RNA–Protein interactions for RNA: ENST00000428425.1

NCBP2-205, Transcript of nuclear cap binding protein subunit 2, humanhuman

TSL 1 (best)

Gene NCBP2, Length 2,220 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2-205ENST00000428425 FANCAO15360 1455 aa19.39■□□□□ 0.69
NCBP2-205ENST00000428425 MAGI2Q86UL8 1455 aa19.39■□□□□ 0.69
NCBP2-205ENST00000428425 KDM2AQ9Y2K7 1162 aa19.39■□□□□ 0.69
NCBP2-205ENST00000428425 UHRF1BP1Q6BDS2 1440 aa19.39■□□□□ 0.69
NCBP2-205ENST00000428425 KIF7Q2M1P5 1343 aa19.38■□□□□ 0.69
NCBP2-205ENST00000428425 CNTLNQ9NXG0 1405 aa19.38■□□□□ 0.69
NCBP2-205ENST00000428425 SPAG9O60271 1321 aaKnown RBP19.38■□□□□ 0.69
NCBP2-205ENST00000428425 USP47Q96K76 1375 aa19.37■□□□□ 0.69
NCBP2-205ENST00000428425 DCAF11Q8TEB1 546 aa19.37■□□□□ 0.69
NCBP2-205ENST00000428425 BCORL1Q5H9F3 1711 aa19.36■□□□□ 0.69
NCBP2-205ENST00000428425 KDM5CP41229 1560 aa19.36■□□□□ 0.69
NCBP2-205ENST00000428425 RALGAPBQ86X10 1494 aa19.36■□□□□ 0.69
NCBP2-205ENST00000428425 CCDC144AA2RUR9 1427 aa19.36■□□□□ 0.69
NCBP2-205ENST00000428425 POLR1AO95602 1720 aaPredicted RBP19.35■□□□□ 0.69
NCBP2-205ENST00000428425 ADGRL1O94910 1474 aa19.32■□□□□ 0.68
NCBP2-205ENST00000428425 RTEL1-TNFRSF6BF6WH68 1400 aa19.32■□□□□ 0.68
NCBP2-205ENST00000428425 RGL3Q3MIN7 710 aa19.32■□□□□ 0.68
NCBP2-205ENST00000428425 INO80Q9ULG1 1556 aaPredicted RBP19.32■□□□□ 0.68
NCBP2-205ENST00000428425 SCAPERQ9BY12 1400 aa19.31■□□□□ 0.68
NCBP2-205ENST00000428425 ATP7AQ04656 1500 aa19.31■□□□□ 0.68
NCBP2-205ENST00000428425 FAM69CQ0P6D2 419 aa19.3■□□□□ 0.68
NCBP2-205ENST00000428425 A2MP01023 1474 aa19.29■□□□□ 0.68
NCBP2-205ENST00000428425 CARD11Q9BXL7 1154 aa19.29■□□□□ 0.68
NCBP2-205ENST00000428425 E9PCH4 1651 aa19.27■□□□□ 0.67
NCBP2-205ENST00000428425 CCDC184Q52MB2 194 aa19.27■□□□□ 0.67
NCBP2-205ENST00000428425 PRAG1Q86YV5 1406 aa19.26■□□□□ 0.67
NCBP2-205ENST00000428425 ATP10AO60312 1499 aa19.25■□□□□ 0.67
NCBP2-205ENST00000428425 POLR3GLQ9BT43 218 aa19.25■□□□□ 0.67
NCBP2-205ENST00000428425 DEPDC5O75140 1603 aa19.25■□□□□ 0.67
NCBP2-205ENST00000428425 TRPM1Q7Z4N2 1603 aa19.24■□□□□ 0.67
NCBP2-205ENST00000428425 MYT1LQ9UL68 1186 aa19.24■□□□□ 0.67
NCBP2-205ENST00000428425 PRKRIP1Q9H875 184 aaPredicted RBP19.23■□□□□ 0.67
NCBP2-205ENST00000428425 ROCK2O75116 1388 aaKnown RBP19.23■□□□□ 0.67
NCBP2-205ENST00000428425 ST20-MTHFSA0A0A6YYL1 179 aa19.23■□□□□ 0.67
NCBP2-205ENST00000428425 NBPF1Q3BBV0 1214 aa19.23■□□□□ 0.67
NCBP2-205ENST00000428425 DIP2BQ9P265 1576 aa19.22■□□□□ 0.67
NCBP2-205ENST00000428425 KIF13AQ9H1H9 1805 aa19.21■□□□□ 0.67
NCBP2-205ENST00000428425 KIDINS220Q9ULH0 1771 aa19.21■□□□□ 0.67
NCBP2-205ENST00000428425 KIF3BO15066 747 aa19.2■□□□□ 0.66
NCBP2-205ENST00000428425 CD109Q6YHK3 1445 aa19.2■□□□□ 0.66
NCBP2-205ENST00000428425 GLI2P10070 1586 aa19.2■□□□□ 0.66
NCBP2-205ENST00000428425 MROH1Q8NDA8 1641 aa19.19■□□□□ 0.66
NCBP2-205ENST00000428425 DHX29Q7Z478 1369 aaKnown RBP19.19■□□□□ 0.66
NCBP2-205ENST00000428425 VWDEQ8N2E2 1590 aa19.18■□□□□ 0.66
NCBP2-205ENST00000428425 CNGB1Q14028 1251 aaPredicted RBP19.17■□□□□ 0.66
NCBP2-205ENST00000428425 TRPM2O94759 1503 aa19.16■□□□□ 0.66
NCBP2-205ENST00000428425 TET3O43151 1660 aa19.16■□□□□ 0.66
NCBP2-205ENST00000428425 SPHKAPQ2M3C7 1700 aa19.16■□□□□ 0.66
NCBP2-205ENST00000428425 SUPT16HQ9Y5B9 1047 aaKnown RBP19.16■□□□□ 0.66
NCBP2-205ENST00000428425 ZNF518AQ6AHZ1 1483 aa19.15■□□□□ 0.66
NCBP2-205ENST00000428425 PRDM15P57071 1507 aaPredicted RBP19.15■□□□□ 0.66
NCBP2-205ENST00000428425 CLTCL1P53675 1640 aa19.15■□□□□ 0.66
NCBP2-205ENST00000428425 PTPRTO14522 1441 aa19.14■□□□□ 0.66
NCBP2-205ENST00000428425 EIF2AK4Q9P2K8 1649 aaKnown RBP19.14■□□□□ 0.66
NCBP2-205ENST00000428425 POGZQ7Z3K3 1410 aa19.13■□□□□ 0.65
NCBP2-205ENST00000428425 GPRASP1Q5JY77 1395 aa19.13■□□□□ 0.65
NCBP2-205ENST00000428425 ARID4BQ4LE39 1312 aaPredicted RBP19.12■□□□□ 0.65
NCBP2-205ENST00000428425 HNRNPUQ00839 825 aaKnown RBP eCLIP19.12■□□□□ 0.65
NCBP2-205ENST00000428425 KANK1Q14678 1352 aa19.11■□□□□ 0.65
NCBP2-205ENST00000428425 CEP152O94986 1710 aa19.11■□□□□ 0.65
NCBP2-205ENST00000428425 UGGT1Q9NYU2 1555 aa19.11■□□□□ 0.65
NCBP2-205ENST00000428425 MRS2Q9HD23 443 aa19.1■□□□□ 0.65
NCBP2-205ENST00000428425 FRMPD1Q5SYB0 1578 aa19.1■□□□□ 0.65
NCBP2-205ENST00000428425 CFAP74Q9C0B2 1584 aa19.1■□□□□ 0.65
NCBP2-205ENST00000428425 MADDQ8WXG6 1647 aa19.09■□□□□ 0.65
NCBP2-205ENST00000428425 LAMC1P11047 1609 aa19.08■□□□□ 0.65
NCBP2-205ENST00000428425 RNF17Q9BXT8 1623 aaKnown RBP19.07■□□□□ 0.64
NCBP2-205ENST00000428425 FAM9BQ8IZU0 186 aa19.07■□□□□ 0.64
NCBP2-205ENST00000428425 PPRC1Q5VV67 1664 aaKnown RBP19.07■□□□□ 0.64
NCBP2-205ENST00000428425 RAPGEF3O95398 923 aa19.06■□□□□ 0.64
NCBP2-205ENST00000428425 EFCAB6Q5THR3 1501 aa19.06■□□□□ 0.64
NCBP2-205ENST00000428425 HECW2Q9P2P5 1572 aa19.06■□□□□ 0.64
NCBP2-205ENST00000428425 ABCA6Q8N139 1617 aa19.06■□□□□ 0.64
NCBP2-205ENST00000428425 MLH3Q9UHC1 1453 aa19.06■□□□□ 0.64
NCBP2-205ENST00000428425 TESK2Q96S53 571 aa19.05■□□□□ 0.64
NCBP2-205ENST00000428425 DISP3Q9P2K9 1392 aa19.04■□□□□ 0.64
NCBP2-205ENST00000428425 COL17A1Q9UMD9 1497 aaPredicted RBP19.02■□□□□ 0.64
NCBP2-205ENST00000428425 MAP3K4Q9Y6R4 1608 aa19.01■□□□□ 0.63
NCBP2-205ENST00000428425 NEO1Q92859 1461 aa19.01■□□□□ 0.63
NCBP2-205ENST00000428425 LMTK2Q8IWU2 1503 aa19■□□□□ 0.63
NCBP2-205ENST00000428425 GGT6Q6P531 493 aa19■□□□□ 0.63
NCBP2-205ENST00000428425 MROH2AA6NES4 1674 aa18.99■□□□□ 0.63
NCBP2-205ENST00000428425 FKBP8Q14318 412 aa18.98■□□□□ 0.63
NCBP2-205ENST00000428425 IQGAP1P46940 1657 aa18.97■□□□□ 0.63
NCBP2-205ENST00000428425 CFAP65Q6ZU64 1925 aaKnown RBP18.97■□□□□ 0.63
NCBP2-205ENST00000428425 BCANQ96GW7 911 aa18.97■□□□□ 0.63
NCBP2-205ENST00000428425 NPATQ14207 1427 aa18.97■□□□□ 0.63
NCBP2-205ENST00000428425 DIP2CQ9Y2E4 1556 aa18.96■□□□□ 0.63
NCBP2-205ENST00000428425 RICTORQ6R327 1708 aa18.96■□□□□ 0.63
NCBP2-205ENST00000428425 KIF1BO60333 1816 aa18.94■□□□□ 0.62
NCBP2-205ENST00000428425 TSPOAP1O95153 1857 aa18.94■□□□□ 0.62
NCBP2-205ENST00000428425 ADGRF5Q8IZF2 1346 aa18.94■□□□□ 0.62
NCBP2-205ENST00000428425 NEURL4Q96JN8 1562 aa18.93■□□□□ 0.62
NCBP2-205ENST00000428425 YEATS2Q9ULM3 1422 aa18.93■□□□□ 0.62
NCBP2-205ENST00000428425 ABCC3O15438 1527 aa18.93■□□□□ 0.62
NCBP2-205ENST00000428425 PER1O15534 1290 aaPredicted RBP18.92■□□□□ 0.62
NCBP2-205ENST00000428425 IFT172Q9UG01 1749 aa18.92■□□□□ 0.62
NCBP2-205ENST00000428425 SENP3-EIF4A1A0A087X0R7 540 aa18.9■□□□□ 0.62
NCBP2-205ENST00000428425 TMF1P82094 1093 aa18.9■□□□□ 0.62
NCBP2-205ENST00000428425 CFAP70Q5T0N1 1121 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms