RNA–Protein interactions for RNA: ENST00000429436.6

MARK3-205, Transcript of microtubule affinity regulating kinase 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene MARK3, Length 3,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-205ENST00000429436 SKAP1Q86WV1 359 aa19.55■□□□□ 0.72
MARK3-205ENST00000429436 SMG6Q86US8 1419 aaKnown RBP19.54■□□□□ 0.72
MARK3-205ENST00000429436 CDCA7LQ96GN5 454 aa19.54■□□□□ 0.72
MARK3-205ENST00000429436 TROQ12816 1431 aaPredicted RBP19.54■□□□□ 0.72
MARK3-205ENST00000429436 DNMT1P26358 1616 aaKnown RBP19.53■□□□□ 0.72
MARK3-205ENST00000429436 KIAA0586Q9BVV6 1533 aa19.53■□□□□ 0.72
MARK3-205ENST00000429436 KLHL34Q8N239 644 aa19.53■□□□□ 0.72
MARK3-205ENST00000429436 ROCK2O75116 1388 aaKnown RBP19.53■□□□□ 0.72
MARK3-205ENST00000429436 GPATCH8Q9UKJ3 1502 aaKnown RBP19.52■□□□□ 0.72
MARK3-205ENST00000429436 SLC4A3P48751 1232 aa19.52■□□□□ 0.71
MARK3-205ENST00000429436 MRC2Q9UBG0 1479 aa19.51■□□□□ 0.71
MARK3-205ENST00000429436 BCORL1Q5H9F3 1711 aa19.51■□□□□ 0.71
MARK3-205ENST00000429436 RCAN3Q9UKA8 241 aa19.49■□□□□ 0.71
MARK3-205ENST00000429436 KIAA0556O60303 1618 aa19.49■□□□□ 0.71
MARK3-205ENST00000429436 FGD1P98174 961 aa19.49■□□□□ 0.71
MARK3-205ENST00000429436 RAPGEF6Q8TEU7 1601 aa19.48■□□□□ 0.71
MARK3-205ENST00000429436 KIF15Q9NS87 1388 aa19.48■□□□□ 0.71
MARK3-205ENST00000429436 MYBBP1AQ9BQG0 1328 aaKnown RBP19.47■□□□□ 0.71
MARK3-205ENST00000429436 KIF14Q15058 1648 aa19.47■□□□□ 0.71
MARK3-205ENST00000429436 RRP1P56182 461 aaKnown RBP19.46■□□□□ 0.71
MARK3-205ENST00000429436 GRIN2AQ12879 1464 aa19.46■□□□□ 0.71
MARK3-205ENST00000429436 ARXQ96QS3 562 aa19.44■□□□□ 0.7
MARK3-205ENST00000429436 C9orf84Q5VXU9 1444 aa19.43■□□□□ 0.7
MARK3-205ENST00000429436 RALBP1Q15311 655 aa19.42■□□□□ 0.7
MARK3-205ENST00000429436 ERCC6Q03468 1493 aa19.42■□□□□ 0.7
MARK3-205ENST00000429436 PANK3Q9H999 370 aa19.41■□□□□ 0.7
MARK3-205ENST00000429436 IFT140Q96RY7 1462 aa19.41■□□□□ 0.7
MARK3-205ENST00000429436 NLRP13Q86W25 1043 aa19.4■□□□□ 0.7
MARK3-205ENST00000429436 CARMIL2Q6F5E8 1435 aa19.4■□□□□ 0.7
MARK3-205ENST00000429436 KTN1Q86UP2 1357 aaKnown RBP19.39■□□□□ 0.69
MARK3-205ENST00000429436 FRAT1Q92837 279 aaPredicted RBP19.38■□□□□ 0.69
MARK3-205ENST00000429436 AAMPQ13685 434 aa19.37■□□□□ 0.69
MARK3-205ENST00000429436 RNF123Q5XPI4 1314 aa19.37■□□□□ 0.69
MARK3-205ENST00000429436 GSE1Q14687 1217 aa19.37■□□□□ 0.69
MARK3-205ENST00000429436 MBD5Q9P267 1494 aa19.36■□□□□ 0.69
MARK3-205ENST00000429436 ARID4BQ4LE39 1312 aaPredicted RBP19.36■□□□□ 0.69
MARK3-205ENST00000429436 BRD4O60885 1362 aaPredicted RBP19.35■□□□□ 0.69
MARK3-205ENST00000429436 PDE4AP27815 886 aa19.35■□□□□ 0.69
MARK3-205ENST00000429436 KDM5CP41229 1560 aa19.35■□□□□ 0.69
MARK3-205ENST00000429436 CRBNQ96SW2 442 aa19.34■□□□□ 0.69
MARK3-205ENST00000429436 CCDC144AA2RUR9 1427 aa19.33■□□□□ 0.68
MARK3-205ENST00000429436 RSPH6AQ9H0K4 717 aa19.33■□□□□ 0.68
MARK3-205ENST00000429436 C20orf194Q5TEA3 1177 aa19.32■□□□□ 0.68
MARK3-205ENST00000429436 RALGAPBQ86X10 1494 aa19.32■□□□□ 0.68
MARK3-205ENST00000429436 PPM1GO15355 546 aaPredicted RBP19.3■□□□□ 0.68
MARK3-205ENST00000429436 ATP10BO94823 1461 aa19.3■□□□□ 0.68
MARK3-205ENST00000429436 MAGI1Q96QZ7 1491 aaPredicted RBP19.3■□□□□ 0.68
MARK3-205ENST00000429436 EIF4G3O43432 1585 aaKnown RBP19.29■□□□□ 0.68
MARK3-205ENST00000429436 ADAMTS8Q9UP79 889 aa19.29■□□□□ 0.68
MARK3-205ENST00000429436 NFKBIBQ15653 356 aa19.29■□□□□ 0.68
MARK3-205ENST00000429436 LRPPRCP42704 1394 aaKnown RBP19.29■□□□□ 0.68
MARK3-205ENST00000429436 DISP3Q9P2K9 1392 aa19.29■□□□□ 0.68
MARK3-205ENST00000429436 PER1O15534 1290 aaPredicted RBP19.28■□□□□ 0.68
MARK3-205ENST00000429436 CEP170Q5SW79 1584 aa19.27■□□□□ 0.68
MARK3-205ENST00000429436 WASHC2CQ9Y4E1 1318 aa19.27■□□□□ 0.68
MARK3-205ENST00000429436 ADGRL2O95490 1459 aa19.27■□□□□ 0.68
MARK3-205ENST00000429436 TMF1P82094 1093 aa19.27■□□□□ 0.67
MARK3-205ENST00000429436 CCDC146Q8IYE0 955 aa19.27■□□□□ 0.67
MARK3-205ENST00000429436 UHRF1BP1Q6BDS2 1440 aa19.26■□□□□ 0.67
MARK3-205ENST00000429436 TCERG1O14776 1098 aaKnown RBP19.26■□□□□ 0.67
MARK3-205ENST00000429436 WDR43Q15061 677 aaKnown RBP eCLIP19.26■□□□□ 0.67
MARK3-205ENST00000429436 PAXIP1Q6ZW49 1069 aaPredicted RBP19.26■□□□□ 0.67
MARK3-205ENST00000429436 ITSN2Q9NZM3 1697 aa19.25■□□□□ 0.67
MARK3-205ENST00000429436 USP35Q9P2H5 1018 aa19.25■□□□□ 0.67
MARK3-205ENST00000429436 POLR1AO95602 1720 aaPredicted RBP19.24■□□□□ 0.67
MARK3-205ENST00000429436 KNSTRNQ9Y448 316 aa19.24■□□□□ 0.67
MARK3-205ENST00000429436 PTPRGP23470 1445 aa19.24■□□□□ 0.67
MARK3-205ENST00000429436 HSP90AA2PQ14568 343 aaPredicted RBP19.24■□□□□ 0.67
MARK3-205ENST00000429436 ADGBQ8N7X0 1667 aa19.23■□□□□ 0.67
MARK3-205ENST00000429436 RGS3P49796 1198 aa19.23■□□□□ 0.67
MARK3-205ENST00000429436 SYNJ2O15056 1496 aa19.23■□□□□ 0.67
MARK3-205ENST00000429436 TESK2Q96S53 571 aa19.23■□□□□ 0.67
MARK3-205ENST00000429436 BACH2Q9BYV9 841 aa19.22■□□□□ 0.67
MARK3-205ENST00000429436 PDE3BQ13370 1112 aa19.21■□□□□ 0.67
MARK3-205ENST00000429436 SENP3Q9H4L4 574 aaPredicted RBP19.2■□□□□ 0.66
MARK3-205ENST00000429436 PARD3Q8TEW0 1356 aa19.2■□□□□ 0.66
MARK3-205ENST00000429436 PRAG1Q86YV5 1406 aa19.19■□□□□ 0.66
MARK3-205ENST00000429436 FRAT2O75474 233 aaPredicted RBP19.19■□□□□ 0.66
MARK3-205ENST00000429436 FAM135AQ9P2D6 1515 aa19.17■□□□□ 0.66
MARK3-205ENST00000429436 ABCC10Q5T3U5 1492 aa19.17■□□□□ 0.66
MARK3-205ENST00000429436 CDC42BPAQ5VT25 1732 aa19.16■□□□□ 0.66
MARK3-205ENST00000429436 TNNT2P45379 298 aaPredicted RBP19.16■□□□□ 0.66
MARK3-205ENST00000429436 PLEKHH2Q8IVE3 1493 aa19.16■□□□□ 0.66
MARK3-205ENST00000429436 NEUROD2Q15784 382 aa19.15■□□□□ 0.66
MARK3-205ENST00000429436 NAP1L5Q96NT1 182 aaPredicted RBP19.15■□□□□ 0.66
MARK3-205ENST00000429436 ERBINQ96RT1 1412 aa19.14■□□□□ 0.65
MARK3-205ENST00000429436 PPP2R1AP30153 589 aa19.13■□□□□ 0.65
MARK3-205ENST00000429436 ARHGEF12Q9NZN5 1544 aa19.13■□□□□ 0.65
MARK3-205ENST00000429436 CCDC141Q6ZP82 1450 aa19.13■□□□□ 0.65
MARK3-205ENST00000429436 CROCC2H7BZ55 1655 aa19.13■□□□□ 0.65
MARK3-205ENST00000429436 ARHGAP5Q13017 1502 aa19.12■□□□□ 0.65
MARK3-205ENST00000429436 A2MP01023 1474 aa19.12■□□□□ 0.65
MARK3-205ENST00000429436 AFAP1Q8N556 730 aa19.11■□□□□ 0.65
MARK3-205ENST00000429436 PLA2R1Q13018 1463 aa19.11■□□□□ 0.65
MARK3-205ENST00000429436 APAF1O14727 1248 aa19.1■□□□□ 0.65
MARK3-205ENST00000429436 TAF7LQ5H9L4 462 aa19.1■□□□□ 0.65
MARK3-205ENST00000429436 CHGAP10645 457 aaKnown RBP19.1■□□□□ 0.65
MARK3-205ENST00000429436 SYCP2Q9BX26 1530 aa19.1■□□□□ 0.65
MARK3-205ENST00000429436 GOLGA2Q08379 1002 aa19.09■□□□□ 0.65
MARK3-205ENST00000429436 RSPH4AQ5TD94 716 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms