RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 TSPY4P0CV99 314 aa24.57■■□□□ 1.52
SEC13-210ENST00000428626 TSPY10P0CW01 314 aa24.57■■□□□ 1.52
SEC13-210ENST00000428626 MAST1Q9Y2H9 1570 aa24.57■■□□□ 1.52
SEC13-210ENST00000428626 KDM5DQ9BY66 1539 aa24.56■■□□□ 1.52
SEC13-210ENST00000428626 MIA2Q96PC5 1412 aa24.55■■□□□ 1.52
SEC13-210ENST00000428626 PLA2R1Q13018 1463 aa24.54■■□□□ 1.52
SEC13-210ENST00000428626 TCOF1Q13428 1488 aaKnown RBP24.54■■□□□ 1.52
SEC13-210ENST00000428626 PZPP20742 1482 aa24.53■■□□□ 1.52
SEC13-210ENST00000428626 DNMT1P26358 1616 aaKnown RBP24.53■■□□□ 1.52
SEC13-210ENST00000428626 A2ML1A8K2U0 1454 aa24.52■■□□□ 1.52
SEC13-210ENST00000428626 FAM135AQ9P2D6 1515 aa24.52■■□□□ 1.52
SEC13-210ENST00000428626 WASHC2CQ9Y4E1 1318 aa24.51■■□□□ 1.51
SEC13-210ENST00000428626 TNRQ92752 1358 aa24.5■■□□□ 1.51
SEC13-210ENST00000428626 RNF17Q9BXT8 1623 aaKnown RBP24.5■■□□□ 1.51
SEC13-210ENST00000428626 MROH1Q8NDA8 1641 aa24.47■■□□□ 1.51
SEC13-210ENST00000428626 ZNF335Q9H4Z2 1342 aaPredicted RBP24.47■■□□□ 1.51
SEC13-210ENST00000428626 PKD2Q13563 968 aa24.47■■□□□ 1.51
SEC13-210ENST00000428626 ABCC3O15438 1527 aa24.45■■□□□ 1.51
SEC13-210ENST00000428626 EIF2AK4Q9P2K8 1649 aaKnown RBP24.44■■□□□ 1.5
SEC13-210ENST00000428626 ABCC5O15440 1437 aa24.44■■□□□ 1.5
SEC13-210ENST00000428626 PTPN23Q9H3S7 1636 aa24.43■■□□□ 1.5
SEC13-210ENST00000428626 NEURL4Q96JN8 1562 aa24.42■■□□□ 1.5
SEC13-210ENST00000428626 CROCC2H7BZ55 1655 aa24.41■■□□□ 1.5
SEC13-210ENST00000428626 DUOX2Q9NRD8 1548 aa24.4■■□□□ 1.5
SEC13-210ENST00000428626 IQSEC2Q5JU85 1478 aa24.39■■□□□ 1.5
SEC13-210ENST00000428626 ZC3H13Q5T200 1668 aaKnown RBP24.39■■□□□ 1.49
SEC13-210ENST00000428626 CEP152O94986 1710 aa24.38■■□□□ 1.49
SEC13-210ENST00000428626 FGD6Q6ZV73 1430 aa24.38■■□□□ 1.49
SEC13-210ENST00000428626 APLP2Q06481 763 aa24.38■■□□□ 1.49
SEC13-210ENST00000428626 POLR1AO95602 1720 aaPredicted RBP24.38■■□□□ 1.49
SEC13-210ENST00000428626 SHANK2Q9UPX8 1470 aa24.38■■□□□ 1.49
SEC13-210ENST00000428626 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.37■■□□□ 1.491e-6■■■■□ 25.4
SEC13-210ENST00000428626 KIF15Q9NS87 1388 aa24.37■■□□□ 1.49
SEC13-210ENST00000428626 NLRP1Q9C000 1473 aa24.37■■□□□ 1.49
SEC13-210ENST00000428626 SPATA31D1Q6ZQQ2 1576 aa24.37■■□□□ 1.49
SEC13-210ENST00000428626 DAPK1P53355 1430 aa24.36■■□□□ 1.49
SEC13-210ENST00000428626 RRP7BPQ9NSQ0 103 aa24.35■■□□□ 1.49
SEC13-210ENST00000428626 UGGT1Q9NYU2 1555 aa24.34■■□□□ 1.49
SEC13-210ENST00000428626 ERVK-7P63135 1459 aa24.34■■□□□ 1.49
SEC13-210ENST00000428626 CFAP65Q6ZU64 1925 aaKnown RBP24.33■■□□□ 1.49
SEC13-210ENST00000428626 PRDM15P57071 1507 aaPredicted RBP24.31■■□□□ 1.48
SEC13-210ENST00000428626 ERBINQ96RT1 1412 aa24.3■■□□□ 1.48
SEC13-210ENST00000428626 THEMISQ8N1K5 641 aaPredicted RBP24.3■■□□□ 1.48
SEC13-210ENST00000428626 ANKLE2Q86XL3 938 aa24.28■■□□□ 1.48
SEC13-210ENST00000428626 CHIC2Q9UKJ5 165 aa24.28■■□□□ 1.48
SEC13-210ENST00000428626 DEPDC5O75140 1603 aa24.27■■□□□ 1.48
SEC13-210ENST00000428626 MED14O60244 1454 aa24.26■■□□□ 1.47
SEC13-210ENST00000428626 VWDEQ8N2E2 1590 aa24.25■■□□□ 1.47
SEC13-210ENST00000428626 NPHP4O75161 1426 aaPredicted RBP24.24■■□□□ 1.47
SEC13-210ENST00000428626 ARHGAP31Q2M1Z3 1444 aa24.24■■□□□ 1.47
SEC13-210ENST00000428626 UBAP1LF5GYI3 381 aa24.23■■□□□ 1.47
SEC13-210ENST00000428626 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.23■■□□□ 1.47
SEC13-210ENST00000428626 UBR1Q8IWV7 1749 aa24.23■■□□□ 1.47
SEC13-210ENST00000428626 ANKRD30AQ9BXX3 1397 aa24.21■■□□□ 1.47
SEC13-210ENST00000428626 IQGAP1P46940 1657 aa24.2■■□□□ 1.46
SEC13-210ENST00000428626 CPS1P31327 1500 aa24.19■■□□□ 1.46
SEC13-210ENST00000428626 ADGRL2O95490 1459 aa24.19■■□□□ 1.46
SEC13-210ENST00000428626 STRCP1A6NGW2 1772 aa24.16■■□□□ 1.46
SEC13-210ENST00000428626 FAM50AQ14320 339 aaKnown RBP24.16■■□□□ 1.46
SEC13-210ENST00000428626 LMTK2Q8IWU2 1503 aa24.15■■□□□ 1.46
SEC13-210ENST00000428626 DISP3Q9P2K9 1392 aa24.15■■□□□ 1.46
SEC13-210ENST00000428626 ARHGAP23Q9P227 1491 aa24.14■■□□□ 1.46
SEC13-210ENST00000428626 LTKP29376 864 aa24.14■■□□□ 1.45
SEC13-210ENST00000428626 PIK3C2BO00750 1634 aa24.13■■□□□ 1.45
SEC13-210ENST00000428626 KANK1Q14678 1352 aa24.13■■□□□ 1.45
SEC13-210ENST00000428626 SLIT1O75093 1534 aa24.12■■□□□ 1.45
SEC13-210ENST00000428626 SCAF11Q99590 1463 aaKnown RBP24.12■■□□□ 1.45
SEC13-210ENST00000428626 ILDR2Q71H61 639 aa24.11■■□□□ 1.45
SEC13-210ENST00000428626 SYNMO15061 1565 aa24.11■■□□□ 1.45
SEC13-210ENST00000428626 ALKQ9UM73 1620 aa24.1■■□□□ 1.45
SEC13-210ENST00000428626 EFCAB6Q5THR3 1501 aa24.09■■□□□ 1.45
SEC13-210ENST00000428626 IDI1Q13907 227 aa24.08■■□□□ 1.45
SEC13-210ENST00000428626 TXNDC2Q86VQ3 553 aa24.07■■□□□ 1.44
SEC13-210ENST00000428626 NOS1P29475 1434 aa24.07■■□□□ 1.44
SEC13-210ENST00000428626 ANKRD50Q9ULJ7 1429 aa24.07■■□□□ 1.44
SEC13-210ENST00000428626 LRRC7Q96NW7 1537 aa24.06■■□□□ 1.44
SEC13-210ENST00000428626 PIP4K2BP78356 416 aa24.05■■□□□ 1.44
SEC13-210ENST00000428626 TMEM2Q9UHN6 1383 aa24.04■■□□□ 1.44
SEC13-210ENST00000428626 TOM1O60784 492 aa24.02■■□□□ 1.44
SEC13-210ENST00000428626 HSPA1LP34931 641 aa24.02■■□□□ 1.44
SEC13-210ENST00000428626 SCAF1Q9H7N4 1312 aaKnown RBP24.02■■□□□ 1.44
SEC13-210ENST00000428626 KDM5AP29375 1690 aaKnown RBP24.02■■□□□ 1.44
SEC13-210ENST00000428626 PPARGC1BQ86YN6 1023 aaKnown RBP23.99■■□□□ 1.43
SEC13-210ENST00000428626 STAG3Q9UJ98 1225 aa23.98■■□□□ 1.43
SEC13-210ENST00000428626 EID1Q9Y6B2 187 aa23.98■■□□□ 1.43
SEC13-210ENST00000428626 UNC13BO14795 1591 aa23.97■■□□□ 1.43
SEC13-210ENST00000428626 ADGRB3O60242 1522 aa23.97■■□□□ 1.43
SEC13-210ENST00000428626 XIRP1Q702N8 1843 aaKnown RBP23.96■■□□□ 1.43
SEC13-210ENST00000428626 TET3O43151 1660 aa23.96■■□□□ 1.43
SEC13-210ENST00000428626 RPRD2Q5VT52 1461 aaKnown RBP23.94■■□□□ 1.42
SEC13-210ENST00000428626 ROCK1Q13464 1354 aa23.93■■□□□ 1.42
SEC13-210ENST00000428626 MYO5BQ9ULV0 1848 aa23.92■■□□□ 1.42
SEC13-210ENST00000428626 SLC52A1Q9NWF4 448 aa23.92■■□□□ 1.42
SEC13-210ENST00000428626 GCC2Q8IWJ2 1684 aa23.91■■□□□ 1.42
SEC13-210ENST00000428626 SLC26A8Q96RN1 970 aa23.9■■□□□ 1.42
SEC13-210ENST00000428626 E9PCH4 1651 aa23.89■■□□□ 1.42
SEC13-210ENST00000428626 ITGAEP38570 1179 aa23.89■■□□□ 1.41
SEC13-210ENST00000428626 ZFYVE9O95405 1425 aa23.88■■□□□ 1.41
SEC13-210ENST00000428626 TMEM131LA2VDJ0 1609 aa23.87■■□□□ 1.41
SEC13-210ENST00000428626 IQGAP3Q86VI3 1631 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms