RNA–Protein interactions for RNA: ENST00000429544.6

MBD4-203, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD4, Length 2,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-203ENST00000429544 SPAG9O60271 1321 aaKnown RBP22.58■■□□□ 1.21
MBD4-203ENST00000429544 FANCAO15360 1455 aa22.57■■□□□ 1.2
MBD4-203ENST00000429544 PLA2R1Q13018 1463 aa22.57■■□□□ 1.2
MBD4-203ENST00000429544 ASXL2Q76L83 1435 aa22.57■■□□□ 1.2
MBD4-203ENST00000429544 DCAF11Q8TEB1 546 aa22.57■■□□□ 1.2
MBD4-203ENST00000429544 OSCARQ8IYS5 282 aa22.56■■□□□ 1.2
MBD4-203ENST00000429544 AFAP1Q8N556 730 aa22.56■■□□□ 1.2
MBD4-203ENST00000429544 RTEL1-TNFRSF6BF6WH68 1400 aa22.54■■□□□ 1.2
MBD4-203ENST00000429544 CARD11Q9BXL7 1154 aa22.52■■□□□ 1.2
MBD4-203ENST00000429544 INO80Q9ULG1 1556 aaPredicted RBP22.52■■□□□ 1.19
MBD4-203ENST00000429544 ATP7AQ04656 1500 aa22.5■■□□□ 1.19
MBD4-203ENST00000429544 ADGRL1O94910 1474 aa22.5■■□□□ 1.19
MBD4-203ENST00000429544 TRPM1Q7Z4N2 1603 aa22.49■■□□□ 1.19
MBD4-203ENST00000429544 RGL3Q3MIN7 710 aa22.48■■□□□ 1.19
MBD4-203ENST00000429544 PRAG1Q86YV5 1406 aa22.47■■□□□ 1.19
MBD4-203ENST00000429544 ATP10AO60312 1499 aa22.47■■□□□ 1.19
MBD4-203ENST00000429544 A2MP01023 1474 aa22.47■■□□□ 1.19
MBD4-203ENST00000429544 SCAPERQ9BY12 1400 aa22.47■■□□□ 1.19
MBD4-203ENST00000429544 E9PCH4 1651 aa22.46■■□□□ 1.19
MBD4-203ENST00000429544 POLR3GLQ9BT43 218 aa22.46■■□□□ 1.19
MBD4-203ENST00000429544 PRKRIP1Q9H875 184 aaPredicted RBP22.46■■□□□ 1.19
MBD4-203ENST00000429544 DEPDC5O75140 1603 aa22.46■■□□□ 1.19
MBD4-203ENST00000429544 ROCK2O75116 1388 aaKnown RBP22.45■■□□□ 1.18
MBD4-203ENST00000429544 NPM1P06748 294 aaKnown RBP eCLIP22.45■■□□□ 1.18
MBD4-203ENST00000429544 SUPT16HQ9Y5B9 1047 aaKnown RBP22.43■■□□□ 1.18
MBD4-203ENST00000429544 MYT1LQ9UL68 1186 aa22.42■■□□□ 1.18
MBD4-203ENST00000429544 ARID4BQ4LE39 1312 aaPredicted RBP22.41■■□□□ 1.18
MBD4-203ENST00000429544 CCDC184Q52MB2 194 aa22.4■■□□□ 1.18
MBD4-203ENST00000429544 ST20-MTHFSA0A0A6YYL1 179 aa22.4■■□□□ 1.18
MBD4-203ENST00000429544 SPHKAPQ2M3C7 1700 aa22.39■■□□□ 1.17
MBD4-203ENST00000429544 TET3O43151 1660 aa22.39■■□□□ 1.17
MBD4-203ENST00000429544 DHX29Q7Z478 1369 aaKnown RBP22.38■■□□□ 1.17
MBD4-203ENST00000429544 EIF2AK4Q9P2K8 1649 aaKnown RBP22.38■■□□□ 1.17
MBD4-203ENST00000429544 KIDINS220Q9ULH0 1771 aa22.37■■□□□ 1.17
MBD4-203ENST00000429544 HNRNPUQ00839 825 aaKnown RBP eCLIP22.36■■□□□ 1.17
MBD4-203ENST00000429544 TRPM2O94759 1503 aa22.36■■□□□ 1.17
MBD4-203ENST00000429544 VWDEQ8N2E2 1590 aa22.35■■□□□ 1.17
MBD4-203ENST00000429544 CFAP74Q9C0B2 1584 aa22.35■■□□□ 1.17
MBD4-203ENST00000429544 LAMC1P11047 1609 aa22.35■■□□□ 1.17
MBD4-203ENST00000429544 NBPF1Q3BBV0 1214 aa22.35■■□□□ 1.17
MBD4-203ENST00000429544 CEP152O94986 1710 aa22.35■■□□□ 1.17
MBD4-203ENST00000429544 KANK1Q14678 1352 aa22.35■■□□□ 1.17
MBD4-203ENST00000429544 KIF3BO15066 747 aa22.34■■□□□ 1.17
MBD4-203ENST00000429544 MRS2Q9HD23 443 aa22.34■■□□□ 1.17
MBD4-203ENST00000429544 GPRASP1Q5JY77 1395 aa22.33■■□□□ 1.17
MBD4-203ENST00000429544 CD109Q6YHK3 1445 aa22.33■■□□□ 1.17
MBD4-203ENST00000429544 MROH1Q8NDA8 1641 aa22.33■■□□□ 1.17
MBD4-203ENST00000429544 CLTCL1P53675 1640 aa22.33■■□□□ 1.16
MBD4-203ENST00000429544 PRDM15P57071 1507 aaPredicted RBP22.33■■□□□ 1.16
MBD4-203ENST00000429544 ZNF518AQ6AHZ1 1483 aa22.33■■□□□ 1.16
MBD4-203ENST00000429544 PTPRTO14522 1441 aa22.31■■□□□ 1.16
MBD4-203ENST00000429544 CNGB1Q14028 1251 aaPredicted RBP22.3■■□□□ 1.16
MBD4-203ENST00000429544 RNF17Q9BXT8 1623 aaKnown RBP22.29■■□□□ 1.16
MBD4-203ENST00000429544 FAM9BQ8IZU0 186 aa22.28■■□□□ 1.16
MBD4-203ENST00000429544 MADDQ8WXG6 1647 aa22.27■■□□□ 1.16
MBD4-203ENST00000429544 POGZQ7Z3K3 1410 aa22.27■■□□□ 1.16
MBD4-203ENST00000429544 FKBP8Q14318 412 aa22.23■■□□□ 1.15
MBD4-203ENST00000429544 HECW2Q9P2P5 1572 aa22.23■■□□□ 1.15
MBD4-203ENST00000429544 EFCAB6Q5THR3 1501 aa22.22■■□□□ 1.15
MBD4-203ENST00000429544 COL17A1Q9UMD9 1497 aaPredicted RBP22.22■■□□□ 1.15
MBD4-203ENST00000429544 PPRC1Q5VV67 1664 aaKnown RBP22.21■■□□□ 1.15
MBD4-203ENST00000429544 PELP1Q8IZL8 1130 aaKnown RBP22.21■■□□□ 1.15
MBD4-203ENST00000429544 NEFLP07196 543 aa22.2■■□□□ 1.14
MBD4-203ENST00000429544 MLH3Q9UHC1 1453 aa22.19■■□□□ 1.14
MBD4-203ENST00000429544 FRMPD1Q5SYB0 1578 aa22.19■■□□□ 1.14
MBD4-203ENST00000429544 UGGT1Q9NYU2 1555 aa22.19■■□□□ 1.14
MBD4-203ENST00000429544 IQGAP1P46940 1657 aa22.18■■□□□ 1.14
MBD4-203ENST00000429544 ABCA6Q8N139 1617 aa22.18■■□□□ 1.14
MBD4-203ENST00000429544 TESK2Q96S53 571 aa22.18■■□□□ 1.14
MBD4-203ENST00000429544 DISP3Q9P2K9 1392 aa22.17■■□□□ 1.14
MBD4-203ENST00000429544 KIF1BO60333 1816 aa22.17■■□□□ 1.14
MBD4-203ENST00000429544 BCANQ96GW7 911 aa22.17■■□□□ 1.14
MBD4-203ENST00000429544 LMTK2Q8IWU2 1503 aa22.16■■□□□ 1.14
MBD4-203ENST00000429544 NEO1Q92859 1461 aa22.16■■□□□ 1.14
MBD4-203ENST00000429544 NEURL4Q96JN8 1562 aa22.14■■□□□ 1.14
MBD4-203ENST00000429544 MROH2AA6NES4 1674 aa22.13■■□□□ 1.13
MBD4-203ENST00000429544 STAC3Q96MF2 364 aa22.12■■□□□ 1.13
MBD4-203ENST00000429544 ZBED9Q6R2W3 1325 aa22.12■■□□□ 1.13
MBD4-203ENST00000429544 MAP3K4Q9Y6R4 1608 aa22.11■■□□□ 1.13
MBD4-203ENST00000429544 TMF1P82094 1093 aa22.11■■□□□ 1.13
MBD4-203ENST00000429544 CFAP65Q6ZU64 1925 aaKnown RBP22.1■■□□□ 1.13
MBD4-203ENST00000429544 KIAA1210Q9ULL0 1709 aa22.1■■□□□ 1.13
MBD4-203ENST00000429544 IFT172Q9UG01 1749 aa22.1■■□□□ 1.13
MBD4-203ENST00000429544 RAPGEF3O95398 923 aa22.09■■□□□ 1.13
MBD4-203ENST00000429544 KTN1Q86UP2 1357 aaKnown RBP22.09■■□□□ 1.13
MBD4-203ENST00000429544 GGT6Q6P531 493 aa22.08■■□□□ 1.13
MBD4-203ENST00000429544 RICTORQ6R327 1708 aa22.08■■□□□ 1.13
MBD4-203ENST00000429544 RALBP1Q15311 655 aa22.08■■□□□ 1.13
MBD4-203ENST00000429544 CYB5RLQ6IPT4 315 aa22.08■■□□□ 1.13
MBD4-203ENST00000429544 MYBBP1AQ9BQG0 1328 aaKnown RBP22.08■■□□□ 1.13
MBD4-203ENST00000429544 SCAF11Q99590 1463 aaKnown RBP22.08■■□□□ 1.12
MBD4-203ENST00000429544 TMC1Q8TDI8 760 aa22.07■■□□□ 1.12
MBD4-203ENST00000429544 MYOM2P54296 1465 aa22.07■■□□□ 1.12
MBD4-203ENST00000429544 DIP2CQ9Y2E4 1556 aa22.07■■□□□ 1.12
MBD4-203ENST00000429544 RIMBP3CA6NJZ7 1639 aa22.06■■□□□ 1.12
MBD4-203ENST00000429544 RIMBP3BA6NNM3 1639 aa22.06■■□□□ 1.12
MBD4-203ENST00000429544 RIMBP3Q9UFD9 1639 aa22.06■■□□□ 1.12
MBD4-203ENST00000429544 NPATQ14207 1427 aa22.05■■□□□ 1.12
MBD4-203ENST00000429544 ABCC3O15438 1527 aa22.05■■□□□ 1.12
MBD4-203ENST00000429544 BRD4O60885 1362 aaPredicted RBP22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms