RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 CHMP3Q9Y3E7 222 aa21.91■■□□□ 1.1
SMARCA4-203ENST00000429416 KCNJ4P48050 445 aa21.91■■□□□ 1.1
SMARCA4-203ENST00000429416 C1orf141Q5JVX7 400 aa21.89■■□□□ 1.09
SMARCA4-203ENST00000429416 ANP32BQ92688 251 aaKnown RBP21.89■■□□□ 1.09
SMARCA4-203ENST00000429416 TOP2BQ02880 1626 aa21.89■■□□□ 1.09
SMARCA4-203ENST00000429416 DHX57Q6P158 1386 aaKnown RBP21.88■■□□□ 1.09
SMARCA4-203ENST00000429416 FGD1P98174 961 aa21.88■■□□□ 1.09
SMARCA4-203ENST00000429416 KIAA0586Q9BVV6 1533 aa21.88■■□□□ 1.09
SMARCA4-203ENST00000429416 POGZQ7Z3K3 1410 aa21.88■■□□□ 1.09
SMARCA4-203ENST00000429416 LRRC9Q6ZRR7 1453 aa21.87■■□□□ 1.09
SMARCA4-203ENST00000429416 KIF21BO75037 1637 aa21.87■■□□□ 1.09
SMARCA4-203ENST00000429416 CGNL1Q0VF96 1302 aa21.87■■□□□ 1.09
SMARCA4-203ENST00000429416 ISY1Q9ULR0 285 aaKnown RBP21.87■■□□□ 1.09
SMARCA4-203ENST00000429416 FYCO1Q9BQS8 1478 aa21.87■■□□□ 1.09
SMARCA4-203ENST00000429416 TULP1O00294 542 aaPredicted RBP21.86■■□□□ 1.09
SMARCA4-203ENST00000429416 CHMP4AQ9BY43 222 aa21.86■■□□□ 1.09
SMARCA4-203ENST00000429416 ESCO1Q5FWF5 840 aa21.86■■□□□ 1.09
SMARCA4-203ENST00000429416 NAP1L2Q9ULW6 460 aaPredicted RBP21.85■■□□□ 1.09
SMARCA4-203ENST00000429416 IPO8O15397 1037 aaKnown RBP21.85■■□□□ 1.09
SMARCA4-203ENST00000429416 PIP4K2BP78356 416 aa21.85■■□□□ 1.09
SMARCA4-203ENST00000429416 TAF7LQ5H9L4 462 aa21.85■■□□□ 1.09
SMARCA4-203ENST00000429416 ANKLE2Q86XL3 938 aa21.84■■□□□ 1.09
SMARCA4-203ENST00000429416 CENPJQ9HC77 1338 aaPredicted RBP21.84■■□□□ 1.09
SMARCA4-203ENST00000429416 G3V3G9 751 aa21.84■■□□□ 1.09
SMARCA4-203ENST00000429416 DCAF8Q5TAQ9 597 aa21.84■■□□□ 1.09
SMARCA4-203ENST00000429416 SLC26A8Q96RN1 970 aa21.83■■□□□ 1.09
SMARCA4-203ENST00000429416 CD109Q6YHK3 1445 aa21.82■■□□□ 1.08
SMARCA4-203ENST00000429416 TROQ12816 1431 aaPredicted RBP21.82■■□□□ 1.08
SMARCA4-203ENST00000429416 ZNF608Q9ULD9 1512 aaPredicted RBP21.82■■□□□ 1.08
SMARCA4-203ENST00000429416 USP35Q9P2H5 1018 aa21.82■■□□□ 1.08
SMARCA4-203ENST00000429416 ARAP1Q96P48 1450 aa21.81■■□□□ 1.08
SMARCA4-203ENST00000429416 LMOD3Q0VAK6 560 aa21.81■■□□□ 1.08
SMARCA4-203ENST00000429416 SLC4A10Q6U841 1118 aa21.81■■□□□ 1.08
SMARCA4-203ENST00000429416 TEFQ10587 303 aa21.81■■□□□ 1.08
SMARCA4-203ENST00000429416 ABCA10Q8WWZ4 1543 aa21.8■■□□□ 1.08
SMARCA4-203ENST00000429416 RRP7AQ9Y3A4 280 aaKnown RBP21.8■■□□□ 1.08
SMARCA4-203ENST00000429416 ERICH3Q5RHP9 1530 aa21.8■■□□□ 1.08
SMARCA4-203ENST00000429416 CABP2Q9NPB3 220 aa21.79■■□□□ 1.08
SMARCA4-203ENST00000429416 NUTM2BA6NNL0 878 aaPredicted RBP21.79■■□□□ 1.08
SMARCA4-203ENST00000429416 NUTM2EB1AL46 878 aaPredicted RBP21.79■■□□□ 1.08
SMARCA4-203ENST00000429416 NUTM2AQ8IVF1 878 aaPredicted RBP21.79■■□□□ 1.08
SMARCA4-203ENST00000429416 NLRP13Q86W25 1043 aa21.79■■□□□ 1.08
SMARCA4-203ENST00000429416 TPRNQ4KMQ1 711 aa21.78■■□□□ 1.08
SMARCA4-203ENST00000429416 NLRP6P59044 892 aa21.78■■□□□ 1.08
SMARCA4-203ENST00000429416 NLRP2Q9NX02 1062 aa21.78■■□□□ 1.08
SMARCA4-203ENST00000429416 USP47Q96K76 1375 aa21.78■■□□□ 1.08
SMARCA4-203ENST00000429416 CFAP70Q5T0N1 1121 aa21.78■■□□□ 1.08
SMARCA4-203ENST00000429416 GORABQ5T7V8 394 aa21.77■■□□□ 1.08
SMARCA4-203ENST00000429416 ITPRIPQ8IWB1 547 aa21.77■■□□□ 1.08
SMARCA4-203ENST00000429416 URB2Q14146 1524 aaKnown RBP21.77■■□□□ 1.08
SMARCA4-203ENST00000429416 MAGI1Q96QZ7 1491 aaPredicted RBP21.76■■□□□ 1.07
SMARCA4-203ENST00000429416 TTC5Q8N0Z6 440 aa21.76■■□□□ 1.07
SMARCA4-203ENST00000429416 PMFBP1Q8TBY8 1022 aa21.76■■□□□ 1.07
SMARCA4-203ENST00000429416 GRIN2AQ12879 1464 aa21.76■■□□□ 1.07
SMARCA4-203ENST00000429416 PLEKHH2Q8IVE3 1493 aa21.76■■□□□ 1.07
SMARCA4-203ENST00000429416 NGEFQ8N5V2 710 aa21.76■■□□□ 1.07
SMARCA4-203ENST00000429416 PRXQ9BXM0 1461 aa21.76■■□□□ 1.07
SMARCA4-203ENST00000429416 SMC4Q9NTJ3 1288 aa21.75■■□□□ 1.07
SMARCA4-203ENST00000429416 ELL2O00472 640 aaPredicted RBP21.75■■□□□ 1.07
SMARCA4-203ENST00000429416 KLHL34Q8N239 644 aa21.75■■□□□ 1.07
SMARCA4-203ENST00000429416 CCER2I3L3R5 266 aa21.75■■□□□ 1.07
SMARCA4-203ENST00000429416 C9orf84Q5VXU9 1444 aa21.75■■□□□ 1.07
SMARCA4-203ENST00000429416 EFCAB5A4FU69 1503 aa21.74■■□□□ 1.07
SMARCA4-203ENST00000429416 BECN1Q14457 450 aa21.73■■□□□ 1.07
SMARCA4-203ENST00000429416 RAPGEF4Q8WZA2 1011 aa21.73■■□□□ 1.07
SMARCA4-203ENST00000429416 GPRASP1Q5JY77 1395 aa21.73■■□□□ 1.07
SMARCA4-203ENST00000429416 ABTB2Q8N961 1025 aa21.72■■□□□ 1.07
SMARCA4-203ENST00000429416 SLC52A1Q9NWF4 448 aa21.72■■□□□ 1.07
SMARCA4-203ENST00000429416 STAC3Q96MF2 364 aa21.71■■□□□ 1.07
SMARCA4-203ENST00000429416 PRAM1Q96QH2 718 aa21.7■■□□□ 1.06
SMARCA4-203ENST00000429416 PLB1Q6P1J6 1458 aa21.7■■□□□ 1.06
SMARCA4-203ENST00000429416 FRAT2O75474 233 aaPredicted RBP21.7■■□□□ 1.06
SMARCA4-203ENST00000429416 NCLP19338 710 aaKnown RBP21.7■■□□□ 1.06
SMARCA4-203ENST00000429416 IQGAP2Q13576 1575 aa21.7■■□□□ 1.06
SMARCA4-203ENST00000429416 EIF5BO60841 1220 aaKnown RBP21.69■■□□□ 1.06
SMARCA4-203ENST00000429416 GGNBP2Q9H3C7 697 aa21.69■■□□□ 1.06
SMARCA4-203ENST00000429416 STRN4Q9NRL3 753 aa21.69■■□□□ 1.06
SMARCA4-203ENST00000429416 CDK11BP21127 795 aaKnown RBP21.69■■□□□ 1.06
SMARCA4-203ENST00000429416 CEBPAP49715 358 aaPredicted RBP21.69■■□□□ 1.06
SMARCA4-203ENST00000429416 CLUAP1Q96AJ1 413 aa21.69■■□□□ 1.06
SMARCA4-203ENST00000429416 CDK13Q14004 1512 aaKnown RBP21.68■■□□□ 1.06
SMARCA4-203ENST00000429416 DIAPH1O60610 1272 aaKnown RBP21.67■■□□□ 1.06
SMARCA4-203ENST00000429416 B4GALNT3Q6L9W6 998 aa21.67■■□□□ 1.06
SMARCA4-203ENST00000429416 EIF2S2P20042 333 aaKnown RBP21.67■■□□□ 1.06
SMARCA4-203ENST00000429416 HECW1Q76N89 1606 aa21.66■■□□□ 1.06
SMARCA4-203ENST00000429416 HDAC5Q9UQL6 1122 aa21.65■■□□□ 1.06
SMARCA4-203ENST00000429416 ARHGEF11O15085 1522 aa21.65■■□□□ 1.06
SMARCA4-203ENST00000429416 RCAN3Q9UKA8 241 aa21.63■■□□□ 1.05
SMARCA4-203ENST00000429416 RRBP1Q9P2E9 1410 aaKnown RBP21.62■■□□□ 1.05
SMARCA4-203ENST00000429416 NECTIN2Q92692 538 aa21.62■■□□□ 1.05
SMARCA4-203ENST00000429416 ZRSR1Q15695 479 aaKnown RBP21.62■■□□□ 1.05
SMARCA4-203ENST00000429416 PPP4R2Q9NY27 417 aa21.62■■□□□ 1.05
SMARCA4-203ENST00000429416 EHBP1L1Q8N3D4 1523 aa21.61■■□□□ 1.05
SMARCA4-203ENST00000429416 MYBBP1AQ9BQG0 1328 aaKnown RBP21.61■■□□□ 1.05
SMARCA4-203ENST00000429416 NBR1Q14596 966 aa21.6■■□□□ 1.05
SMARCA4-203ENST00000429416 MIA2Q96PC5 1412 aa21.6■■□□□ 1.05
SMARCA4-203ENST00000429416 HMOX1P09601 288 aa21.6■■□□□ 1.05
SMARCA4-203ENST00000429416 EPRSP07814 1512 aaKnown RBP21.59■■□□□ 1.05
SMARCA4-203ENST00000429416 XPCQ01831 940 aaPredicted RBP21.59■■□□□ 1.05
SMARCA4-203ENST00000429416 ADGRL1O94910 1474 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms