ 0.79
CALD1-207ENST00000430085 ZC3H13Q5T200 1668 aaKnown RBP19.97■□□□□ 0.79
CALD1-207ENST00000430085 NEURL4Q96JN8 1562 aa19.97■□□□□ 0.79
CALD1-207ENST00000430085 CCDC7Q96M83 1385 aa19.97■□□□□ 0.79
CALD1-207ENST00000430085 RIMS1Q86UR5 1692 aaKnown RBP19.97■□□□□ 0.79
CALD1-207ENST00000430085 POLR1AO95602 1720 aaPredicted RBP19.96■□□□□ 0.79
CALD1-207ENST00000430085 KDM4FA0A1W2PPD8 638 aa19.96■□□□□ 0.79
CALD1-207ENST00000430085 CLTCQ00610 1675 aaKnown RBP19.96■□□□□ 0.79
CALD1-207ENST00000430085 STAC3Q96MF2 364 aa19.96■□□□□ 0.79
CALD1-207ENST00000430085 UGGT1Q9NYU2 1555 aa19.95■□□□□ 0.78
CALD1-207ENST00000430085 KIF1BO60333 1816 aa19.95■□□□□ 0.78
CALD1-207ENST00000430085 ANP32CO43423 234 aa19.94■□□□□ 0.78
CALD1-207ENST00000430085 C11orf95C9JLR9 678 aaPredicted RBP19.94■□□□□ 0.78
CALD1-207ENST00000430085 YTHDC1Q96MU7 727 aaKnown RBP19.94■□□□□ 0.78
CALD1-207ENST00000430085 CNTLNQ9NXG0 1405 aa19.94■□□□□ 0.78
CALD1-207ENST00000430085 CENPBP07199 599 aaPredicted RBP19.93■□□□□ 0.78
CALD1-207ENST00000430085 KIF7Q2M1P5 1343 aa19.92■□□□□ 0.78
CALD1-207ENST00000430085 LAMC1P11047 1609 aa19.91■□□□□ 0.78
CALD1-207ENST00000430085 GPRASP1Q5JY77 1395 aa19.91■□□□□ 0.78
CALD1-207ENST00000430085 ESF1Q9H501 851 aaKnown RBP19.9■□□□□ 0.78
CALD1-207ENST00000430085 NBPF1Q3BBV0 1214 aa19.9■□□□□ 0.78
CALD1-207ENST00000430085 CFAP65Q6ZU64 1925 aaKnown RBP19.89■□□□□ 0.78
CALD1-207ENST00000430085 ARHGAP31Q2M1Z3 1444 aa19.89■□□□□ 0.78
CALD1-207ENST00000430085 PPP6R1Q9UPN7 881 aa19.89■□□□□ 0.77
CALD1-207ENST00000430085 MROH2AA6NES4 1674 aa19.88■□□□□ 0.77
CALD1-207ENST00000430085 ST20-MTHFSA0A0A6YYL1 179 aa19.88■□□□□ 0.77
CALD1-207ENST00000430085 C3P01024 1663 aa19.87■□□□□ 0.77
CALD1-207ENST00000430085 NOS1P29475 1434 aa19.86■□□□□ 0.77
CALD1-207ENST00000430085 ADGRB3O60242 1522 aa19.86■□□□□ 0.77
CALD1-207ENST00000430085 CHGAP10645 457 aaKnown RBP19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms