RNA–Protein interactions for RNA: ENST00000428361.5

CTDSP1-202, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-202ENST00000428361 ZNF142P52746 1687 aaPredicted RBP24.24■■□□□ 1.47
CTDSP1-202ENST00000428361 MYO3AQ8NEV4 1616 aa24.23■■□□□ 1.47
CTDSP1-202ENST00000428361 CAMSAP1Q5T5Y3 1602 aa24.21■■□□□ 1.47
CTDSP1-202ENST00000428361 WASHC2CQ9Y4E1 1318 aa24.21■■□□□ 1.47
CTDSP1-202ENST00000428361 CEP170BQ9Y4F5 1589 aaPredicted RBP24.2■■□□□ 1.47
CTDSP1-202ENST00000428361 PLA2R1Q13018 1463 aa24.2■■□□□ 1.47
CTDSP1-202ENST00000428361 PKD2Q13563 968 aa24.18■■□□□ 1.46
CTDSP1-202ENST00000428361 PZPP20742 1482 aa24.18■■□□□ 1.46
CTDSP1-202ENST00000428361 EIF2AK4Q9P2K8 1649 aaKnown RBP24.16■■□□□ 1.46
CTDSP1-202ENST00000428361 A2ML1A8K2U0 1454 aa24.15■■□□□ 1.46
CTDSP1-202ENST00000428361 TNRQ92752 1358 aa24.14■■□□□ 1.45
CTDSP1-202ENST00000428361 RNF17Q9BXT8 1623 aaKnown RBP24.13■■□□□ 1.45
CTDSP1-202ENST00000428361 SHANK2Q9UPX8 1470 aa24.13■■□□□ 1.45
CTDSP1-202ENST00000428361 ZC3H13Q5T200 1668 aaKnown RBP24.12■■□□□ 1.45
CTDSP1-202ENST00000428361 DUOX2Q9NRD8 1548 aa24.12■■□□□ 1.45
CTDSP1-202ENST00000428361 PTPN23Q9H3S7 1636 aa24.11■■□□□ 1.45
CTDSP1-202ENST00000428361 TCOF1Q13428 1488 aaKnown RBP24.09■■□□□ 1.45
CTDSP1-202ENST00000428361 IQSEC2Q5JU85 1478 aa24.08■■□□□ 1.45
CTDSP1-202ENST00000428361 NLRP1Q9C000 1473 aa24.08■■□□□ 1.45
CTDSP1-202ENST00000428361 FGD6Q6ZV73 1430 aa24.08■■□□□ 1.44
CTDSP1-202ENST00000428361 NCKAP5LQ9HCH0 1330 aa24.07■■□□□ 1.44
CTDSP1-202ENST00000428361 DNMT1P26358 1616 aaKnown RBP24.06■■□□□ 1.44
CTDSP1-202ENST00000428361 KIF15Q9NS87 1388 aa24.06■■□□□ 1.44
CTDSP1-202ENST00000428361 CROCC2H7BZ55 1655 aa24.06■■□□□ 1.44
CTDSP1-202ENST00000428361 ERBINQ96RT1 1412 aa24.06■■□□□ 1.44
CTDSP1-202ENST00000428361 ABCC3O15438 1527 aa24.05■■□□□ 1.44
CTDSP1-202ENST00000428361 ABCC5O15440 1437 aa24.05■■□□□ 1.44
CTDSP1-202ENST00000428361 FBXO31Q5XUX0 539 aaPredicted RBP24.05■■□□□ 1.44
CTDSP1-202ENST00000428361 LTBP4Q8N2S1 1624 aa24.03■■□□□ 1.44
CTDSP1-202ENST00000428361 DAPK1P53355 1430 aa24.03■■□□□ 1.44
CTDSP1-202ENST00000428361 THEMISQ8N1K5 641 aaPredicted RBP24.03■■□□□ 1.44
CTDSP1-202ENST00000428361 ANKRD30AQ9BXX3 1397 aa24■■□□□ 1.43
CTDSP1-202ENST00000428361 UGGT1Q9NYU2 1555 aa23.99■■□□□ 1.43
CTDSP1-202ENST00000428361 ANKLE2Q86XL3 938 aa23.98■■□□□ 1.43
CTDSP1-202ENST00000428361 RRP7BPQ9NSQ0 103 aa23.98■■□□□ 1.43
CTDSP1-202ENST00000428361 PRDM15P57071 1507 aaPredicted RBP23.98■■□□□ 1.43
CTDSP1-202ENST00000428361 SPATA31D1Q6ZQQ2 1576 aa23.98■■□□□ 1.43
CTDSP1-202ENST00000428361 MROH1Q8NDA8 1641 aa23.98■■□□□ 1.43
CTDSP1-202ENST00000428361 POLR1AO95602 1720 aaPredicted RBP23.97■■□□□ 1.43
CTDSP1-202ENST00000428361 KANK1Q14678 1352 aa23.97■■□□□ 1.43
CTDSP1-202ENST00000428361 ERVK-7P63135 1459 aa23.95■■□□□ 1.42
CTDSP1-202ENST00000428361 ZNF335Q9H4Z2 1342 aaPredicted RBP23.94■■□□□ 1.42
CTDSP1-202ENST00000428361 ARHGAP31Q2M1Z3 1444 aa23.93■■□□□ 1.42
CTDSP1-202ENST00000428361 CEP152O94986 1710 aa23.93■■□□□ 1.42
CTDSP1-202ENST00000428361 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.91■■□□□ 1.428e-9■■■■■ 56.5
CTDSP1-202ENST00000428361 DEPDC5O75140 1603 aa23.91■■□□□ 1.42
CTDSP1-202ENST00000428361 FAM50AQ14320 339 aaKnown RBP23.89■■□□□ 1.41
CTDSP1-202ENST00000428361 ADGRL2O95490 1459 aa23.88■■□□□ 1.41
CTDSP1-202ENST00000428361 NEURL4Q96JN8 1562 aa23.88■■□□□ 1.41
CTDSP1-202ENST00000428361 CHIC2Q9UKJ5 165 aa23.88■■□□□ 1.41
CTDSP1-202ENST00000428361 MED14O60244 1454 aa23.87■■□□□ 1.41
CTDSP1-202ENST00000428361 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.87■■□□□ 1.414e-17■□□□□ 10.2
CTDSP1-202ENST00000428361 CPS1P31327 1500 aa23.87■■□□□ 1.41
CTDSP1-202ENST00000428361 NPHP4O75161 1426 aaPredicted RBP23.85■■□□□ 1.41
CTDSP1-202ENST00000428361 LMTK2Q8IWU2 1503 aa23.84■■□□□ 1.41
CTDSP1-202ENST00000428361 CFAP65Q6ZU64 1925 aaKnown RBP23.81■■□□□ 1.4
CTDSP1-202ENST00000428361 IQGAP1P46940 1657 aa23.8■■□□□ 1.4
CTDSP1-202ENST00000428361 UBAP1LF5GYI3 381 aa23.8■■□□□ 1.4
CTDSP1-202ENST00000428361 UBR1Q8IWV7 1749 aa23.79■■□□□ 1.4
CTDSP1-202ENST00000428361 VWDEQ8N2E2 1590 aa23.79■■□□□ 1.4
CTDSP1-202ENST00000428361 ANKRD50Q9ULJ7 1429 aa23.79■■□□□ 1.4
CTDSP1-202ENST00000428361 SCAF11Q99590 1463 aaKnown RBP23.77■■□□□ 1.4
CTDSP1-202ENST00000428361 STAG3Q9UJ98 1225 aa23.77■■□□□ 1.4
CTDSP1-202ENST00000428361 EID1Q9Y6B2 187 aa23.77■■□□□ 1.4
CTDSP1-202ENST00000428361 SLIT1O75093 1534 aa23.75■■□□□ 1.39
CTDSP1-202ENST00000428361 EFCAB6Q5THR3 1501 aa23.74■■□□□ 1.39
CTDSP1-202ENST00000428361 KDM5AP29375 1690 aaKnown RBP23.74■■□□□ 1.39
CTDSP1-202ENST00000428361 RPRD2Q5VT52 1461 aaKnown RBP23.74■■□□□ 1.39
CTDSP1-202ENST00000428361 ARHGAP23Q9P227 1491 aa23.74■■□□□ 1.39
CTDSP1-202ENST00000428361 TOM1O60784 492 aa23.73■■□□□ 1.39
CTDSP1-202ENST00000428361 ROCK1Q13464 1354 aa23.72■■□□□ 1.39
CTDSP1-202ENST00000428361 TXNDC2Q86VQ3 553 aa23.71■■□□□ 1.39
CTDSP1-202ENST00000428361 PIK3C2BO00750 1634 aa23.7■■□□□ 1.39
CTDSP1-202ENST00000428361 SLC52A1Q9NWF4 448 aa23.7■■□□□ 1.38
CTDSP1-202ENST00000428361 NOS1P29475 1434 aa23.69■■□□□ 1.38
CTDSP1-202ENST00000428361 TMEM2Q9UHN6 1383 aa23.68■■□□□ 1.38
CTDSP1-202ENST00000428361 SYNMO15061 1565 aa23.67■■□□□ 1.38
CTDSP1-202ENST00000428361 TET3O43151 1660 aa23.65■■□□□ 1.38
CTDSP1-202ENST00000428361 IDI1Q13907 227 aa23.65■■□□□ 1.38
CTDSP1-202ENST00000428361 DISP3Q9P2K9 1392 aa23.65■■□□□ 1.38
CTDSP1-202ENST00000428361 LTKP29376 864 aa23.64■■□□□ 1.37
CTDSP1-202ENST00000428361 UNC13BO14795 1591 aa23.64■■□□□ 1.37
CTDSP1-202ENST00000428361 ADGRB3O60242 1522 aa23.63■■□□□ 1.37
CTDSP1-202ENST00000428361 SCAF1Q9H7N4 1312 aaKnown RBP23.62■■□□□ 1.37
CTDSP1-202ENST00000428361 GCC2Q8IWJ2 1684 aa23.61■■□□□ 1.37
CTDSP1-202ENST00000428361 HDGFP51858 240 aaKnown RBP23.6■■□□□ 1.37
CTDSP1-202ENST00000428361 LRRC7Q96NW7 1537 aa23.59■■□□□ 1.37
CTDSP1-202ENST00000428361 PIP4K2BP78356 416 aa23.58■■□□□ 1.37
CTDSP1-202ENST00000428361 IQGAP3Q86VI3 1631 aa23.55■■□□□ 1.36
CTDSP1-202ENST00000428361 ITGAEP38570 1179 aa23.55■■□□□ 1.36
CTDSP1-202ENST00000428361 STRCP1A6NGW2 1772 aa23.54■■□□□ 1.36
CTDSP1-202ENST00000428361 NUP155O75694 1391 aa23.52■■□□□ 1.36
CTDSP1-202ENST00000428361 PPP1R15AO75807 674 aaPredicted RBP23.5■■□□□ 1.35
CTDSP1-202ENST00000428361 PPARGC1BQ86YN6 1023 aaKnown RBP23.5■■□□□ 1.35
CTDSP1-202ENST00000428361 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.5■■□□□ 1.35
CTDSP1-202ENST00000428361 BCANQ96GW7 911 aa23.5■■□□□ 1.35
CTDSP1-202ENST00000428361 KCNA6P17658 529 aa23.49■■□□□ 1.35
CTDSP1-202ENST00000428361 RRBP1Q9P2E9 1410 aaKnown RBP23.49■■□□□ 1.35
CTDSP1-202ENST00000428361 E9PCH4 1651 aa23.48■■□□□ 1.35
CTDSP1-202ENST00000428361 HSPA1LP34931 641 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms