RNA–Protein interactions for RNA: ENST00000429968.5

RBM39-212, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,149 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-212ENST00000429968 DUOX2Q9NRD8 1548 aa19.45■□□□□ 0.7
RBM39-212ENST00000429968 KDM2AQ9Y2K7 1162 aa19.45■□□□□ 0.7
RBM39-212ENST00000429968 MAGI2Q86UL8 1455 aa19.43■□□□□ 0.7
RBM39-212ENST00000429968 EFCAB2Q5VUJ9 269 aa19.42■□□□□ 0.7
RBM39-212ENST00000429968 WDR7Q9Y4E6 1490 aa19.41■□□□□ 0.7
RBM39-212ENST00000429968 DCAF11Q8TEB1 546 aa19.41■□□□□ 0.7
RBM39-212ENST00000429968 ABCA9Q8IUA7 1624 aa19.4■□□□□ 0.7
RBM39-212ENST00000429968 ZFYVE16Q7Z3T8 1539 aa19.4■□□□□ 0.7
RBM39-212ENST00000429968 PRKRIP1Q9H875 184 aaPredicted RBP19.4■□□□□ 0.7
RBM39-212ENST00000429968 TRPM1Q7Z4N2 1603 aa19.4■□□□□ 0.7
RBM39-212ENST00000429968 AFAP1Q8N556 730 aa19.39■□□□□ 0.69
RBM39-212ENST00000429968 ERBINQ96RT1 1412 aa19.39■□□□□ 0.69
RBM39-212ENST00000429968 CCDC144AA2RUR9 1427 aa19.38■□□□□ 0.69
RBM39-212ENST00000429968 ARAP3Q8WWN8 1544 aa19.37■□□□□ 0.69
RBM39-212ENST00000429968 PLPPR3Q6T4P5 718 aa19.37■□□□□ 0.69
RBM39-212ENST00000429968 DHX29Q7Z478 1369 aaKnown RBP19.37■□□□□ 0.69
RBM39-212ENST00000429968 A2MP01023 1474 aa19.37■□□□□ 0.69
RBM39-212ENST00000429968 CARD11Q9BXL7 1154 aa19.36■□□□□ 0.69
RBM39-212ENST00000429968 E9PCH4 1651 aa19.36■□□□□ 0.69
RBM39-212ENST00000429968 RGL3Q3MIN7 710 aa19.35■□□□□ 0.69
RBM39-212ENST00000429968 POLR3GLQ9BT43 218 aa19.34■□□□□ 0.69
RBM39-212ENST00000429968 RTN4Q9NQC3 1192 aaKnown RBP19.34■□□□□ 0.69
RBM39-212ENST00000429968 PRAG1Q86YV5 1406 aa19.34■□□□□ 0.69
RBM39-212ENST00000429968 FANCAO15360 1455 aa19.33■□□□□ 0.68
RBM39-212ENST00000429968 INO80Q9ULG1 1556 aaPredicted RBP19.33■□□□□ 0.68
RBM39-212ENST00000429968 ASXL2Q76L83 1435 aa19.32■□□□□ 0.68
RBM39-212ENST00000429968 HNRNPUQ00839 825 aaKnown RBP eCLIP19.32■□□□□ 0.68
RBM39-212ENST00000429968 ST20-MTHFSA0A0A6YYL1 179 aa19.31■□□□□ 0.68
RBM39-212ENST00000429968 SPAG9O60271 1321 aaKnown RBP19.31■□□□□ 0.68
RBM39-212ENST00000429968 DEPDC5O75140 1603 aa19.31■□□□□ 0.68
RBM39-212ENST00000429968 CNGB1Q14028 1251 aaPredicted RBP19.3■□□□□ 0.68
RBM39-212ENST00000429968 NBPF1Q3BBV0 1214 aa19.3■□□□□ 0.68
RBM39-212ENST00000429968 ROCK2O75116 1388 aaKnown RBP19.29■□□□□ 0.68
RBM39-212ENST00000429968 ATP10AO60312 1499 aa19.29■□□□□ 0.68
RBM39-212ENST00000429968 ATP7AQ04656 1500 aa19.29■□□□□ 0.68
RBM39-212ENST00000429968 RTEL1-TNFRSF6BF6WH68 1400 aa19.28■□□□□ 0.68
RBM39-212ENST00000429968 FKBP8Q14318 412 aa19.28■□□□□ 0.68
RBM39-212ENST00000429968 BCANQ96GW7 911 aa19.28■□□□□ 0.68
RBM39-212ENST00000429968 ADGRL1O94910 1474 aa19.26■□□□□ 0.67
RBM39-212ENST00000429968 SPHKAPQ2M3C7 1700 aa19.26■□□□□ 0.67
RBM39-212ENST00000429968 MRS2Q9HD23 443 aa19.26■□□□□ 0.67
RBM39-212ENST00000429968 FAM9BQ8IZU0 186 aa19.25■□□□□ 0.67
RBM39-212ENST00000429968 SCAPERQ9BY12 1400 aa19.24■□□□□ 0.67
RBM39-212ENST00000429968 MROH1Q8NDA8 1641 aa19.24■□□□□ 0.67
RBM39-212ENST00000429968 KIDINS220Q9ULH0 1771 aa19.23■□□□□ 0.67
RBM39-212ENST00000429968 CLTCL1P53675 1640 aa19.23■□□□□ 0.67
RBM39-212ENST00000429968 CEP152O94986 1710 aa19.23■□□□□ 0.67
RBM39-212ENST00000429968 PRDM15P57071 1507 aaPredicted RBP19.23■□□□□ 0.67
RBM39-212ENST00000429968 TET3O43151 1660 aa19.21■□□□□ 0.67
RBM39-212ENST00000429968 LAMC1P11047 1609 aa19.21■□□□□ 0.67
RBM39-212ENST00000429968 RNF17Q9BXT8 1623 aaKnown RBP19.21■□□□□ 0.67
RBM39-212ENST00000429968 GPRASP1Q5JY77 1395 aa19.21■□□□□ 0.67
RBM39-212ENST00000429968 VWDEQ8N2E2 1590 aa19.21■□□□□ 0.67
RBM39-212ENST00000429968 ARID4BQ4LE39 1312 aaPredicted RBP19.21■□□□□ 0.67
RBM39-212ENST00000429968 TRPM2O94759 1503 aa19.21■□□□□ 0.67
RBM39-212ENST00000429968 OSCARQ8IYS5 282 aa19.21■□□□□ 0.67
RBM39-212ENST00000429968 MADDQ8WXG6 1647 aa19.19■□□□□ 0.66
RBM39-212ENST00000429968 EIF2AK4Q9P2K8 1649 aaKnown RBP19.18■□□□□ 0.66
RBM39-212ENST00000429968 UGGT1Q9NYU2 1555 aa19.16■□□□□ 0.66
RBM39-212ENST00000429968 PTPRTO14522 1441 aa19.16■□□□□ 0.66
RBM39-212ENST00000429968 ARXQ96QS3 562 aa19.16■□□□□ 0.66
RBM39-212ENST00000429968 KIF3BO15066 747 aa19.15■□□□□ 0.66
RBM39-212ENST00000429968 DISP3Q9P2K9 1392 aa19.15■□□□□ 0.66
RBM39-212ENST00000429968 TESK2Q96S53 571 aa19.14■□□□□ 0.65
RBM39-212ENST00000429968 MYT1LQ9UL68 1186 aa19.13■□□□□ 0.65
RBM39-212ENST00000429968 COL17A1Q9UMD9 1497 aaPredicted RBP19.13■□□□□ 0.65
RBM39-212ENST00000429968 IQGAP1P46940 1657 aa19.12■□□□□ 0.65
RBM39-212ENST00000429968 PPRC1Q5VV67 1664 aaKnown RBP19.12■□□□□ 0.65
RBM39-212ENST00000429968 SENP3-EIF4A1A0A087X0R7 540 aa19.1■□□□□ 0.65
RBM39-212ENST00000429968 CFAP65Q6ZU64 1925 aaKnown RBP19.1■□□□□ 0.65
RBM39-212ENST00000429968 IRX6P78412 446 aaPredicted RBP19.1■□□□□ 0.65
RBM39-212ENST00000429968 MROH2AA6NES4 1674 aa19.1■□□□□ 0.65
RBM39-212ENST00000429968 FRMPD1Q5SYB0 1578 aa19.09■□□□□ 0.65
RBM39-212ENST00000429968 ZBED9Q6R2W3 1325 aa19.09■□□□□ 0.65
RBM39-212ENST00000429968 ZNF518AQ6AHZ1 1483 aa19.09■□□□□ 0.65
RBM39-212ENST00000429968 CD109Q6YHK3 1445 aa19.08■□□□□ 0.65
RBM39-212ENST00000429968 EFCAB6Q5THR3 1501 aa19.08■□□□□ 0.64
RBM39-212ENST00000429968 NEFLP07196 543 aa19.07■□□□□ 0.64
RBM39-212ENST00000429968 EIF5BO60841 1220 aaKnown RBP19.07■□□□□ 0.64
RBM39-212ENST00000429968 POGZQ7Z3K3 1410 aa19.06■□□□□ 0.64
RBM39-212ENST00000429968 ABCA6Q8N139 1617 aa19.06■□□□□ 0.64
RBM39-212ENST00000429968 NPM1P06748 294 aaKnown RBP eCLIP19.06■□□□□ 0.64
RBM39-212ENST00000429968 KANK1Q14678 1352 aa19.06■□□□□ 0.64
RBM39-212ENST00000429968 KIF1BO60333 1816 aa19.05■□□□□ 0.64
RBM39-212ENST00000429968 IFT172Q9UG01 1749 aa19.05■□□□□ 0.64
RBM39-212ENST00000429968 CFAP74Q9C0B2 1584 aa19.04■□□□□ 0.64
RBM39-212ENST00000429968 PER1O15534 1290 aaPredicted RBP19.04■□□□□ 0.64
RBM39-212ENST00000429968 PNISRQ8TF01 805 aaKnown RBP19.04■□□□□ 0.64
RBM39-212ENST00000429968 HECW2Q9P2P5 1572 aa19.04■□□□□ 0.64
RBM39-212ENST00000429968 TSHZ2Q9NRE2 1034 aa19.03■□□□□ 0.64
RBM39-212ENST00000429968 PARD3Q8TEW0 1356 aa19■□□□□ 0.63
RBM39-212ENST00000429968 MAP3K4Q9Y6R4 1608 aa19■□□□□ 0.63
RBM39-212ENST00000429968 MYBBP1AQ9BQG0 1328 aaKnown RBP19■□□□□ 0.63
RBM39-212ENST00000429968 LMTK2Q8IWU2 1503 aa18.99■□□□□ 0.63
RBM39-212ENST00000429968 MLH3Q9UHC1 1453 aa18.99■□□□□ 0.63
RBM39-212ENST00000429968 TMC1Q8TDI8 760 aa18.98■□□□□ 0.63
RBM39-212ENST00000429968 NEURL4Q96JN8 1562 aa18.98■□□□□ 0.63
RBM39-212ENST00000429968 KIAA1210Q9ULL0 1709 aa18.98■□□□□ 0.63
RBM39-212ENST00000429968 LRPPRCP42704 1394 aaKnown RBP18.98■□□□□ 0.63
RBM39-212ENST00000429968 RAPGEF3O95398 923 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms